TomoSeq data search

Data search

Results for MligTC455_07380

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_07380	6831	142.32	Mlig455_062108, Mlig455_062110	Neo: - Age: -	SDHA	Mlig455_062108 {REF} {Length: 908} {Pfam: FAD binding domain [PF00890.26, score=43.8]} {Human: ENSG00000073578, SDHA, succinate dehydrogenase complex flavoprotein subunit A, [Score=107, Expect=3e-27]} {Mouse: ENSMUSG00000021577, Sdha, succinate dehydrogenase complex, subunit A, flavoprotein (Fp), [Score=105, Expect=7e-27]} {Dmel: FBgn0261439, SdhA, Succinate dehydrogenase, subunit A (flavoprotein), [Score=111, Expect=4e-29]} {Celegans: WBGene00016392, sdha-2, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, [Score=99.8, Expect=3e-25]} {Smed: dd_Smed_v6_897_0_1, dd_Smed_v6_897_0_1, [Score=117, Expect=2e-31]} {RNA1509_3172} {RNA1310_8065.1} {RNA815_2583.1} Mlig455_062110 {REF} {Length: 2608} {Pfam: FAD binding domain [PF00890.26, score=415.0]; Fumarate reductase flavoprotein C-term [PF02910.22, score=141.8]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=22.9]; Thi4 family [PF01946.19, score=22.1]; Glucose inhibited division protein A [PF01134.24, score=20.5]} {Human: ENSG00000073578, SDHA, succinate dehydrogenase complex flavoprotein subunit A, [RH, Score=958, Expect=0.0]} {Mouse: ENSMUSG00000021577, Sdha, succinate dehydrogenase complex, subunit A, flavoprotein (Fp), [RH, Score=954, Expect=0.0]} {Dmel: FBgn0261439, SdhA, Succinate dehydrogenase, subunit A (flavoprotein), [RH, Score=979, Expect=0.0]} {Celegans: WBGene00015391, sdha-1, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, [RH, Score=919, Expect=0.0]} {Smed: dd_Smed_v6_897_0_1, dd_Smed_v6_897_0_1, [RH, Score=1011, Expect=0.0]} {RNA1509_21008, RNA1509_3172, RNA1509_809} {RNA1310_8065.1, RNA1509_21008, RNA1509_3172, RNA1509_809} {RNA1509_21008, RNA1509_3172, RNA1509_809, RNA815_2583.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_07380

6831

142.32

Mlig455_062108, Mlig455_062110

Neo: -

Age: -

SDHA

Mlig455_062108 {REF} {Length: 908} {Pfam: FAD binding domain [PF00890.26, score=43.8]} {Human: ENSG00000073578, SDHA, succinate dehydrogenase complex flavoprotein subunit A, [Score=107, Expect=3e-27]} {Mouse: ENSMUSG00000021577, Sdha, succinate dehydrogenase complex, subunit A, flavoprotein (Fp), [Score=105, Expect=7e-27]} {Dmel: FBgn0261439, SdhA, Succinate dehydrogenase, subunit A (flavoprotein), [Score=111, Expect=4e-29]} {Celegans: WBGene00016392, sdha-2, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, [Score=99.8, Expect=3e-25]} {Smed: dd_Smed_v6_897_0_1, dd_Smed_v6_897_0_1, [Score=117, Expect=2e-31]} {RNA1509_3172} {RNA1310_8065.1} {RNA815_2583.1}

Mlig455_062110 {REF} {Length: 2608} {Pfam: FAD binding domain [PF00890.26, score=415.0]; Fumarate reductase flavoprotein C-term [PF02910.22, score=141.8]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=22.9]; Thi4 family [PF01946.19, score=22.1]; Glucose inhibited division protein A [PF01134.24, score=20.5]} {Human: ENSG00000073578, SDHA, succinate dehydrogenase complex flavoprotein subunit A, [RH, Score=958, Expect=0.0]} {Mouse: ENSMUSG00000021577, Sdha, succinate dehydrogenase complex, subunit A, flavoprotein (Fp), [RH, Score=954, Expect=0.0]} {Dmel: FBgn0261439, SdhA, Succinate dehydrogenase, subunit A (flavoprotein), [RH, Score=979, Expect=0.0]} {Celegans: WBGene00015391, sdha-1, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, [RH, Score=919, Expect=0.0]} {Smed: dd_Smed_v6_897_0_1, dd_Smed_v6_897_0_1, [RH, Score=1011, Expect=0.0]} {RNA1509_21008, RNA1509_3172, RNA1509_809} {RNA1310_8065.1, RNA1509_21008, RNA1509_3172, RNA1509_809} {RNA1509_21008, RNA1509_3172, RNA1509_809, RNA815_2583.1}

