TomoSeq data search

Data search

Results for MligTC455_06839

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_06839	19	0.39	Mlig455_027238	Neo: - Age: -		Mlig455_027238 {REF} {Length: 187} {NoTransDecoderORF}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_06839

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.713	0.848	0.99983	1.00000
RegionR2	1.295	0.848	0.49149	0.87256
RegionR3	2.058	0.848	0.36443	0.89898
RegionR4	-0.654	0.848	0.99979	1.00000
RegionR5	-0.403	0.848	0.99971	1.00000
RegionR6	1.352	0.848	0.36270	0.94477
RegionR7	-0.926	0.848	0.99978	1.00000
RegionR8	-1.008	0.848	0.99953	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.477	0.848	0.99979	1.00000
RegenerationR2	0.056	0.848	0.99569	1.00000
RegenerationR3	0.338	0.848	0.64086	0.92521
RegenerationR4	3.009	0.848	0.28003	0.72495
RegenerationR5	2.758	0.848	0.28766	0.71558
RegenerationR6	-2.513	0.848	0.40428	0.74054
RegenerationBL	2.826	0.848	0.35525	0.72370
RegenerationTP	-0.393	0.848	0.99982	1.00000

Genes with expression patterns similar to MligTC455_06839

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_06839	19	0.39	Mlig455_027238	Neo: - Age: -		2	-	-	-	-	1.000	1.000	Mlig455_027238 {REF} {Length: 187} {NoTransDecoderORF}
2.	MligTC455_29132	93	1.93	Mlig455_065718	Neo: - Age: Up-Down-Up		0.955	-	-	-	-	0.955	-	Mlig455_065718 {REF} {Length: 4874} {Pfam: Fibronectin type III domain [PF00041.23, score=32.7]; 50S ribosome-binding GTPase [PF01926.25, score=24.0]; AIG1 family [PF04548.18, score=23.7]; AAA ATPase domain [PF13191.8, score=23.7]; Septin [PF00735.20, score=19.8]; RsgA GTPase [PF03193.18, score=19.8]} {RNA1509_41954} {RNA1310_1363.1, RNA1509_41954} {RNA1509_41954, RNA815_1248}
3.	MligTC455_23654	191	3.98	Mlig455_018002	Neo: - Age: - Region-enriched R5: 1.946/0.00166	SPDYC	0.95	-	-	-	-	0.950	-	Mlig455_018002 {REF} {Length: 1725} {TRANSSPLICED} {Pfam: Cell cycle regulatory protein [PF11357.10, score=101.1]} {Human: ENSG00000204710, SPDYC, speedy/RINGO cell cycle regulator family member C, [RH, Score=92.0, Expect=1e-20]; ENSG00000163806, SPDYA, speedy/RINGO cell cycle regulator family member A, [RH, Score=87.8, Expect=4e-19]} {Mouse: ENSMUSG00000052525, Spdya, speedy/RINGO cell cycle regulator family, member A, [RH, Score=87.4, Expect=4e-19]} {Smed: dd_Smed_v6_29468_0_1, dd_Smed_v6_29468_0_1, [RH, Score=102, Expect=9e-25]} {RNA1509_12112} {RNA1310_23429, RNA1509_12112} {RNA1509_12112, RNA815_28518}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_06839

0.39

Mlig455_027238

Neo: -

Age: -

1.000

Mlig455_027238 {REF} {Length: 187} {NoTransDecoderORF}

MligTC455_29132

1.93

Mlig455_065718

Neo: -

Age: Up-Down-Up

0.955

Mlig455_065718 {REF} {Length: 4874} {Pfam: Fibronectin type III domain [PF00041.23, score=32.7]; 50S ribosome-binding GTPase [PF01926.25, score=24.0]; AIG1 family [PF04548.18, score=23.7]; AAA ATPase domain [PF13191.8, score=23.7]; Septin [PF00735.20, score=19.8]; RsgA GTPase [PF03193.18, score=19.8]} {RNA1509_41954} {RNA1310_1363.1, RNA1509_41954} {RNA1509_41954, RNA815_1248}

MligTC455_23654

191

3.98

Mlig455_018002

Neo: -

Age: -

Region-enriched R5: 1.946/0.00166

SPDYC

0.95

0.950

Mlig455_018002 {REF} {Length: 1725} {TRANSSPLICED} {Pfam: Cell cycle regulatory protein [PF11357.10, score=101.1]} {Human: ENSG00000204710, SPDYC, speedy/RINGO cell cycle regulator family member C, [RH, Score=92.0, Expect=1e-20]; ENSG00000163806, SPDYA, speedy/RINGO cell cycle regulator family member A, [RH, Score=87.8, Expect=4e-19]} {Mouse: ENSMUSG00000052525, Spdya, speedy/RINGO cell cycle regulator family, member A, [RH, Score=87.4, Expect=4e-19]} {Smed: dd_Smed_v6_29468_0_1, dd_Smed_v6_29468_0_1, [RH, Score=102, Expect=9e-25]} {RNA1509_12112} {RNA1310_23429, RNA1509_12112} {RNA1509_12112, RNA815_28518}