Data search


search
Exact
Search

Results for MligTC455_07230

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_07230 29 0.60 Mlig455_050441

Neo: -

Age: -

Mlig455_050441 {REF} {Length: 977} {RNA1310_42253}

Cumulative graph for MligTC455_07230

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.368 1.151 0.99980 1.00000
RegionR2 -1.468 1.151 0.99976 1.00000
RegionR3 0.683 1.151 0.39922 0.92806
RegionR4 1.629 1.151 0.19865 0.47765
RegionR5 1.849 1.151 0.10126 0.30779
RegionR6 -1.654 1.151 0.99983 1.00000
RegionR7 -0.877 1.151 0.99985 1.00000
RegionR8 -0.529 1.151 0.99983 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.319 1.151 0.99998 1.00000
RegenerationR2 4.522 1.151 0.00327 0.08755
RegenerationR3 1.588 1.151 0.40295 0.80471
RegenerationR4 1.215 1.151 0.55241 0.89331
RegenerationR5 0.942 1.151 0.58928 0.90548
RegenerationR6 3.803 1.151 0.06195 0.31224
RegenerationBL -0.656 1.151 0.99995 1.00000
RegenerationTP 2.447 1.151 0.39341 0.82467


Genes with expression patterns similar to MligTC455_07230

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_07230 29 0.6 Mlig455_050441

Neo: -

Age: -

4 1.000 - - 1.000 1.000 1.000 Mlig455_050441 {REF} {Length: 977} {RNA1310_42253}
2. MligTC455_48791 22 0.45 Mlig455_049838

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.709

1.77 - - - 0.952 - 0.818 Mlig455_049838 {REF} {Length: 1309} {RNA1509_59166} {RNA1310_26794.1} {RNA815_13204}
3. MligTC455_15408 207 4.32 Mlig455_009996, Mlig455_049846, Mlig455_049894

Neo: -

Age: Down-Up-Down

0.976 - - - 0.976 - -

Mlig455_009996 {REF} {Length: 771} {RNA1310_39325} {RNA815_18022}

Mlig455_049846 {REF} {Length: 775} {RNA1310_39325} {RNA815_18022}

Mlig455_049894 {REF} {Length: 775} {RNA1310_39325} {RNA815_18022}
4. MligTC455_17571 66 1.38 Mlig455_055064, Mlig455_064061

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.733

0.968 - - - 0.968 - -

Mlig455_055064 {REF} {Length: 762} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_31425} {RNA1310_38834} {RNA815_18319}

Mlig455_064061 {REF} {Length: 903} {TRANSSPLICED} {RNA1509_31425} {RNA1310_38834} {RNA815_18319}
5. MligTC455_05911 41 0.85 Mlig455_059077

Neo: -

Age: -

0.965 - - - 0.965 - - Mlig455_059077 {REF} {Length: 351} {TRANSSPLICED} {Pfam: Receptor family ligand binding region [PF01094.30, score=66.9]; Iron-containing alcohol dehydrogenase [PF13685.8, score=21.7]} {Smed: dd_Smed_v6_21015_0_2, dd_Smed_v6_21015_0_2, [Score=84.0, Expect=2e-17]} {RNA1310_13608.2} {RNA815_15283}
6. MligTC455_09481 52 1.08 Mlig455_030866

Neo: -

Age: -

TLX3 0.964 - - - - 0.964 - Mlig455_030866 {REF} {Length: 1143} {Pfam: Homeodomain [PF00046.31, score=72.0]} {Human: ENSG00000164438, TLX3, T cell leukemia homeobox 3, [RH, Score=172, Expect=3e-51]; ENSG00000107807, TLX1, T cell leukemia homeobox 1, [RH, Score=166, Expect=7e-49]} {Mouse: ENSMUSG00000040610, Tlx3, T cell leukemia, homeobox 3, [RH, Score=172, Expect=2e-51]; ENSMUSG00000025215, Tlx1, T cell leukemia, homeobox 1, [RH, Score=166, Expect=5e-49]} {Dmel: FBgn0004863, C15, [RH, Score=174, Expect=8e-52]} {Celegans: WBGene00000434, ceh-9, Homeobox protein ceh-9, [Score=84.0, Expect=8e-20]} {Smed: dd_Smed_v6_13781_0_1, dd_Smed_v6_13781_0_1, [RH, Score=183, Expect=3e-57]} {RNA1310_112071}
7. MligTC455_13355 49 1.01 Mlig455_019617

Neo: -

Age: -

0.962 - - - 0.962 - - Mlig455_019617 {REF} {Length: 734} {TRANSSPLICED} {Pfam: Receptor family ligand binding region [PF01094.30, score=66.9]; Iron-containing alcohol dehydrogenase [PF13685.8, score=21.7]} {Smed: dd_Smed_v6_21015_0_2, dd_Smed_v6_21015_0_2, [Score=84.0, Expect=2e-17]} {RNA1310_13608.1} {RNA815_15283}
8. MligTC455_30941 164 3.42 Mlig455_058443

Neo: -

Age: -

SLMAP 0.961 - - - - 0.961 - Mlig455_058443 {REF} {Length: 3910} {TRANSSPLICED} {Pfam: FHA domain [PF00498.28, score=64.8]; Fez1 [PF06818.17, score=22.6]; Inner membrane component of T3SS, cytoplasmic domain [PF16697.7, score=19.3]} {Human: ENSG00000163681, SLMAP, sarcolemma associated protein, [RH, Score=251, Expect=2e-72]} {Mouse: ENSMUSG00000021870, Slmap, sarcolemma associated protein, [RH, Score=250, Expect=5e-72]} {Dmel: FBgn0040011, Slmap, Sarcolemma associated protein, [Score=189, Expect=1e-50]} {Celegans: WBGene00019766, M4.1, [RH, Score=198, Expect=3e-55]} {Smed: dd_Smed_v6_3763_0_5, dd_Smed_v6_3763_0_5, [Score=242, Expect=5e-73]} {RNA1509_20169, RNA1509_43868} {RNA1310_5431.2, RNA1509_20169, RNA1509_43868} {RNA1509_20169, RNA1509_43868, RNA815_8488}
9. MligTC455_11579 34 0.71 Mlig455_045788

Neo: -

Age: -

0.96 - - - 0.960 - - Mlig455_045788 {REF} {Length: 2523} {Pfam: 7 transmembrane receptor (Secretin family) [PF00002.26, score=39.4]} {RNA1509_6409} {RNA1310_984} {RNA815_7594.1}
10. MligTC455_38761 71 1.47 Mlig455_019918, Mlig455_047955

Neo: -

Age: -

0.957 - - - 0.957 - -

Mlig455_019918 {REF} {Length: 1871} {RNA1509_41793} {RNA1310_36132.1} {RNA815_31684}

Mlig455_047955 {REF} {Length: 2537} {RNA1509_40333} {RNA1310_36132.1} {RNA815_31684}
11. MligTC455_39710 32 0.67 Mlig455_034221

Neo: -

Age: -

0.957 - - - 0.957 - - Mlig455_034221 {REF} {Length: 1621} {NoTransDecoderORF} {RNA1509_18723} {RNA1310_2938.3} {RNA815_14343.1}
12. MligTC455_45205 147 3.06 Mlig455_058679

Neo: Int S/G2/M

Age: -

Region-enriched R2: 3.694/0.00736
Region-enriched R4: 2.642/0.00370

0.957 - - - 0.957 - - Mlig455_058679 {REF} {Length: 1141} {RNA1509_48085} {RNA1310_40804} {RNA815_27336}
13. MligTC455_10345 30 0.63 Mlig455_018653, Mlig455_018855

Neo: -

Age: -

0.955 - - - 0.955 - -

Mlig455_018653 {REF} {Length: 1014}

Mlig455_018855 {REF} {Length: 1036}
14. MligTC455_27799 414 8.62 Mlig455_004285, Mlig455_004370

Neo: -

Age: Down-Up-Down

Region-specific R2: 3.850

Region-enriched R2: 5.047/0.00000

0.955 - - - 0.955 - -

Mlig455_004285 {REF} {Length: 650} {RNA1509_56105} {RNA1310_32410} {RNA815_17871.1}

Mlig455_004370 {REF} {Length: 1653} {RNA1509_56105} {RNA1310_32410} {RNA815_17871.1}
15. MligTC455_35373 50 1.03 Mlig455_065912, Mlig455_070019

Neo: -

Age: Down-Up-Down

Regeneration-upregulated BL: 7.651

Regeneration-enriched BL: 7.651

GLRA2 0.955 - - - 0.955 - -

Mlig455_065912 {REF} {Length: 3290} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=157.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=121.2]} {Human: ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=327, Expect=1e-106]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=321, Expect=2e-104]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=319, Expect=1e-103]} {Mouse: ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=325, Expect=4e-106]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=323, Expect=3e-105]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=317, Expect=3e-103]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=313, Expect=2e-101]} {Dmel: FBgn0024963, GluClalpha, [Score=291, Expect=5e-93]} {Celegans: WBGene00001587, ggr-2, GABA/Glycine Receptor family (See gbr), [RH, Score=249, Expect=2e-76]} {Smed: dd_Smed_v6_15331_0_1, dd_Smed_v6_15331_0_1, [Score=283, Expect=3e-90]} {RNA1509_32923} {RNA1310_14629.1} {RNA815_27491}

Mlig455_070019 {REF} {Length: 4890} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=157.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=120.3]} {Human: ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=326, Expect=2e-106]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=323, Expect=4e-105]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=318, Expect=2e-103]} {Mouse: ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=325, Expect=5e-106]; ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=324, Expect=7e-106]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=317, Expect=6e-103]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=313, Expect=1e-101]} {Dmel: FBgn0024963, GluClalpha, [Score=288, Expect=7e-92]} {Celegans: WBGene00001587, ggr-2, GABA/Glycine Receptor family (See gbr), [RH, Score=249, Expect=2e-76]} {Smed: dd_Smed_v6_15331_0_1, dd_Smed_v6_15331_0_1, [Score=284, Expect=2e-90]} {RNA1509_32923} {RNA1310_14629.1} {RNA815_27491}
16. MligTC455_52491 413 8.61 Mlig455_041906

Neo: -

Age: logFC(26M/2M)=-0.855

Region-specific R2: 3.229

Region-enriched R2: 2.944/0.00036

0.952 - - - 0.952 - - Mlig455_041906 {REF} {Length: 712} {RNA1509_31700} {RNA1310_225.1, RNA1509_31700} {RNA1509_31700, RNA815_107.1}
17. MligTC455_18890 42 0.87 Mlig455_013800

Neo: -

Age: Up-Down-Down

0.951 - - - 0.951 - - Mlig455_013800 {REF} {Length: 1234} {RNA1509_44733} {RNA1310_35976} {RNA815_45308}
18. MligTC455_19307 39 0.81 Mlig455_052734

Neo: -

Age: -

0.95 - - - - - 0.950 Mlig455_052734 {REF} {Length: 1363} {NoTransDecoderORF} {RNA1509_18723} {RNA1310_57981} {RNA815_32888}
19. MligTC455_32077 240 4.99 Mlig455_032957

Neo: -

Age: -

0.95 - - - - 0.950 - Mlig455_032957 {REF} {Length: 4172} {TRANSSPLICED} {RNA1509_19305, RNA1509_34564} {RNA1310_20429.1, RNA1509_19305, RNA1509_34564} {RNA1509_19305, RNA1509_34564, RNA815_7869}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA