Data search
Results for MligTC455_07279
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_07279 | 1262 | 26.29 | Mlig455_011765, Mlig455_047977 | Neo: - Age: - |
Mlig455_011765 {REF} {Length: 1697} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=19.5]; CCCH-type zinc finger [PF18044.3, score=19.1]} {RNA1509_3489} {RNA1310_2848.1} {RNA815_4953.1} Mlig455_047977 {REF} {Length: 2237} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_3489} {RNA1310_2848.1} {RNA815_4953.1} |
Cumulative graph for MligTC455_07279
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.498 | 5.018 | 0.59974 | 1.00000 | |
| RegionR2 | 0.272 | 5.018 | 0.51940 | 0.89417 | |
| RegionR3 | 0.02 | 5.018 | 0.95332 | 1.00000 | |
| RegionR4 | -0.048 | 5.018 | 0.90810 | 1.00000 | |
| RegionR5 | 0.088 | 5.018 | 0.77039 | 1.00000 | |
| RegionR6 | -0.174 | 5.018 | 0.60918 | 1.00000 | |
| RegionR7 | 0.149 | 5.018 | 0.72769 | 1.00000 | |
| RegionR8 | 0.192 | 5.018 | 0.73556 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.67 | 5.018 | 0.58074 | 1.00000 | |
| RegenerationR2 | -0.792 | 5.018 | 0.04001 | 0.33070 | |
| RegenerationR3 | 0.08 | 5.018 | 0.84417 | 0.99602 | |
| RegenerationR4 | -0.552 | 5.018 | 0.17665 | 0.61611 | |
| RegenerationR5 | -0.082 | 5.018 | 0.82669 | 0.99655 | |
| RegenerationR6 | 0.343 | 5.018 | 0.39221 | 0.73134 | |
| RegenerationBL | 0.545 | 5.018 | 0.23237 | 0.58414 | |
| RegenerationTP | 0.238 | 5.018 | 0.62638 | 0.97532 |
Genes with expression patterns similar to MligTC455_07279
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_07279 | 1262 | 26.29 | Mlig455_011765, Mlig455_047977 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_011765 {REF} {Length: 1697} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=19.5]; CCCH-type zinc finger [PF18044.3, score=19.1]} {RNA1509_3489} {RNA1310_2848.1} {RNA815_4953.1} Mlig455_047977 {REF} {Length: 2237} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_3489} {RNA1310_2848.1} {RNA815_4953.1} |
|
| 2. | MligTC455_28890 | 160 | 3.33 | Mlig455_007457 | Neo: - Age: - |
CNFN | 0.99 | - | - | - | 0.990 | - | - | Mlig455_007457 {REF} {Length: 10025} {TRANSSPLICED} {Pfam: PLAC8 family [PF04749.19, score=49.2]} {Human: ENSG00000105427, CNFN, cornifelin, [Score=45.1, Expect=4e-06]} {Mouse: ENSMUSG00000063651, Cnfn, cornifelin, [Score=46.6, Expect=9e-07]} {Smed: dd_Smed_v6_865_0_1, dd_Smed_v6_865_0_1, [Score=94.4, Expect=4e-25]} {RNA1509_12352, RNA1509_27795, RNA1509_53322} {RNA1310_2280.1, RNA1509_27795, RNA1509_53322} {RNA1509_27795, RNA1509_53322, RNA815_459.1} |
| 3. | MligTC455_23553 | 165 | 3.44 | Mlig455_020966 | Neo: - Age: - |
CSNK1G1 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_020966 {REF} {Length: 3985} {Pfam: Protein kinase domain [PF00069.27, score=100.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=54.6]; Fungal protein kinase [PF17667.3, score=29.0]} {Human: ENSG00000169118, CSNK1G1, casein kinase 1 gamma 1, [RH, Score=529, Expect=0.0]; ENSG00000151292, CSNK1G3, casein kinase 1 gamma 3, [RH, Score=521, Expect=0.0]; ENSG00000133275, CSNK1G2, casein kinase 1 gamma 2, [RH, Score=514, Expect=5e-180]} {Mouse: ENSMUSG00000032384, Csnk1g1, casein kinase 1, gamma 1, [RH, Score=538, Expect=0.0]; ENSMUSG00000073563, Csnk1g3, casein kinase 1, gamma 3, [RH, Score=513, Expect=1e-179]} {Dmel: FBgn0250823, gish, gilgamesh, [RH, Score=514, Expect=9e-180]} {Celegans: WBGene00013709, csnk-1, Casein kinase I gamma, [RH, Score=513, Expect=2e-180]} {Smed: dd_Smed_v6_8508_0_2, dd_Smed_v6_8508_0_2, [RH, Score=464, Expect=3e-161]} {RNA1509_20026} {RNA1310_20582.1} {RNA815_13120.1} |
| 4. | MligTC455_28889 | 148 | 3.07 | Mlig455_007222 | Neo: - Age: Down-Down-Up |
CNFN | 0.95 | - | - | - | 0.950 | - | - | Mlig455_007222 {REF} {Length: 9971} {TRANSSPLICED} {Pfam: PLAC8 family [PF04749.19, score=49.2]} {Human: ENSG00000105427, CNFN, cornifelin, [Score=45.1, Expect=4e-06]} {Mouse: ENSMUSG00000063651, Cnfn, cornifelin, [Score=46.6, Expect=9e-07]} {Smed: dd_Smed_v6_865_0_1, dd_Smed_v6_865_0_1, [Score=94.4, Expect=4e-25]} {RNA1509_12352, RNA1509_36973} {RNA1310_2280.1, RNA1509_36973} {RNA1509_36973, RNA815_459.1} |
Berezikov Lab - 2020-2021 © ERIBA