Data search


search
Exact
Search

Results for MligTC455_07068

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_07068 455 9.49 Mlig455_000783

Neo: -

Age: -

Mlig455_000783 {REF} {Length: 1674} {RNA1509_15117} {RNA1310_6607} {RNA815_24155.1}

Cumulative graph for MligTC455_07068

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.718 3.65 0.52066 1.00000
RegionR2 0.455 3.65 0.39125 0.78606
RegionR3 0.369 3.65 0.32833 0.86688
RegionR4 0.002 3.65 0.98792 1.00000
RegionR5 0.6 3.65 0.07084 0.24030
RegionR6 0.119 3.65 0.76891 1.00000
RegionR7 -1.559 3.65 0.02399 0.28959
RegionR8 -0.704 3.65 0.35206 0.98553

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.785 3.65 0.59852 1.00000
RegenerationR2 0.039 3.65 0.92274 1.00000
RegenerationR3 -0.22 3.65 0.62705 0.91896
RegenerationR4 0.34 3.65 0.47801 0.85754
RegenerationR5 -0.068 3.65 0.86507 1.00000
RegenerationR6 0.011 3.65 0.97857 1.00000
RegenerationBL 0.264 3.65 0.74200 1.00000
RegenerationTP -0.346 3.65 0.69133 1.00000


Genes with expression patterns similar to MligTC455_07068

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_07068 455 9.49 Mlig455_000783

Neo: -

Age: -

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_000783 {REF} {Length: 1674} {RNA1509_15117} {RNA1310_6607} {RNA815_24155.1}
2. MligTC455_09924 1115 23.24 Mlig455_045933

Neo: Int S/G2/M

Age: Up-Down-Down

NDUFB5 1.814 - - 0.852 - 0.962 - Mlig455_045933 {REF} {Length: 3965} {TRANSSPLICED} {Pfam: NADH:ubiquinone oxidoreductase, NDUFB5/SGDH subunit [PF09781.11, score=130.0]} {Human: ENSG00000136521, NDUFB5, NADH:ubiquinone oxidoreductase subunit B5, [RH, Score=79.3, Expect=1e-17]} {Dmel: FBgn0011455, ND-SGDH, NADH dehydrogenase (ubiquinone) SGDH subunit, [RH, Score=119, Expect=4e-33]} {Smed: dd_Smed_v6_3120_0_1, dd_Smed_v6_3120_0_1, [RH, Score=93.6, Expect=2e-23]} {RNA1509_13244, RNA1509_27121, RNA1509_43622, RNA1509_44707, RNA1509_53197, RNA1509_8322} {RNA1310_34878, RNA1509_13244, RNA1509_27121, RNA1509_43622, RNA1509_44707, RNA1509_53197, RNA1509_8322} {RNA1509_13244, RNA1509_27121, RNA1509_43622, RNA1509_44707, RNA1509_53197, RNA1509_8322, RNA815_15720}
3. MligTC455_53754 115 2.4 Mlig455_024839

Neo: -

Age: Up-Down-Up

0.959 - - - - 0.959 - Mlig455_024839 {REF} {Length: 1320} {RNA1509_59821} {RNA1310_48789} {RNA815_57181}
4. MligTC455_50958 1177 24.52 Mlig455_045565

Neo: Int S/G2/M

Age: Down-Up-Down, logFC(26M/2M)=0.284

Region-enriched R4: 1.186/0.01823

TBCB 0.955 - - - - - 0.955 Mlig455_045565 {REF} {Length: 1258} {Pfam: Ubiquitin-like domain [PF14560.8, score=98.0]; CAP-Gly domain [PF01302.27, score=85.3]} {Human: ENSG00000105254, TBCB, tubulin folding cofactor B, [RH, Score=216, Expect=5e-70]} {Mouse: ENSMUSG00000006095, Tbcb, tubulin folding cofactor B, [RH, Score=216, Expect=4e-70]} {Dmel: FBgn0034451, TBCB, tubulin-binding cofactor B, [RH, Score=168, Expect=2e-51]} {Celegans: WBGene00009987, tbcb-1, Tubulin-specific chaperone B, [RH, Score=201, Expect=1e-64]} {Smed: dd_Smed_v6_3380_0_1, dd_Smed_v6_3380_0_1, [RH, Score=246, Expect=3e-82]} {RNA1509_35268, RNA1509_39279} {RNA1310_31972.2, RNA1509_35268, RNA1509_39279} {RNA1509_35268, RNA1509_39279, RNA815_12848.1}
5. MligTC455_31514 4359 90.81 Mlig455_031839

Neo: -

Age: logFC(26M/2M)=-0.154

ACO2 0.951 - - - - 0.951 - Mlig455_031839 {REF} {Length: 3664} {TRANSSPLICED} {Pfam: Aconitase family (aconitate hydratase) [PF00330.22, score=511.8]; Aconitase C-terminal domain [PF00694.21, score=145.7]} {Human: ENSG00000100412, ACO2, aconitase 2, [RH, Score=1147, Expect=0.0]} {Mouse: ENSMUSG00000022477, Aco2, aconitase 2, mitochondrial, [RH, Score=1151, Expect=0.0]} {Dmel: FBgn0010100, Acon, Aconitase, [RH, Score=1150, Expect=0.0]} {Celegans: WBGene00000041, aco-2, Probable aconitate hydratase, mitochondrial, [RH, Score=1148, Expect=0.0]} {Smed: dd_Smed_v6_979_0_1, dd_Smed_v6_979_0_1, [RH, Score=1154, Expect=0.0]} {RNA1509_2297, RNA1509_349} {RNA1310_3217.1, RNA1509_2297, RNA1509_349} {RNA1509_2297, RNA1509_349, RNA815_1749}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA