Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_07097 | 17 | 0.35 | Mlig455_070952 | Neo: - Age: - |
Mlig455_070952 {REF} {Length: 767} {NoTransDecoderORF} {RNA1509_50041} {RNA1310_130602} {RNA815_252.5} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -1.637 | 0.704 | 0.99998 | 1.00000 | |
RegionR2 | 2.309 | 0.704 | 0.99992 | 1.00000 | |
RegionR3 | -0.055 | 0.704 | 0.99994 | 1.00000 | |
RegionR4 | -2.668 | 0.704 | 0.99978 | 1.00000 | |
RegionR5 | -1.263 | 0.704 | 0.99990 | 1.00000 | |
RegionR6 | -0.584 | 0.704 | 0.99994 | 1.00000 | |
RegionR7 | 1.352 | 0.704 | 0.99998 | 1.00000 | |
RegionR8 | 2.544 | 0.704 | 1.00000 | 1.00000 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | 0.278 | 0.704 | 0.99997 | 1.00000 | |
RegenerationR2 | 1.423 | 0.704 | 0.99989 | 1.00000 | |
RegenerationR3 | 1.248 | 0.704 | 1.00000 | 1.00000 | |
RegenerationR4 | 1.597 | 0.704 | 1.00000 | 1.00000 | |
RegenerationR5 | 1.502 | 0.704 | 0.99958 | 1.00000 | |
RegenerationR6 | 2.901 | 0.704 | 1.00000 | 1.00000 | |
RegenerationBL | -2.747 | 0.704 | 0.99989 | 1.00000 | |
RegenerationTP | -1.805 | 0.704 | 0.99992 | 1.00000 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_07097 | 17 | 0.35 | Mlig455_070952 | Neo: - Age: - |
1 | - | - | - | - | 1.000 | - | Mlig455_070952 {REF} {Length: 767} {NoTransDecoderORF} {RNA1509_50041} {RNA1310_130602} {RNA815_252.5} | |
2. | MligTC455_34608 | 166 | 3.46 | Mlig455_040598, Mlig455_040609, Mlig455_062035 | Neo: - |
ANK1, ANKRD44 | 0.977 | - | - | - | - | 0.977 | - | Mlig455_040598 {REF} {Length: 1201} {RNA1310_15752.1} {RNA815_13198} Mlig455_040609 {REF} {Length: 6223} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=316.5]; Ankyrin repeats (many copies) [PF13637.8, score=308.7]; Ankyrin repeat [PF13606.8, score=196.4]; Ankyrin repeat [PF00023.32, score=180.0]; Ankyrin repeats (many copies) [PF13857.8, score=178.3]} {Human: ENSG00000065413, ANKRD44, ankyrin repeat domain 44, [Score=169, Expect=3e-42]; ENSG00000139645, ANKRD52, ankyrin repeat domain 52, [Score=166, Expect=2e-41]; ENSG00000145362, ANK2, ankyrin 2, [Score=165, Expect=1e-40]} {Mouse: ENSMUSG00000052331, Ankrd44, ankyrin repeat domain 44, [Score=173, Expect=1e-43]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=181, Expect=1e-45]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=145, Expect=8e-35]} {Smed: dd_Smed_v6_7952_0_1, dd_Smed_v6_7952_0_1, [Score=157, Expect=9e-39]} {RNA1509_29695} {RNA1310_10254} {RNA815_10548} Mlig455_062035 {REF} {Length: 6483} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=227.2]; Ankyrin repeats (many copies) [PF13637.8, score=214.4]; Ankyrin repeat [PF13606.8, score=143.3]; Ankyrin repeat [PF00023.32, score=135.0]; Ankyrin repeats (many copies) [PF13857.8, score=127.0]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=145, Expect=4e-35]; ENSG00000145362, ANK2, ankyrin 2, [Score=142, Expect=3e-34]; ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=140, Expect=2e-33]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=148, Expect=5e-36]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=141, Expect=4e-34]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=144, Expect=9e-35]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=132, Expect=4e-31]} {Smed: dd_Smed_v6_10835_0_2, dd_Smed_v6_10835_0_2, [Score=132, Expect=2e-31]} {RNA1509_29695} {RNA1310_10254} {RNA815_10548} |
3. | MligTC455_34331 | 94 | 1.95 | Mlig455_008272, Mlig455_015962, Mlig455_032570, Mlig455_033195 | Neo: - Age: - |
0.963 | - | - | - | - | 0.963 | - | Mlig455_008272 {REF} {Length: 823} {NoTransDecoderORF} {RNA1310_129992} {RNA815_38794.1} Mlig455_015962 {REF} {Length: 3178} {Pfam: Coiled-coil region of CCDC155 or KASH [PF14662.8, score=23.3]; Filament-like plant protein, long coiled-coil [PF05911.13, score=17.0]} {RNA1310_17352.1} {RNA815_9324.1} Mlig455_032570 {REF} {Length: 263} {NoTransDecoderORF} {RNA1310_129992} {RNA815_38794.1} Mlig455_033195 {REF} {Length: 272} {NoTransDecoderORF} {RNA1310_129992} {RNA815_38794.1} |
|
4. | MligTC455_35975 | 101 | 2.09 | Mlig455_051782 | Neo: - Age: - Region-enriched R2: 3.403/0.02949 |
DAPK3 | 0.96 | - | - | - | - | 0.960 | - | Mlig455_051782 {REF} {Length: 1631} {Pfam: Protein kinase domain [PF00069.27, score=91.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=32.1]; Phosphotransferase enzyme family [PF01636.25, score=26.6]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=18.9]} {Human: ENSG00000167657, DAPK3, death associated protein kinase 3, [Score=79.0, Expect=3e-16]; ENSG00000183765, CHEK2, checkpoint kinase 2, [Score=79.0, Expect=1e-16]; ENSG00000035664, DAPK2, death associated protein kinase 2, [Score=77.4, Expect=9e-16]} {Mouse: ENSMUSG00000016179, Camk1g, calcium/calmodulin-dependent protein kinase I gamma, [Score=78.2, Expect=3e-16]; ENSMUSG00000028078, Dclk2, doublecortin-like kinase 2, [Score=75.5, Expect=4e-15]; ENSMUSG00000024617, Camk2a, calcium/calmodulin-dependent protein kinase II alpha, [Score=74.7, Expect=8e-15]} {Dmel: FBgn0264607, CaMKII, Calcium/calmodulin-dependent protein kinase II, [Score=73.2, Expect=2e-14]} {Celegans: WBGene00000553, cmk-1, Calcium/calmodulin-dependent protein kinase type 1, [Score=73.6, Expect=6e-15]} {Smed: dd_Smed_v6_5783_0_1, dd_Smed_v6_5783_0_1, [Score=77.4, Expect=2e-16]} {RNA1310_34205} {RNA815_32336} |
5. | MligTC455_31075 | 58 | 1.2 | Mlig455_061398 | Neo: - Age: - |
MAN2C1 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_061398 {REF} {Length: 5189} {TRANSSPLICED} {Pfam: Glycosyl hydrolases family 38 N-terminal domain [PF01074.24, score=254.6]; Glycosyl hydrolases family 38 C-terminal domain [PF07748.15, score=93.7]; Alpha mannosidase middle domain [PF09261.13, score=68.0]} {Human: ENSG00000140400, MAN2C1, mannosidase alpha class 2C member 1, [RH, Score=614, Expect=0.0]} {Mouse: ENSMUSG00000032295, Man2c1, mannosidase, alpha, class 2C, member 1, [RH, Score=606, Expect=0.0]} {Smed: dd_Smed_v6_7449_0_11, dd_Smed_v6_7449_0_11, [RH, Score=733, Expect=0.0]} {RNA1509_13703} {RNA1310_2504.1} {RNA815_715} |
6. | MligTC455_32326 | 37 | 0.77 | Mlig455_001525 | Neo: - Age: - |
TRIM9 | 0.957 | - | - | - | - | 0.957 | - | Mlig455_001525 {REF} {Length: 3229} {Pfam: SPRY domain [PF00622.30, score=48.4]; B-box zinc finger [PF00643.26, score=33.5]; zinc finger of C3HC4-type, RING [PF15227.8, score=28.5]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=28.1]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=25.4]; RING-type zinc-finger [PF13445.8, score=24.0]; Fibronectin type III domain [PF00041.23, score=23.3]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=21.4]; Prokaryotic RING finger family 4 [PF14447.8, score=18.8]} {Human: ENSG00000100505, TRIM9, tripartite motif containing 9, [Score=475, Expect=2e-158]} {Mouse: ENSMUSG00000021071, Trim9, tripartite motif-containing 9, [Score=474, Expect=3e-158]} {Dmel: FBgn0051721, Trim9, Tripartite motif containing 9, [Score=444, Expect=1e-146]} {Celegans: WBGene00016539, madd-2, [Score=409, Expect=1e-132]} {Smed: dd_Smed_v6_8386_0_1, dd_Smed_v6_8386_0_1, [Score=524, Expect=1e-177]} {RNA1509_37451} {RNA1310_8634.1} {RNA815_9833} |
7. | MligTC455_17040 | 75 | 1.57 | Mlig455_029809 | Neo: - Age: - Region-enriched R7: 3.328/0.01605 |
ARHGAP39 | 0.955 | - | - | - | - | 0.955 | - | Mlig455_029809 {REF} {Length: 3933} {Pfam: MyTH4 domain [PF00784.19, score=92.2]; RhoGAP domain [PF00620.29, score=84.9]} {Human: ENSG00000147799, ARHGAP39, Rho GTPase activating protein 39, [Score=266, Expect=1e-79]} {Mouse: ENSMUSG00000033697, Arhgap39, Rho GTPase activating protein 39, [Score=265, Expect=4e-79]} {Dmel: FBgn0038853, RhoGAP93B, Rho GTPase activating protein at 93B, [Score=221, Expect=1e-63]} {Celegans: WBGene00022365, Y92H12BL.4, [Score=149, Expect=1e-40]} {Smed: dd_Smed_v6_5836_0_1, dd_Smed_v6_5836_0_1, [Score=125, Expect=4e-31]} {RNA1310_44535} {RNA815_34943} |
8. | MligTC455_36515 | 487 | 10.15 | Mlig455_024333 | Neo: - Age: - Regeneration-downregulated BL: -4.316 Regeneration-depleted BL: -4.316 |
0.955 | - | - | - | - | 0.955 | - | Mlig455_024333 {REF} {Length: 839} {RNA1509_48477} {RNA1310_73282, RNA1509_48477} {RNA1509_48477, RNA815_40394} | |
9. | MligTC455_42887 | 60 | 1.24 | Mlig455_036468, Mlig455_056252 | Neo: - Age: - |
CCKAR | 0.954 | - | - | - | - | 0.954 | - | Mlig455_036468 {REF} {Length: 2390} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=81.1]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=37.9]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=19.5]} {Human: ENSG00000163394, CCKAR, cholecystokinin A receptor, [Score=53.5, Expect=5e-07]; ENSG00000170425, ADORA2B, adenosine A2b receptor, [Score=53.1, Expect=4e-07]} {Mouse: ENSMUSG00000026237, Nmur1, neuromedin U receptor 1, [Score=59.3, Expect=4e-09]} {Dmel: FBgn0264002, MsR2, Myosuppressin receptor 2, [Score=57.0, Expect=3e-08]} {Celegans: WBGene00016428, dmsr-7, DroMyoSuppressin Receptor related, [Score=68.6, Expect=3e-12]} {Smed: dd_Smed_v6_9550_0_1, dd_Smed_v6_9550_0_1, [Score=69.7, Expect=9e-13]} {RNA1310_37299} {RNA815_29990} Mlig455_056252 {REF} {Length: 2265} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=22.8]} {RNA1310_56612} {RNA815_44133} |
10. | MligTC455_31130 | 23 | 0.47 | Mlig455_029647, Mlig455_052260, Mlig455_054234 | Neo: - Age: - |
NYNRIN | 0.953 | - | - | - | - | 0.953 | - | Mlig455_029647 {REF} {Length: 917} {Pfam: gag-polyprotein putative aspartyl protease [PF13975.8, score=30.6]; Aspartyl protease [PF13650.8, score=27.6]} {RNA1509_30575} {RNA1310_1140.1} {RNA815_993.1} Mlig455_052260 {REF} {Length: 4476} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=124.2]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=118.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=78.6]; Integrase zinc binding domain [PF17921.3, score=67.8]; Integrase core domain [PF00665.28, score=51.2]; gag-polyprotein putative aspartyl protease [PF13975.8, score=30.2]; Aspartyl protease [PF13650.8, score=27.7]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=93.2, Expect=3e-18]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=454, Expect=1e-139]} {RNA1509_29748} {RNA1310_870} {RNA815_993.1} Mlig455_054234 {REF} {Length: 1574} {Pfam: Integrase zinc binding domain [PF17921.3, score=67.3]; Integrase core domain [PF00665.28, score=51.8]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=95.1, Expect=8e-20]} {Smed: dd_Smed_v6_1574_6_72, dd_Smed_v6_1574_6_72, [Score=189, Expect=7e-54]} {RNA1509_29748} {RNA1310_1140.1} {RNA815_993.1} |
