M. lignano Tomo-Seq
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Results for MligTC455_07209

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_07209 38 0.80 Mlig455_039076, Mlig455_042772

Neo: -

Age: -

Mlig455_039076 {REF} {Length: 318} {TRANSSPLICED} {Pfam: Homeodomain [PF00046.31, score=23.8]}

Mlig455_042772 {REF} {Length: 3691} {Pfam: Homeodomain [PF00046.31, score=23.8]} {RNA1509_5585} {RNA1310_21291.1} {RNA815_15963}

Cumulative graph for MligTC455_07209

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.571 1.195 0.52879 1.00000
RegionR2 0.862 1.195 0.82409 1.00000
RegionR3 2.401 1.195 0.07840 0.49573
RegionR4 -1.038 1.195 0.99891 1.00000
RegionR5 0.551 1.195 0.74486 1.00000
RegionR6 0.284 1.195 0.76417 1.00000
RegionR7 0.111 1.195 0.82145 1.00000
RegionR8 0.399 1.195 0.78192 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 5.156 1.195 0.99974 1.00000
RegenerationR2 5.122 1.195 0.00082 0.04139
RegenerationR3 2.663 1.195 0.04803 0.38139
RegenerationR4 3.254 1.195 0.09284 0.47508
RegenerationR5 2.538 1.195 0.04217 0.33703
RegenerationR6 4.509 1.195 0.00523 0.08720
RegenerationBL 1.234 1.195 0.88946 1.00000
RegenerationTP 4.091 1.195 0.06547 0.41242


Genes with expression patterns similar to MligTC455_07209

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_07209 38 0.8 Mlig455_039076, Mlig455_042772

Neo: -

Age: -

 4 1.000 1.000 - - 1.000 1.000

Mlig455_039076 {REF} {Length: 318} {TRANSSPLICED} {Pfam: Homeodomain [PF00046.31, score=23.8]}

Mlig455_042772 {REF} {Length: 3691} {Pfam: Homeodomain [PF00046.31, score=23.8]} {RNA1509_5585} {RNA1310_21291.1} {RNA815_15963}
2. MligTC455_52516 22 0.45 Mlig455_008588

Neo: -

Age: -

 0.966 - - - - 0.966 - Mlig455_008588 {REF} {Length: 2179} {RNA1310_80172.1} {RNA815_41728}
3. MligTC455_49501 35 0.73 Mlig455_052405

Neo: -

Age: Up-Down-Down

 0.959 - - - - 0.959 - Mlig455_052405 {REF} {Length: 3588} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=33.8]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=19.7]} {RNA1509_45340} {RNA1310_37138} {RNA815_40548}
4. MligTC455_11274 19 0.39 Mlig455_060650

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_060650 {REF} {Length: 656} {NoTransDecoderORF} {RNA1310_80809} {RNA815_48400}
5. MligTC455_26514 34 0.7 Mlig455_017413

Neo: Int S/G2/M

Age: Up-Down-Down

 POLE 0.956 - - - - 0.956 - Mlig455_017413 {REF} {Length: 8333} {Pfam: Domain of unknown function (DUF1744) [PF08490.14, score=310.5]; DNA polymerase family B, exonuclease domain [PF03104.21, score=247.8]; DNA polymerase family B [PF00136.23, score=52.7]; Predicted 3'-5' exonuclease related to the exonuclease domain of PolB [PF10108.11, score=40.3]; RNase_H superfamily [PF13482.8, score=30.4]} {Human: ENSG00000177084, POLE, DNA polymerase epsilon, catalytic subunit, [RH, Score=2359, Expect=0.0]} {Mouse: ENSMUSG00000007080, Pole, polymerase (DNA directed), epsilon, [RH, Score=2361, Expect=0.0]} {Dmel: FBgn0264326, DNApol-epsilon255, DNA polymerase epsilon 255kD subunit, [RH, Score=2177, Expect=0.0]} {Celegans: WBGene00009368, pole-1, DNA polymerase, [RH, Score=1608, Expect=0.0]} {Smed: dd_Smed_v6_13980_0_1, dd_Smed_v6_13980_0_1, [RH, Score=1115, Expect=0.0]} {RNA1509_7028} {RNA1310_299.1} {RNA815_606}
6. MligTC455_33855 36 0.75 Mlig455_032298

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=0.947

 0.951 - - - - 0.951 - Mlig455_032298 {REF} {Length: 3726} {RNA1509_44130} {RNA1310_12316} {RNA815_6064.1}

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