Data search
Results for MligTC455_06481
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_06481 | 38 | 0.79 | Mlig455_038885 | Neo: - Age: - Regeneration-upregulated R2: 5.609 Regeneration-enriched R2: 5.609 |
Mlig455_038885 {REF} {Length: 2284} {NoTransDecoderORF} {RNA1509_51783} {RNA1310_39393} {RNA815_40122} |
Cumulative graph for MligTC455_06481
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.171 | 1.246 | 0.99954 | 1.00000 | |
| RegionR2 | 0.026 | 1.246 | 0.98138 | 1.00000 | |
| RegionR3 | 0.963 | 1.246 | 0.32721 | 0.86549 | |
| RegionR4 | -0.114 | 1.246 | 0.78274 | 1.00000 | |
| RegionR5 | -1.273 | 1.246 | 0.94093 | 1.00000 | |
| RegionR6 | -0.099 | 1.246 | 0.73337 | 1.00000 | |
| RegionR7 | -1.313 | 1.246 | 0.99976 | 1.00000 | |
| RegionR8 | 3.981 | 1.246 | 0.04340 | 0.40849 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 2.741 | 1.246 | 0.99988 | 1.00000 | |
| RegenerationR2 | 5.609 | 1.246 | 0.00001 | 0.00280 | Specific for R2: 5.609 |
| RegenerationR3 | 3.842 | 1.246 | 0.00277 | 0.09207 | |
| RegenerationR4 | 2.652 | 1.246 | 0.06214 | 0.39919 | |
| RegenerationR5 | 3.648 | 1.246 | 0.00276 | 0.09296 | |
| RegenerationR6 | 4.475 | 1.246 | 0.00169 | 0.04593 | |
| RegenerationBL | -0.503 | 1.246 | 0.99955 | 1.00000 | |
| RegenerationTP | 3.498 | 1.246 | 0.05602 | 0.38510 |
Genes with expression patterns similar to MligTC455_06481
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_06481 | 38 | 0.79 | Mlig455_038885 | Neo: - Age: - Regeneration-upregulated R2: 5.609 Regeneration-enriched R2: 5.609 |
3 | 1.000 | - | - | - | 1.000 | 1.000 | Mlig455_038885 {REF} {Length: 2284} {NoTransDecoderORF} {RNA1509_51783} {RNA1310_39393} {RNA815_40122} | |
| 2. | MligTC455_57023 | 35 | 0.72 | Mlig455_025177 | Neo: - Age: - |
1.676 | - | - | - | - | 0.952 | 0.724 | Mlig455_025177 {REF} {Length: 323} {NoTransDecoderORF} {RNA1509_16128} {RNA1310_99479.1} {RNA815_29511.2} | |
| 3. | MligTC455_32401 | 14 | 0.29 | Mlig455_041339, Mlig455_045291 | Neo: - Age: - |
RTL1 | 0.976 | - | - | - | - | 0.976 | - | Mlig455_041339 {REF} {Length: 1735} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=26.5]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=62.4, Expect=7e-11]} {RNA1509_23603} {RNA1310_89790} {RNA815_27316} Mlig455_045291 {REF} {Length: 4056} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=113.3]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=112.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=94.5]; Integrase zinc binding domain [PF17921.3, score=59.2]; Integrase core domain [PF00665.28, score=34.3]; H2C2 zinc finger [PF09337.12, score=27.4]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=118, Expect=3e-26]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=400, Expect=6e-123]} {RNA1509_23603} {RNA1310_89790} {RNA815_8663} |
| 4. | MligTC455_06453 | 157 | 3.27 | Mlig455_025541, Mlig455_025558 | Neo: - Age: - |
0.963 | - | - | - | - | - | 0.963 | Mlig455_025541 {REF} {Length: 1381} {RNA1310_109111} Mlig455_025558 {REF} {Length: 1263} {RNA1310_109111} |
|
| 5. | MligTC455_39365 | 88 | 1.84 | Mlig455_017196 | Neo: - Age: - |
0.958 | - | - | - | - | 0.958 | - | Mlig455_017196 {REF} {Length: 2469} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=26.8]} {RNA1310_52319.1} {RNA815_17448} | |
| 6. | MligTC455_18649 | 30 | 0.62 | Mlig455_035441 | Neo: - Age: logFC(26M/2M)=0.426 |
TNNT3 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_035441 {REF} {Length: 1447} {Pfam: Troponin [PF00992.22, score=40.8]} {Human: ENSG00000130595, TNNT3, troponin T3, fast skeletal type, [RH, Score=62.8, Expect=8e-11]; ENSG00000118194, TNNT2, troponin T2, cardiac type, [RH, Score=61.6, Expect=3e-10]} {Mouse: ENSMUSG00000026414, Tnnt2, troponin T2, cardiac, [RH, Score=64.7, Expect=2e-11]} {Dmel: FBgn0004169, up, upheld, [Score=120, Expect=9e-31]} {Celegans: WBGene00006587, tnt-2, TropoNin T, [Score=90.1, Expect=8e-20]} {Smed: dd_Smed_v6_375_0_1, dd_Smed_v6_375_0_1, [RH, Score=258, Expect=2e-84]} {RNA1509_55821} {RNA1310_24395} {RNA815_14986} |
| 7. | MligTC455_45968 | 43 | 0.89 | Mlig455_058916 | Neo: - Age: - |
0.956 | - | - | - | - | 0.956 | - | Mlig455_058916 {REF} {Length: 3026} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=53.9]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=29.4]} {Smed: dd_Smed_v6_27761_0_1, dd_Smed_v6_27761_0_1, [RH, Score=105, Expect=7e-25]} {RNA1310_38706} | |
| 8. | MligTC455_01654 | 34 | 0.71 | Mlig455_025189 | Neo: - Age: - |
0.952 | - | - | - | - | 0.952 | - | Mlig455_025189 {REF} {Length: 577} {NoTransDecoderORF} {RNA1509_16128} {RNA1310_76847} {RNA815_29511.2} | |
| 9. | MligTC455_38329 | 50 | 1.04 | Mlig455_019403 | Neo: - Age: - |
0.95 | - | - | - | - | 0.950 | - | Mlig455_019403 {REF} {Length: 900} {NoTransDecoderORF} {RNA1310_37493} {RNA815_10997.2} |
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