Data search


search
Exact
Search

Results for MligTC455_07097

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_07097 17 0.35 Mlig455_070952

Neo: -

Age: -

Mlig455_070952 {REF} {Length: 767} {NoTransDecoderORF} {RNA1509_50041} {RNA1310_130602} {RNA815_252.5}

Cumulative graph for MligTC455_07097

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.637 0.704 0.99998 1.00000
RegionR2 2.309 0.704 0.99992 1.00000
RegionR3 -0.055 0.704 0.99994 1.00000
RegionR4 -2.668 0.704 0.99978 1.00000
RegionR5 -1.263 0.704 0.99990 1.00000
RegionR6 -0.584 0.704 0.99994 1.00000
RegionR7 1.352 0.704 0.99998 1.00000
RegionR8 2.544 0.704 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.278 0.704 0.99997 1.00000
RegenerationR2 1.423 0.704 0.99989 1.00000
RegenerationR3 1.248 0.704 1.00000 1.00000
RegenerationR4 1.597 0.704 1.00000 1.00000
RegenerationR5 1.502 0.704 0.99958 1.00000
RegenerationR6 2.901 0.704 1.00000 1.00000
RegenerationBL -2.747 0.704 0.99989 1.00000
RegenerationTP -1.805 0.704 0.99992 1.00000


Genes with expression patterns similar to MligTC455_07097

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_07097 17 0.35 Mlig455_070952

Neo: -

Age: -

1 - - - - 1.000 - Mlig455_070952 {REF} {Length: 767} {NoTransDecoderORF} {RNA1509_50041} {RNA1310_130602} {RNA815_252.5}
2. MligTC455_34608 166 3.46 Mlig455_040598, Mlig455_040609, Mlig455_062035

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.646

ANK1, ANKRD44 0.977 - - - - 0.977 -

Mlig455_040598 {REF} {Length: 1201} {RNA1310_15752.1} {RNA815_13198}

Mlig455_040609 {REF} {Length: 6223} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=316.5]; Ankyrin repeats (many copies) [PF13637.8, score=308.7]; Ankyrin repeat [PF13606.8, score=196.4]; Ankyrin repeat [PF00023.32, score=180.0]; Ankyrin repeats (many copies) [PF13857.8, score=178.3]} {Human: ENSG00000065413, ANKRD44, ankyrin repeat domain 44, [Score=169, Expect=3e-42]; ENSG00000139645, ANKRD52, ankyrin repeat domain 52, [Score=166, Expect=2e-41]; ENSG00000145362, ANK2, ankyrin 2, [Score=165, Expect=1e-40]} {Mouse: ENSMUSG00000052331, Ankrd44, ankyrin repeat domain 44, [Score=173, Expect=1e-43]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=181, Expect=1e-45]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=145, Expect=8e-35]} {Smed: dd_Smed_v6_7952_0_1, dd_Smed_v6_7952_0_1, [Score=157, Expect=9e-39]} {RNA1509_29695} {RNA1310_10254} {RNA815_10548}

Mlig455_062035 {REF} {Length: 6483} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=227.2]; Ankyrin repeats (many copies) [PF13637.8, score=214.4]; Ankyrin repeat [PF13606.8, score=143.3]; Ankyrin repeat [PF00023.32, score=135.0]; Ankyrin repeats (many copies) [PF13857.8, score=127.0]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=145, Expect=4e-35]; ENSG00000145362, ANK2, ankyrin 2, [Score=142, Expect=3e-34]; ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=140, Expect=2e-33]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=148, Expect=5e-36]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=141, Expect=4e-34]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=144, Expect=9e-35]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=132, Expect=4e-31]} {Smed: dd_Smed_v6_10835_0_2, dd_Smed_v6_10835_0_2, [Score=132, Expect=2e-31]} {RNA1509_29695} {RNA1310_10254} {RNA815_10548}
3. MligTC455_34331 94 1.95 Mlig455_008272, Mlig455_015962, Mlig455_032570, Mlig455_033195

Neo: -

Age: -

0.963 - - - - 0.963 -

Mlig455_008272 {REF} {Length: 823} {NoTransDecoderORF} {RNA1310_129992} {RNA815_38794.1}

Mlig455_015962 {REF} {Length: 3178} {Pfam: Coiled-coil region of CCDC155 or KASH [PF14662.8, score=23.3]; Filament-like plant protein, long coiled-coil [PF05911.13, score=17.0]} {RNA1310_17352.1} {RNA815_9324.1}

Mlig455_032570 {REF} {Length: 263} {NoTransDecoderORF} {RNA1310_129992} {RNA815_38794.1}

Mlig455_033195 {REF} {Length: 272} {NoTransDecoderORF} {RNA1310_129992} {RNA815_38794.1}
4. MligTC455_35975 101 2.09 Mlig455_051782

Neo: -

Age: -

Region-enriched R2: 3.403/0.02949

DAPK3 0.96 - - - - 0.960 - Mlig455_051782 {REF} {Length: 1631} {Pfam: Protein kinase domain [PF00069.27, score=91.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=32.1]; Phosphotransferase enzyme family [PF01636.25, score=26.6]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=18.9]} {Human: ENSG00000167657, DAPK3, death associated protein kinase 3, [Score=79.0, Expect=3e-16]; ENSG00000183765, CHEK2, checkpoint kinase 2, [Score=79.0, Expect=1e-16]; ENSG00000035664, DAPK2, death associated protein kinase 2, [Score=77.4, Expect=9e-16]} {Mouse: ENSMUSG00000016179, Camk1g, calcium/calmodulin-dependent protein kinase I gamma, [Score=78.2, Expect=3e-16]; ENSMUSG00000028078, Dclk2, doublecortin-like kinase 2, [Score=75.5, Expect=4e-15]; ENSMUSG00000024617, Camk2a, calcium/calmodulin-dependent protein kinase II alpha, [Score=74.7, Expect=8e-15]} {Dmel: FBgn0264607, CaMKII, Calcium/calmodulin-dependent protein kinase II, [Score=73.2, Expect=2e-14]} {Celegans: WBGene00000553, cmk-1, Calcium/calmodulin-dependent protein kinase type 1, [Score=73.6, Expect=6e-15]} {Smed: dd_Smed_v6_5783_0_1, dd_Smed_v6_5783_0_1, [Score=77.4, Expect=2e-16]} {RNA1310_34205} {RNA815_32336}
5. MligTC455_31075 58 1.2 Mlig455_061398

Neo: -

Age: -

MAN2C1 0.959 - - - - 0.959 - Mlig455_061398 {REF} {Length: 5189} {TRANSSPLICED} {Pfam: Glycosyl hydrolases family 38 N-terminal domain [PF01074.24, score=254.6]; Glycosyl hydrolases family 38 C-terminal domain [PF07748.15, score=93.7]; Alpha mannosidase middle domain [PF09261.13, score=68.0]} {Human: ENSG00000140400, MAN2C1, mannosidase alpha class 2C member 1, [RH, Score=614, Expect=0.0]} {Mouse: ENSMUSG00000032295, Man2c1, mannosidase, alpha, class 2C, member 1, [RH, Score=606, Expect=0.0]} {Smed: dd_Smed_v6_7449_0_11, dd_Smed_v6_7449_0_11, [RH, Score=733, Expect=0.0]} {RNA1509_13703} {RNA1310_2504.1} {RNA815_715}
6. MligTC455_32326 37 0.77 Mlig455_001525

Neo: -

Age: -

TRIM9 0.957 - - - - 0.957 - Mlig455_001525 {REF} {Length: 3229} {Pfam: SPRY domain [PF00622.30, score=48.4]; B-box zinc finger [PF00643.26, score=33.5]; zinc finger of C3HC4-type, RING [PF15227.8, score=28.5]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=28.1]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=25.4]; RING-type zinc-finger [PF13445.8, score=24.0]; Fibronectin type III domain [PF00041.23, score=23.3]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=21.4]; Prokaryotic RING finger family 4 [PF14447.8, score=18.8]} {Human: ENSG00000100505, TRIM9, tripartite motif containing 9, [Score=475, Expect=2e-158]} {Mouse: ENSMUSG00000021071, Trim9, tripartite motif-containing 9, [Score=474, Expect=3e-158]} {Dmel: FBgn0051721, Trim9, Tripartite motif containing 9, [Score=444, Expect=1e-146]} {Celegans: WBGene00016539, madd-2, [Score=409, Expect=1e-132]} {Smed: dd_Smed_v6_8386_0_1, dd_Smed_v6_8386_0_1, [Score=524, Expect=1e-177]} {RNA1509_37451} {RNA1310_8634.1} {RNA815_9833}
7. MligTC455_17040 75 1.57 Mlig455_029809