Cumulative graph for MligTC455_07380

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.538	7.25	0.17738	0.80461
RegionR2	0.397	7.25	0.05973	0.29450
RegionR3	0.36	7.25	0.03693	0.33407
RegionR4	0.541	7.25	0.00671	0.04558
RegionR5	0.188	7.25	0.25501	0.57295
RegionR6	-0.21	7.25	0.25223	0.83825
RegionR7	-0.278	7.25	0.19610	0.80261
RegionR8	-0.46	7.25	0.07960	0.53693

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.453	7.25	0.42965	1.00000
RegenerationR2	0.233	7.25	0.24342	0.69140
RegenerationR3	0.103	7.25	0.62526	0.91798
RegenerationR4	-0.018	7.25	0.93477	1.00000
RegenerationR5	0.174	7.25	0.39733	0.79747
RegenerationR6	0.534	7.25	0.01297	0.14052
RegenerationBL	0.453	7.25	0.03614	0.21440
RegenerationTP	0.06	7.25	0.80853	1.00000

Genes with expression patterns similar to MligTC455_07380

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_07380	6831	142.32	Mlig455_062108, Mlig455_062110	Neo: - Age: -	SDHA	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_062108 {REF} {Length: 908} {Pfam: FAD binding domain [PF00890.26, score=43.8]} {Human: ENSG00000073578, SDHA, succinate dehydrogenase complex flavoprotein subunit A, [Score=107, Expect=3e-27]} {Mouse: ENSMUSG00000021577, Sdha, succinate dehydrogenase complex, subunit A, flavoprotein (Fp), [Score=105, Expect=7e-27]} {Dmel: FBgn0261439, SdhA, Succinate dehydrogenase, subunit A (flavoprotein), [Score=111, Expect=4e-29]} {Celegans: WBGene00016392, sdha-2, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, [Score=99.8, Expect=3e-25]} {Smed: dd_Smed_v6_897_0_1, dd_Smed_v6_897_0_1, [Score=117, Expect=2e-31]} {RNA1509_3172} {RNA1310_8065.1} {RNA815_2583.1} Mlig455_062110 {REF} {Length: 2608} {Pfam: FAD binding domain [PF00890.26, score=415.0]; Fumarate reductase flavoprotein C-term [PF02910.22, score=141.8]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=22.9]; Thi4 family [PF01946.19, score=22.1]; Glucose inhibited division protein A [PF01134.24, score=20.5]} {Human: ENSG00000073578, SDHA, succinate dehydrogenase complex flavoprotein subunit A, [RH, Score=958, Expect=0.0]} {Mouse: ENSMUSG00000021577, Sdha, succinate dehydrogenase complex, subunit A, flavoprotein (Fp), [RH, Score=954, Expect=0.0]} {Dmel: FBgn0261439, SdhA, Succinate dehydrogenase, subunit A (flavoprotein), [RH, Score=979, Expect=0.0]} {Celegans: WBGene00015391, sdha-1, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, [RH, Score=919, Expect=0.0]} {Smed: dd_Smed_v6_897_0_1, dd_Smed_v6_897_0_1, [RH, Score=1011, Expect=0.0]} {RNA1509_21008, RNA1509_3172, RNA1509_809} {RNA1310_8065.1, RNA1509_21008, RNA1509_3172, RNA1509_809} {RNA1509_21008, RNA1509_3172, RNA1509_809, RNA815_2583.1}
2.	MligTC455_05864	488	10.17	Mlig455_070030	Neo: - Age: - Region-enriched R4: 1.140/0.03009	ANK1	0.955	-	-	-	-	0.955	-	Mlig455_070030 {REF} {Length: 3217} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=141.3]; Ankyrin repeats (many copies) [PF13857.8, score=119.7]; Ankyrin repeat [PF13606.8, score=115.5]; Ankyrin repeat [PF00023.32, score=103.9]; Ankyrin repeats (many copies) [PF13637.8, score=95.1]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=131, Expect=7e-32]} {Mouse: ENSMUSG00000033781, Asb13, ankyrin repeat and SOCS box-containing 13, [RH, Score=122, Expect=3e-31]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=115, Expect=2e-27]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=118, Expect=7e-28]} {Smed: dd_Smed_v6_2072_0_29, dd_Smed_v6_2072_0_29, [Score=114, Expect=9e-27]} {RNA1509_42578} {RNA1310_31573.2} {RNA815_22984}
3.	MligTC455_35976	804	16.76	Mlig455_003465, Mlig455_058143	Neo: - Age: -	ARHGAP21	0.952	-	-	-	-	0.952	-	Mlig455_003465 {REF} {Length: 7068} {TRANSSPLICED} {Pfam: RhoGAP domain [PF00620.29, score=117.4]; PDZ domain [PF17820.3, score=38.1]; PDZ domain [PF00595.26, score=36.3]; PDZ domain [PF13180.8, score=31.6]} {Human: ENSG00000107863, ARHGAP21, Rho GTPase activating protein 21, [RH, Score=148, Expect=3e-35]; ENSG00000275832, ARHGAP23, Rho GTPase activating protein 23, [RH, Score=148, Expect=3e-35]; ENSG00000273780, ARHGAP23, Rho GTPase activating protein 23, [RH, Score=148, Expect=3e-35]} {Mouse: ENSMUSG00000036591, Arhgap21, Rho GTPase activating protein 21, [RH, Score=148, Expect=2e-35]; ENSMUSG00000049807, Arhgap23, Rho GTPase activating protein 23, [RH, Score=148, Expect=1e-35]} {Dmel: FBgn0031118, RhoGAP19D, Rho GTPase activating protein at 19D, [Score=105, Expect=2e-22]} {Celegans: WBGene00015418, pac-1, GTPase-activating protein pac-1, [RH, Score=139, Expect=7e-33]} {Smed: dd_Smed_v6_7732_0_1, dd_Smed_v6_7732_0_1, [RH, Score=157, Expect=5e-39]} {RNA1509_30713, RNA1509_38599, RNA1509_38665} {RNA1310_2653.2, RNA1509_30713, RNA1509_38599, RNA1509_38665} {RNA1509_30713, RNA1509_38599, RNA1509_38665, RNA815_3980.1} Mlig455_058143 {REF} {Length: 7182} {TRANSSPLICED} {Pfam: RhoGAP domain [PF00620.29, score=118.1]; PDZ domain [PF17820.3, score=38.3]; PDZ domain [PF00595.26, score=36.2]; PDZ domain [PF13180.8, score=31.6]} {Human: ENSG00000107863, ARHGAP21, Rho GTPase activating protein 21, [RH, Score=148, Expect=3e-35]; ENSG00000275832, ARHGAP23, Rho GTPase activating protein 23, [RH, Score=148, Expect=3e-35]; ENSG00000273780, ARHGAP23, Rho GTPase activating protein 23, [RH, Score=148, Expect=3e-35]} {Mouse: ENSMUSG00000036591, Arhgap21, Rho GTPase activating protein 21, [RH, Score=148, Expect=2e-35]; ENSMUSG00000049807, Arhgap23, Rho GTPase activating protein 23, [RH, Score=148, Expect=1e-35]} {Dmel: FBgn0031118, RhoGAP19D, Rho GTPase activating protein at 19D, [Score=104, Expect=3e-22]} {Celegans: WBGene00015418, pac-1, GTPase-activating protein pac-1, [RH, Score=139, Expect=6e-33]} {Smed: dd_Smed_v6_7732_0_1, dd_Smed_v6_7732_0_1, [RH, Score=157, Expect=5e-39]} {RNA1509_38599} {RNA1310_2653.2} {RNA815_3980.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_07380

6831

142.32

Mlig455_062108, Mlig455_062110

Neo: -

Age: -

SDHA

1.000

MligTC455_05864

488

10.17

Mlig455_070030

Neo: -

Age: -

Region-enriched R4: 1.140/0.03009

ANK1

0.955

Mlig455_070030 {REF} {Length: 3217} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=141.3]; Ankyrin repeats (many copies) [PF13857.8, score=119.7]; Ankyrin repeat [PF13606.8, score=115.5]; Ankyrin repeat [PF00023.32, score=103.9]; Ankyrin repeats (many copies) [PF13637.8, score=95.1]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=131, Expect=7e-32]} {Mouse: ENSMUSG00000033781, Asb13, ankyrin repeat and SOCS box-containing 13, [RH, Score=122, Expect=3e-31]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=115, Expect=2e-27]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=118, Expect=7e-28]} {Smed: dd_Smed_v6_2072_0_29, dd_Smed_v6_2072_0_29, [Score=114, Expect=9e-27]} {RNA1509_42578} {RNA1310_31573.2} {RNA815_22984}

MligTC455_35976

804

16.76

Mlig455_003465, Mlig455_058143

Neo: -

Age: -

ARHGAP21

0.952

Mlig455_003465 {REF} {Length: 7068} {TRANSSPLICED} {Pfam: RhoGAP domain [PF00620.29, score=117.4]; PDZ domain [PF17820.3, score=38.1]; PDZ domain [PF00595.26, score=36.3]; PDZ domain [PF13180.8, score=31.6]} {Human: ENSG00000107863, ARHGAP21, Rho GTPase activating protein 21, [RH, Score=148, Expect=3e-35]; ENSG00000275832, ARHGAP23, Rho GTPase activating protein 23, [RH, Score=148, Expect=3e-35]; ENSG00000273780, ARHGAP23, Rho GTPase activating protein 23, [RH, Score=148, Expect=3e-35]} {Mouse: ENSMUSG00000036591, Arhgap21, Rho GTPase activating protein 21, [RH, Score=148, Expect=2e-35]; ENSMUSG00000049807, Arhgap23, Rho GTPase activating protein 23, [RH, Score=148, Expect=1e-35]} {Dmel: FBgn0031118, RhoGAP19D, Rho GTPase activating protein at 19D, [Score=105, Expect=2e-22]} {Celegans: WBGene00015418, pac-1, GTPase-activating protein pac-1, [RH, Score=139, Expect=7e-33]} {Smed: dd_Smed_v6_7732_0_1, dd_Smed_v6_7732_0_1, [RH, Score=157, Expect=5e-39]} {RNA1509_30713, RNA1509_38599, RNA1509_38665} {RNA1310_2653.2, RNA1509_30713, RNA1509_38599, RNA1509_38665} {RNA1509_30713, RNA1509_38599, RNA1509_38665, RNA815_3980.1}

Mlig455_058143 {REF} {Length: 7182} {TRANSSPLICED} {Pfam: RhoGAP domain [PF00620.29, score=118.1]; PDZ domain [PF17820.3, score=38.3]; PDZ domain [PF00595.26, score=36.2]; PDZ domain [PF13180.8, score=31.6]} {Human: ENSG00000107863, ARHGAP21, Rho GTPase activating protein 21, [RH, Score=148, Expect=3e-35]; ENSG00000275832, ARHGAP23, Rho GTPase activating protein 23, [RH, Score=148, Expect=3e-35]; ENSG00000273780, ARHGAP23, Rho GTPase activating protein 23, [RH, Score=148, Expect=3e-35]} {Mouse: ENSMUSG00000036591, Arhgap21, Rho GTPase activating protein 21, [RH, Score=148, Expect=2e-35]; ENSMUSG00000049807, Arhgap23, Rho GTPase activating protein 23, [RH, Score=148, Expect=1e-35]} {Dmel: FBgn0031118, RhoGAP19D, Rho GTPase activating protein at 19D, [Score=104, Expect=3e-22]} {Celegans: WBGene00015418, pac-1, GTPase-activating protein pac-1, [RH, Score=139, Expect=6e-33]} {Smed: dd_Smed_v6_7732_0_1, dd_Smed_v6_7732_0_1, [RH, Score=157, Expect=5e-39]} {RNA1509_38599} {RNA1310_2653.2} {RNA815_3980.1}