TomoSeq data search

Data search

Results for MligTC455_07477

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_07477	10	0.21	Mlig455_016831, Mlig455_065927	Neo: - Age: -	UNCX	Mlig455_016831 {REF} {Length: 1433} {Pfam: Homeodomain [PF00046.31, score=78.6]} {Human: ENSG00000164853, UNCX, UNC homeobox, [RH, Score=176, Expect=5e-50]} {Mouse: ENSMUSG00000029546, Uncx, UNC homeobox, [RH, Score=178, Expect=1e-50]} {Dmel: FBgn0024184, unc-4, [RH, Score=168, Expect=9e-47]} {Celegans: WBGene00006744, unc-4, Homeobox protein unc-4, [RH, Score=120, Expect=1e-31]} {Smed: dd_Smed_v6_22163_0_1, dd_Smed_v6_22163_0_1, [RH, Score=166, Expect=5e-48]} {RNA1310_68888} Mlig455_065927 {REF} {Length: 1620} {Pfam: Homeodomain [PF00046.31, score=78.6]} {Human: ENSG00000164853, UNCX, UNC homeobox, [RH, Score=176, Expect=5e-50]} {Mouse: ENSMUSG00000029546, Uncx, UNC homeobox, [RH, Score=178, Expect=1e-50]} {Dmel: FBgn0024184, unc-4, [RH, Score=168, Expect=9e-47]} {Celegans: WBGene00006744, unc-4, Homeobox protein unc-4, [RH, Score=120, Expect=1e-31]} {Smed: dd_Smed_v6_22163_0_1, dd_Smed_v6_22163_0_1, [RH, Score=166, Expect=5e-48]} {RNA1310_68888}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_07477

0.21

Mlig455_016831, Mlig455_065927

Neo: -

Age: -

UNCX

Mlig455_016831 {REF} {Length: 1433} {Pfam: Homeodomain [PF00046.31, score=78.6]} {Human: ENSG00000164853, UNCX, UNC homeobox, [RH, Score=176, Expect=5e-50]} {Mouse: ENSMUSG00000029546, Uncx, UNC homeobox, [RH, Score=178, Expect=1e-50]} {Dmel: FBgn0024184, unc-4, [RH, Score=168, Expect=9e-47]} {Celegans: WBGene00006744, unc-4, Homeobox protein unc-4, [RH, Score=120, Expect=1e-31]} {Smed: dd_Smed_v6_22163_0_1, dd_Smed_v6_22163_0_1, [RH, Score=166, Expect=5e-48]} {RNA1310_68888}

Mlig455_065927 {REF} {Length: 1620} {Pfam: Homeodomain [PF00046.31, score=78.6]} {Human: ENSG00000164853, UNCX, UNC homeobox, [RH, Score=176, Expect=5e-50]} {Mouse: ENSMUSG00000029546, Uncx, UNC homeobox, [RH, Score=178, Expect=1e-50]} {Dmel: FBgn0024184, unc-4, [RH, Score=168, Expect=9e-47]} {Celegans: WBGene00006744, unc-4, Homeobox protein unc-4, [RH, Score=120, Expect=1e-31]} {Smed: dd_Smed_v6_22163_0_1, dd_Smed_v6_22163_0_1, [RH, Score=166, Expect=5e-48]} {RNA1310_68888}

Cumulative graph for MligTC455_07477

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-3.091	0.661	0.99972	1.00000
RegionR2	5.88	0.661	0.00410	0.05666
RegionR3	-1.446	0.661	0.99980	1.00000
RegionR4	0.496	0.661	0.99601	1.00000
RegionR5	-2.715	0.661	0.99974	1.00000
RegionR6	1.211	0.661	0.72196	1.00000
RegionR7	-0.283	0.661	1.00000	1.00000
RegionR8	-0.051	0.661	0.99998	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	4.981	0.661	0.99994	1.00000
RegenerationR2	-1.767	0.661	0.95154	1.00000
RegenerationR3	3.183	0.661	0.99992	1.00000
RegenerationR4	-0.626	0.661	0.97007	1.00000
RegenerationR5	2.655	0.661	0.99992	1.00000
RegenerationR6	0.923	0.661	0.97640	1.00000
RegenerationBL	1.801	0.661	0.99987	1.00000
RegenerationTP	1.832	0.661	0.99994	1.00000

Genes with expression patterns similar to MligTC455_07477

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_07477	10	0.21	Mlig455_016831, Mlig455_065927	Neo: - Age: -	UNCX	2	1.000	1.000	-	-	-	-	Mlig455_016831 {REF} {Length: 1433} {Pfam: Homeodomain [PF00046.31, score=78.6]} {Human: ENSG00000164853, UNCX, UNC homeobox, [RH, Score=176, Expect=5e-50]} {Mouse: ENSMUSG00000029546, Uncx, UNC homeobox, [RH, Score=178, Expect=1e-50]} {Dmel: FBgn0024184, unc-4, [RH, Score=168, Expect=9e-47]} {Celegans: WBGene00006744, unc-4, Homeobox protein unc-4, [RH, Score=120, Expect=1e-31]} {Smed: dd_Smed_v6_22163_0_1, dd_Smed_v6_22163_0_1, [RH, Score=166, Expect=5e-48]} {RNA1310_68888} Mlig455_065927 {REF} {Length: 1620} {Pfam: Homeodomain [PF00046.31, score=78.6]} {Human: ENSG00000164853, UNCX, UNC homeobox, [RH, Score=176, Expect=5e-50]} {Mouse: ENSMUSG00000029546, Uncx, UNC homeobox, [RH, Score=178, Expect=1e-50]} {Dmel: FBgn0024184, unc-4, [RH, Score=168, Expect=9e-47]} {Celegans: WBGene00006744, unc-4, Homeobox protein unc-4, [RH, Score=120, Expect=1e-31]} {Smed: dd_Smed_v6_22163_0_1, dd_Smed_v6_22163_0_1, [RH, Score=166, Expect=5e-48]} {RNA1310_68888}
2.	MligTC455_40687	28	0.58	Mlig455_040563, Mlig455_062078	Neo: - Age: -	PDE1C	0.957	0.957	-	-	-	-	-	Mlig455_040563 {REF} {Length: 1798} {Pfam: 3'5'-cyclic nucleotide phosphodiesterase [PF00233.21, score=268.1]; 3'5'-cyclic nucleotide phosphodiesterase N-terminal [PF08499.14, score=29.0]} {Human: ENSG00000154678, PDE1C, phosphodiesterase 1C, [Score=362, Expect=2e-117]; ENSG00000115252, PDE1A, phosphodiesterase 1A, [Score=358, Expect=2e-117]} {Mouse: ENSMUSG00000004347, Pde1c, phosphodiesterase 1C, [Score=362, Expect=5e-118]; ENSMUSG00000059173, Pde1a, phosphodiesterase 1A, calmodulin-dependent, [Score=362, Expect=7e-120]} {Dmel: FBgn0264815, Pde1c, Phosphodiesterase 1c, [Score=346, Expect=4e-108]} {Celegans: WBGene00011433, pde-1, Probable 3',5'-cyclic phosphodiesterase pde-1, [Score=347, Expect=3e-113]} {Smed: dd_Smed_v6_21546_0_1, dd_Smed_v6_21546_0_1, [Score=396, Expect=7e-133]} {RNA1310_80402} Mlig455_062078 {REF} {Length: 1807} {Pfam: 3'5'-cyclic nucleotide phosphodiesterase [PF00233.21, score=268.6]; 3'5'-cyclic nucleotide phosphodiesterase N-terminal [PF08499.14, score=29.1]} {Human: ENSG00000154678, PDE1C, phosphodiesterase 1C, [Score=356, Expect=3e-115]; ENSG00000115252, PDE1A, phosphodiesterase 1A, [Score=355, Expect=5e-116]} {Mouse: ENSMUSG00000059173, Pde1a, phosphodiesterase 1A, calmodulin-dependent, [Score=359, Expect=1e-118]; ENSMUSG00000004347, Pde1c, phosphodiesterase 1C, [Score=356, Expect=8e-116]} {Dmel: FBgn0264815, Pde1c, Phosphodiesterase 1c, [Score=347, Expect=2e-108]} {Celegans: WBGene00011433, pde-1, Probable 3',5'-cyclic phosphodiesterase pde-1, [Score=347, Expect=3e-113]} {Smed: dd_Smed_v6_26758_0_1, dd_Smed_v6_26758_0_1, [Score=394, Expect=3e-132]} {RNA1509_46211} {RNA1310_80402} {RNA815_55704}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_07477

0.21

Mlig455_016831, Mlig455_065927

Neo: -

Age: -

UNCX

1.000

MligTC455_40687

0.58

Mlig455_040563, Mlig455_062078

Neo: -

Age: -

PDE1C

0.957

Mlig455_040563 {REF} {Length: 1798} {Pfam: 3'5'-cyclic nucleotide phosphodiesterase [PF00233.21, score=268.1]; 3'5'-cyclic nucleotide phosphodiesterase N-terminal [PF08499.14, score=29.0]} {Human: ENSG00000154678, PDE1C, phosphodiesterase 1C, [Score=362, Expect=2e-117]; ENSG00000115252, PDE1A, phosphodiesterase 1A, [Score=358, Expect=2e-117]} {Mouse: ENSMUSG00000004347, Pde1c, phosphodiesterase 1C, [Score=362, Expect=5e-118]; ENSMUSG00000059173, Pde1a, phosphodiesterase 1A, calmodulin-dependent, [Score=362, Expect=7e-120]} {Dmel: FBgn0264815, Pde1c, Phosphodiesterase 1c, [Score=346, Expect=4e-108]} {Celegans: WBGene00011433, pde-1, Probable 3',5'-cyclic phosphodiesterase pde-1, [Score=347, Expect=3e-113]} {Smed: dd_Smed_v6_21546_0_1, dd_Smed_v6_21546_0_1, [Score=396, Expect=7e-133]} {RNA1310_80402}

Mlig455_062078 {REF} {Length: 1807} {Pfam: 3'5'-cyclic nucleotide phosphodiesterase [PF00233.21, score=268.6]; 3'5'-cyclic nucleotide phosphodiesterase N-terminal [PF08499.14, score=29.1]} {Human: ENSG00000154678, PDE1C, phosphodiesterase 1C, [Score=356, Expect=3e-115]; ENSG00000115252, PDE1A, phosphodiesterase 1A, [Score=355, Expect=5e-116]} {Mouse: ENSMUSG00000059173, Pde1a, phosphodiesterase 1A, calmodulin-dependent, [Score=359, Expect=1e-118]; ENSMUSG00000004347, Pde1c, phosphodiesterase 1C, [Score=356, Expect=8e-116]} {Dmel: FBgn0264815, Pde1c, Phosphodiesterase 1c, [Score=347, Expect=2e-108]} {Celegans: WBGene00011433, pde-1, Probable 3',5'-cyclic phosphodiesterase pde-1, [Score=347, Expect=3e-113]} {Smed: dd_Smed_v6_26758_0_1, dd_Smed_v6_26758_0_1, [Score=394, Expect=3e-132]} {RNA1509_46211} {RNA1310_80402} {RNA815_55704}