Data search


search
Exact
Search

Results for MligTC455_07205

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_07205 15 0.32 Mlig455_068982

Neo: -

Age: -

Mlig455_068982 {REF} {Length: 1540} {Pfam: Glycine rich protein [PF12810.9, score=19.2]} {RNA1310_47448}

Cumulative graph for MligTC455_07205

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 2.245 0.673 1.00000 1.00000
RegionR2 1.288 0.673 0.91592 1.00000
RegionR3 0.739 0.673 0.25466 0.79843
RegionR4 3.166 0.673 0.03703 0.15746
RegionR5 0.778 0.673 0.13734 0.38008
RegionR6 -3.008 0.673 1.00000 1.00000
RegionR7 -2.559 0.673 1.00000 1.00000
RegionR8 -2.649 0.673 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.537 0.673 0.99988 1.00000
RegenerationR2 -1.996 0.673 0.34819 0.78062
RegenerationR3 -2.409 0.673 0.28609 0.71816
RegenerationR4 -2.944 0.673 0.35533 0.78470
RegenerationR5 -2.411 0.673 0.23013 0.66435
RegenerationR6 1.609 0.673 0.99988 1.00000
RegenerationBL 2.507 0.673 1.00000 1.00000
RegenerationTP -0.178 0.673 0.99999 1.00000


Genes with expression patterns similar to MligTC455_07205

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_07205 15 0.32 Mlig455_068982

Neo: -

Age: -

2 1.000 1.000 - - - - Mlig455_068982 {REF} {Length: 1540} {Pfam: Glycine rich protein [PF12810.9, score=19.2]} {RNA1310_47448}
2. MligTC455_32025 18 0.36 Mlig455_028181, Mlig455_028252

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.602

0.955 0.955 - - - - -

Mlig455_028181 {REF} {Length: 4403} {Pfam: PH domain [PF00169.31, score=19.7]} {RNA1310_106355}

Mlig455_028252 {REF} {Length: 3659} {Pfam: PH domain [PF00169.31, score=20.0]} {RNA1310_106355}
3. MligTC455_45862 69 1.44 Mlig455_034443, Mlig455_066209

Neo: -

Age: -

Region-enriched R2: 6.793/0.00003

0.952 0.952 - - - - -

Mlig455_034443 {REF} {Length: 1138} {RNA1310_86023}

Mlig455_066209 {REF} {Length: 1301} {RNA1310_86023}
4. MligTC455_15099 26 0.54 Mlig455_057991, Mlig455_058185

Neo: -

Age: -

Region-enriched R4: 8.074/0.00255

PCDH9 0.951 0.951 - - - - -

Mlig455_057991 {REF} {Length: 5180} {Pfam: Cadherin domain [PF00028.19, score=245.9]; Cadherin-like [PF16184.7, score=32.1]; Cadherin-like [PF08266.14, score=31.0]} {Human: ENSG00000184226, PCDH9, protocadherin 9, [Score=277, Expect=2e-77]} {Mouse: ENSMUSG00000055421, Pcdh9, protocadherin 9, [Score=277, Expect=4e-77]} {Dmel: FBgn0001075, ft, fat, [Score=211, Expect=5e-55]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=171, Expect=7e-43]} {Smed: dd_Smed_v6_16566_0_2, dd_Smed_v6_16566_0_2, [Score=317, Expect=1e-92]} {RNA1509_38512} {RNA1310_81930}

Mlig455_058185 {REF} {Length: 2168} {RNA1310_95463.1}
5. MligTC455_20122 48 1 Mlig455_004561, Mlig455_064755

Neo: -

Age: -

0.951 0.951 - - - - -

Mlig455_004561 {REF} {Length: 665} {RNA1310_57601}

Mlig455_064755 {REF} {Length: 650} {TRANSSPLICED} {RNA1310_57601}
6. MligTC455_37753 410 8.54 Mlig455_054901, Mlig455_065604

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.475

Region-enriched R2: 4.050/0.00069

0.951 0.951 - - - - -

Mlig455_054901 {REF} {Length: 2445} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=23.2]} {Celegans: WBGene00010315, F59B2.13, Putative G-protein coupled receptor F59B2.13, [RH, Score=58.5, Expect=6e-09]} {Smed: dd_Smed_v6_28468_0_1, dd_Smed_v6_28468_0_1, [Score=88.6, Expect=1e-18]} {RNA1509_30384} {RNA1310_34563.1} {RNA815_18979}

Mlig455_065604 {REF} {Length: 2387} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=22.9]} {Celegans: WBGene00010315, F59B2.13, Putative G-protein coupled receptor F59B2.13, [Score=55.1, Expect=9e-08]} {Smed: dd_Smed_v6_28468_0_1, dd_Smed_v6_28468_0_1, [Score=85.5, Expect=2e-17]} {RNA1509_30384} {RNA1310_34563.1} {RNA815_18979}
7. MligTC455_36643 194 4.04 Mlig455_041343

Neo: -

Age: Up-Down-Up

0.95 0.950 - - - - - Mlig455_041343 {REF} {Length: 847} {RNA1509_40031} {RNA1310_41959.1} {RNA815_19701}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA