M. lignano Tomo-Seq
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Results for MligTC455_07280

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_07280 25 0.51 Mlig455_004606

Neo: -

Age: -

Region-enriched R5: 3.727/0.02157

 Mlig455_004606 {REF} {Length: 830} {RNA1310_67184} {RNA815_46215}

Cumulative graph for MligTC455_07280

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -5.352 0.605 0.99978 1.00000
RegionR2 -0.942 0.605 0.99992 1.00000
RegionR3 1.404 0.605 0.99983 1.00000
RegionR4 3.874 0.605 0.99975 1.00000
RegionR5 3.727 0.605 0.00265 0.02157
RegionR6 -0.513 0.605 1.00000 1.00000
RegionR7 -1.47 0.605 1.00000 1.00000
RegionR8 -0.728 0.605 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 2.378 0.605 0.99994 1.00000
RegenerationR2 -2.737 0.605 0.01249 0.18219
RegenerationR3 -3.877 0.605 0.99967 1.00000
RegenerationR4 -2.116 0.605 0.99994 1.00000
RegenerationR5 -3.835 0.605 0.03344 0.30434
RegenerationR6 0.941 0.605 1.00000 1.00000
RegenerationBL 1.015 0.605 0.99994 1.00000
RegenerationTP -2.106 0.605 0.99994 1.00000


Genes with expression patterns similar to MligTC455_07280

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_07280 25 0.51 Mlig455_004606

Neo: -

Age: -

Region-enriched R5: 3.727/0.02157

 2 - - 1.000 1.000 - - Mlig455_004606 {REF} {Length: 830} {RNA1310_67184} {RNA815_46215}
2. MligTC455_07281 23 0.47 Mlig455_064782

Neo: -

Age: -

Region-enriched R5: 3.727/0.02157

 2 - - 1.000 1.000 - - Mlig455_064782 {REF} {Length: 827} {TRANSSPLICED} {RNA1310_67184} {RNA815_46215}
3. MligTC455_49217 15 0.31 Mlig455_019173

Neo: -

Age: -

 0.954 - - - 0.954 - - Mlig455_019173 {REF} {Length: 1104} {NoTransDecoderORF} {RNA1310_144817}
4. MligTC455_12739 35 0.73 Mlig455_025061, Mlig455_025077, Mlig455_066028, Mlig455_067619

Neo: -

Age: -

 RAB10 0.953 - - - 0.953 - -

Mlig455_025061 {REF} {Length: 877} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=215.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=121.6]; ADP-ribosylation factor family [PF00025.23, score=60.8]; Gtr1/RagA G protein conserved region [PF04670.14, score=26.4]; RsgA GTPase [PF03193.18, score=24.8]; Elongation factor Tu GTP binding domain [PF00009.29, score=22.1]; 50S ribosome-binding GTPase [PF01926.25, score=20.0]; Signal recognition particle receptor beta subunit [PF09439.12, score=18.9]; Ferrous iron transport protein B [PF02421.20, score=18.1]} {Human: ENSG00000084733, RAB10, RAB10, member RAS oncogene family, [RH, Score=276, Expect=4e-94]} {Mouse: ENSMUSG00000020671, Rab10, RAB10, member RAS oncogene family, [RH, Score=276, Expect=3e-94]} {Dmel: FBgn0015789, Rab10, [RH, Score=268, Expect=3e-91]} {Celegans: WBGene00004273, rab-10, Ras-related protein Rab-10, [RH, Score=261, Expect=6e-89]} {Smed: dd_Smed_v6_1573_0_1, dd_Smed_v6_1573_0_1, [Score=237, Expect=2e-79]} {RNA1509_7600} {RNA1310_31770} {RNA815_8855}

Mlig455_025077 {REF} {Length: 877} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=215.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=121.6]; ADP-ribosylation factor family [PF00025.23, score=60.8]; Gtr1/RagA G protein conserved region [PF04670.14, score=26.4]; RsgA GTPase [PF03193.18, score=24.8]; Elongation factor Tu GTP binding domain [PF00009.29, score=22.1]; 50S ribosome-binding GTPase [PF01926.25, score=20.0]; Signal recognition particle receptor beta subunit [PF09439.12, score=18.9]; Ferrous iron transport protein B [PF02421.20, score=18.1]} {Human: ENSG00000084733, RAB10, RAB10, member RAS oncogene family, [RH, Score=276, Expect=4e-94]} {Mouse: ENSMUSG00000020671, Rab10, RAB10, member RAS oncogene family, [RH, Score=276, Expect=3e-94]} {Dmel: FBgn0015789, Rab10, [RH, Score=268, Expect=3e-91]} {Celegans: WBGene00004273, rab-10, Ras-related protein Rab-10, [RH, Score=261, Expect=6e-89]} {Smed: dd_Smed_v6_1573_0_1, dd_Smed_v6_1573_0_1, [Score=237, Expect=2e-79]} {RNA1509_7600} {RNA1310_31770} {RNA815_8855}

Mlig455_066028 {REF} {Length: 745} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=215.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=121.6]; ADP-ribosylation factor family [PF00025.23, score=60.8]; Gtr1/RagA G protein conserved region [PF04670.14, score=26.5]; RsgA GTPase [PF03193.18, score=24.9]; Elongation factor Tu GTP binding domain [PF00009.29, score=22.1]; 50S ribosome-binding GTPase [PF01926.25, score=20.0]; Signal recognition particle receptor beta subunit [PF09439.12, score=18.9]; Ferrous iron transport protein B [PF02421.20, score=18.2]} {Human: ENSG00000084733, RAB10, RAB10, member RAS oncogene family, [RH, Score=277, Expect=1e-94]} {Mouse: ENSMUSG00000020671, Rab10, RAB10, member RAS oncogene family, [RH, Score=277, Expect=9e-95]} {Dmel: FBgn0015789, Rab10, [RH, Score=269, Expect=1e-91]} {Celegans: WBGene00004273, rab-10, Ras-related protein Rab-10, [RH, Score=263, Expect=2e-89]} {Smed: dd_Smed_v6_1573_0_1, dd_Smed_v6_1573_0_1, [Score=237, Expect=2e-79]} {RNA1509_20610} {RNA1310_31770} {RNA815_8855}

Mlig455_067619 {REF} {Length: 876} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=215.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=121.6]; ADP-ribosylation factor family [PF00025.23, score=60.8]; Gtr1/RagA G protein conserved region [PF04670.14, score=26.4]; RsgA GTPase [PF03193.18, score=24.8]; Elongation factor Tu GTP binding domain [PF00009.29, score=22.1]; 50S ribosome-binding GTPase [PF01926.25, score=20.0]; Signal recognition particle receptor beta subunit [PF09439.12, score=18.9]; Ferrous iron transport protein B [PF02421.20, score=18.1]} {Human: ENSG00000084733, RAB10, RAB10, member RAS oncogene family, [RH, Score=276, Expect=4e-94]} {Mouse: ENSMUSG00000020671, Rab10, RAB10, member RAS oncogene family, [RH, Score=276, Expect=3e-94]} {Dmel: FBgn0015789, Rab10, [RH, Score=268, Expect=3e-91]} {Celegans: WBGene00004273, rab-10, Ras-related protein Rab-10, [RH, Score=261, Expect=6e-89]} {Smed: dd_Smed_v6_1573_0_1, dd_Smed_v6_1573_0_1, [Score=237, Expect=2e-79]} {RNA1509_20610} {RNA1310_31770} {RNA815_8855}
5. MligTC455_27744 161 3.36 Mlig455_004404, Mlig455_017819

Neo: -

Age: -

Region-enriched R4: 3.738/0.01622
Region-enriched R5: 2.488/0.04158

 0.953 - - - 0.953 - -

Mlig455_004404 {REF} {Length: 2943} {RNA1509_46309} {RNA1310_20557.2} {RNA815_47708}

Mlig455_017819 {REF} {Length: 611} {NoTransDecoderORF} {RNA1509_46309} {RNA1310_20557.2}

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