Neo: -

Age: -

Region-enriched R7: 3.328/0.01605

ARHGAP39 0.955 - - - - 0.955 - Mlig455_029809 {REF} {Length: 3933} {Pfam: MyTH4 domain [PF00784.19, score=92.2]; RhoGAP domain [PF00620.29, score=84.9]} {Human: ENSG00000147799, ARHGAP39, Rho GTPase activating protein 39, [Score=266, Expect=1e-79]} {Mouse: ENSMUSG00000033697, Arhgap39, Rho GTPase activating protein 39, [Score=265, Expect=4e-79]} {Dmel: FBgn0038853, RhoGAP93B, Rho GTPase activating protein at 93B, [Score=221, Expect=1e-63]} {Celegans: WBGene00022365, Y92H12BL.4, [Score=149, Expect=1e-40]} {Smed: dd_Smed_v6_5836_0_1, dd_Smed_v6_5836_0_1, [Score=125, Expect=4e-31]} {RNA1310_44535} {RNA815_34943}
8. MligTC455_36515 487 10.15 Mlig455_024333

Neo: -

Age: -

Regeneration-downregulated BL: -4.316

Regeneration-depleted BL: -4.316

0.955 - - - - 0.955 - Mlig455_024333 {REF} {Length: 839} {RNA1509_48477} {RNA1310_73282, RNA1509_48477} {RNA1509_48477, RNA815_40394}
9. MligTC455_42887 60 1.24 Mlig455_036468, Mlig455_056252

Neo: -

Age: -

CCKAR 0.954 - - - - 0.954 -

Mlig455_036468 {REF} {Length: 2390} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=81.1]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=37.9]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=19.5]} {Human: ENSG00000163394, CCKAR, cholecystokinin A receptor, [Score=53.5, Expect=5e-07]; ENSG00000170425, ADORA2B, adenosine A2b receptor, [Score=53.1, Expect=4e-07]} {Mouse: ENSMUSG00000026237, Nmur1, neuromedin U receptor 1, [Score=59.3, Expect=4e-09]} {Dmel: FBgn0264002, MsR2, Myosuppressin receptor 2, [Score=57.0, Expect=3e-08]} {Celegans: WBGene00016428, dmsr-7, DroMyoSuppressin Receptor related, [Score=68.6, Expect=3e-12]} {Smed: dd_Smed_v6_9550_0_1, dd_Smed_v6_9550_0_1, [Score=69.7, Expect=9e-13]} {RNA1310_37299} {RNA815_29990}

Mlig455_056252 {REF} {Length: 2265} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=22.8]} {RNA1310_56612} {RNA815_44133}
10. MligTC455_31130 23 0.47 Mlig455_029647, Mlig455_052260, Mlig455_054234

Neo: -

Age: -

NYNRIN 0.953 - - - - 0.953 -

Mlig455_029647 {REF} {Length: 917} {Pfam: gag-polyprotein putative aspartyl protease [PF13975.8, score=30.6]; Aspartyl protease [PF13650.8, score=27.6]} {RNA1509_30575} {RNA1310_1140.1} {RNA815_993.1}

Mlig455_052260 {REF} {Length: 4476} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=124.2]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=118.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=78.6]; Integrase zinc binding domain [PF17921.3, score=67.8]; Integrase core domain [PF00665.28, score=51.2]; gag-polyprotein putative aspartyl protease [PF13975.8, score=30.2]; Aspartyl protease [PF13650.8, score=27.7]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=93.2, Expect=3e-18]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=454, Expect=1e-139]} {RNA1509_29748} {RNA1310_870} {RNA815_993.1}

Mlig455_054234 {REF} {Length: 1574} {Pfam: Integrase zinc binding domain [PF17921.3, score=67.3]; Integrase core domain [PF00665.28, score=51.8]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=95.1, Expect=8e-20]} {Smed: dd_Smed_v6_1574_6_72, dd_Smed_v6_1574_6_72, [Score=189, Expect=7e-54]} {RNA1509_29748} {RNA1310_1140.1} {RNA815_993.1}
11. MligTC455_31617 74 1.55 Mlig455_065879