11. | MligTC455_31617 | 74 | 1.55 | Mlig455_065879 | Neo: Int S/G2/M Age: - |
USP5 | 0.953 | - | - | - | - | 0.953 | - | Mlig455_065879 {REF} {Length: 3844} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=141.8]; Variant UBP zinc finger [PF17807.3, score=79.8]; UBA/TS-N domain [PF00627.33, score=72.9]; Zn-finger in ubiquitin-hydrolases and other protein [PF02148.21, score=55.1]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=37.6]} {Human: ENSG00000111667, USP5, ubiquitin specific peptidase 5, [RH, Score=750, Expect=0.0]} {Mouse: ENSMUSG00000038429, Usp5, ubiquitin specific peptidase 5 (isopeptidase T), [RH, Score=749, Expect=0.0]} {Dmel: FBgn0035402, Usp5, Ubiquitin specific protease 5, [RH, Score=685, Expect=0.0]} {Celegans: WBGene00020839, usp-5, Ubiquitinyl hydrolase 1, [RH, Score=417, Expect=6e-134]} {Smed: dd_Smed_v6_3655_0_1, dd_Smed_v6_3655_0_1, [RH, Score=323, Expect=2e-103]} {RNA1509_3862, RNA1509_49588} {RNA1310_7195.1, RNA1509_49588} {RNA1509_49588, RNA815_2229} |
12. | MligTC455_35107 | 518 | 10.79 | Mlig455_022097, Mlig455_053635 | Neo: - Age: - Region-enriched R6: 2.982/0.00042 |
0.953 | - | - | - | - | 0.953 | - | Mlig455_022097 {REF} {Length: 2289} {Pfam: Clostridium epsilon toxin ETX/Bacillus mosquitocidal toxin MTX2 [PF03318.15, score=23.5]} {Celegans: WBGene00003010, lin-24, [Score=97.1, Expect=4e-24]} {RNA1509_24923, RNA1509_37147, RNA1509_37737} {RNA1310_12332, RNA1509_37147, RNA1509_37737} {RNA1509_37147, RNA1509_37737, RNA815_6265} Mlig455_053635 {REF} {Length: 1665} {TRANSSPLICED} {Pfam: Clostridium epsilon toxin ETX/Bacillus mosquitocidal toxin MTX2 [PF03318.15, score=23.4]} {Celegans: WBGene00003010, lin-24, [Score=97.1, Expect=4e-24]} {RNA1509_24923} {RNA1310_12332} {RNA815_6265} |
|
13. | MligTC455_36516 | 495 | 10.32 | Mlig455_032048 | Neo: - Age: - Regeneration-downregulated BL: -4.315 Regeneration-depleted BL: -4.315 |
0.953 | - | - | - | - | 0.953 | - | Mlig455_032048 {REF} {Length: 2397} {TRANSSPLICED} {Smed: dd_Smed_v6_8694_0_1, dd_Smed_v6_8694_0_1, [RH, Score=74.7, Expect=7e-17]} {RNA1509_19681, RNA1509_42038} {RNA1310_1563, RNA1509_19681, RNA1509_42038} {RNA1509_19681, RNA1509_42038, RNA815_36419} | |
14. | MligTC455_40917 | 136 | 2.84 | Mlig455_054293, Mlig455_054369 | Neo: - Age: - |
0.953 | - | - | - | - | 0.953 | - | Mlig455_054293 {REF} {Length: 451} {NoTransDecoderORF} {RNA1310_68874} {RNA815_30304} Mlig455_054369 {REF} {Length: 490} {NoTransDecoderORF} {RNA1310_68874} {RNA815_30304} |
|
15. | MligTC455_24548 | 39 | 0.8 | Mlig455_031981 | Neo: - Age: - |
ROBO1 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_031981 {REF} {Length: 4163} {Pfam: Immunoglobulin domain [PF13927.8, score=128.2]; Immunoglobulin I-set domain [PF07679.18, score=115.2]; Immunoglobulin domain [PF00047.27, score=78.6]; Immunoglobulin V-set domain [PF07686.19, score=73.6]; Immunoglobulin domain [PF13895.8, score=71.9]; Fibronectin type III domain [PF00041.23, score=22.4]} {Human: ENSG00000169855, ROBO1, roundabout guidance receptor 1, [Score=164, Expect=3e-40]} {Mouse: ENSMUSG00000032128, Robo3, roundabout guidance receptor 3, [Score=133, Expect=6e-31]} {Dmel: FBgn0005631, robo1, roundabout 1, [Score=139, Expect=4e-33]} {Celegans: WBGene00004729, sax-3, [Score=132, Expect=6e-31]} {Smed: dd_Smed_v6_8494_0_1, dd_Smed_v6_8494_0_1, [Score=239, Expect=1e-64]} {RNA1310_122847} {RNA815_62158} |