Neo: Int S/G2/M

Age: -

USP5 0.953 - - - - 0.953 - Mlig455_065879 {REF} {Length: 3844} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=141.8]; Variant UBP zinc finger [PF17807.3, score=79.8]; UBA/TS-N domain [PF00627.33, score=72.9]; Zn-finger in ubiquitin-hydrolases and other protein [PF02148.21, score=55.1]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=37.6]} {Human: ENSG00000111667, USP5, ubiquitin specific peptidase 5, [RH, Score=750, Expect=0.0]} {Mouse: ENSMUSG00000038429, Usp5, ubiquitin specific peptidase 5 (isopeptidase T), [RH, Score=749, Expect=0.0]} {Dmel: FBgn0035402, Usp5, Ubiquitin specific protease 5, [RH, Score=685, Expect=0.0]} {Celegans: WBGene00020839, usp-5, Ubiquitinyl hydrolase 1, [RH, Score=417, Expect=6e-134]} {Smed: dd_Smed_v6_3655_0_1, dd_Smed_v6_3655_0_1, [RH, Score=323, Expect=2e-103]} {RNA1509_3862, RNA1509_49588} {RNA1310_7195.1, RNA1509_49588} {RNA1509_49588, RNA815_2229}
12. MligTC455_35107 518 10.79 Mlig455_022097, Mlig455_053635

Neo: -

Age: -

Region-enriched R6: 2.982/0.00042

0.953 - - - - 0.953 -

Mlig455_022097 {REF} {Length: 2289} {Pfam: Clostridium epsilon toxin ETX/Bacillus mosquitocidal toxin MTX2 [PF03318.15, score=23.5]} {Celegans: WBGene00003010, lin-24, [Score=97.1, Expect=4e-24]} {RNA1509_24923, RNA1509_37147, RNA1509_37737} {RNA1310_12332, RNA1509_37147, RNA1509_37737} {RNA1509_37147, RNA1509_37737, RNA815_6265}

Mlig455_053635 {REF} {Length: 1665} {TRANSSPLICED} {Pfam: Clostridium epsilon toxin ETX/Bacillus mosquitocidal toxin MTX2 [PF03318.15, score=23.4]} {Celegans: WBGene00003010, lin-24, [Score=97.1, Expect=4e-24]} {RNA1509_24923} {RNA1310_12332} {RNA815_6265}
13. MligTC455_36516 495 10.32 Mlig455_032048

Neo: -

Age: -

Regeneration-downregulated BL: -4.315

Regeneration-depleted BL: -4.315

0.953 - - - - 0.953 - Mlig455_032048 {REF} {Length: 2397} {TRANSSPLICED} {Smed: dd_Smed_v6_8694_0_1, dd_Smed_v6_8694_0_1, [RH, Score=74.7, Expect=7e-17]} {RNA1509_19681, RNA1509_42038} {RNA1310_1563, RNA1509_19681, RNA1509_42038} {RNA1509_19681, RNA1509_42038, RNA815_36419}
14. MligTC455_40917 136 2.84 Mlig455_054293, Mlig455_054369

Neo: -

Age: -

0.953 - - - - 0.953 -

Mlig455_054293 {REF} {Length: 451} {NoTransDecoderORF} {RNA1310_68874} {RNA815_30304}

Mlig455_054369 {REF} {Length: 490} {NoTransDecoderORF} {RNA1310_68874} {RNA815_30304}
15. MligTC455_24548 39 0.8 Mlig455_031981

Neo: -

Age: -

ROBO1 0.95 - - - - 0.950 - Mlig455_031981 {REF} {Length: 4163} {Pfam: Immunoglobulin domain [PF13927.8, score=128.2]; Immunoglobulin I-set domain [PF07679.18, score=115.2]; Immunoglobulin domain [PF00047.27, score=78.6]; Immunoglobulin V-set domain [PF07686.19, score=73.6]; Immunoglobulin domain [PF13895.8, score=71.9]; Fibronectin type III domain [PF00041.23, score=22.4]} {Human: ENSG00000169855, ROBO1, roundabout guidance receptor 1, [Score=164, Expect=3e-40]} {Mouse: ENSMUSG00000032128, Robo3, roundabout guidance receptor 3, [Score=133, Expect=6e-31]} {Dmel: FBgn0005631, robo1, roundabout 1, [Score=139, Expect=4e-33]} {Celegans: WBGene00004729, sax-3, [Score=132, Expect=6e-31]} {Smed: dd_Smed_v6_8494_0_1, dd_Smed_v6_8494_0_1, [Score=239, Expect=1e-64]} {RNA1310_122847} {RNA815_62158}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA