Data search
Results for MligTC455_07488
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_07488 | 19 | 0.39 | Mlig455_064544 | Neo: - Age: - |
Mlig455_064544 {REF} {Length: 1697} {Pfam: Replication protein A OB domain [PF16900.7, score=63.1]; PIF1-like helicase [PF05970.16, score=50.7]; OB-fold nucleic acid binding domain [PF01336.27, score=20.1]} {Celegans: WBGene00019136, F59H6.5, [Score=53.5, Expect=7e-08]} {RNA1310_54370} |
Cumulative graph for MligTC455_07488
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | - | - | - | - | |
| RegionR2 | - | - | - | - | |
| RegionR3 | - | - | - | - | |
| RegionR4 | - | - | - | - | |
| RegionR5 | - | - | - | - | |
| RegionR6 | - | - | - | - | |
| RegionR7 | - | - | - | - | |
| RegionR8 | - | - | - | - |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | - | - | - | - | |
| RegenerationR2 | - | - | - | - | |
| RegenerationR3 | - | - | - | - | |
| RegenerationR4 | - | - | - | - | |
| RegenerationR5 | - | - | - | - | |
| RegenerationR6 | - | - | - | - | |
| RegenerationBL | - | - | - | - | |
| RegenerationTP | - | - | - | - |
Genes with expression patterns similar to MligTC455_07488
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_07488 | 19 | 0.39 | Mlig455_064544 | Neo: - Age: - |
1 | - | 1.000 | - | - | - | - | Mlig455_064544 {REF} {Length: 1697} {Pfam: Replication protein A OB domain [PF16900.7, score=63.1]; PIF1-like helicase [PF05970.16, score=50.7]; OB-fold nucleic acid binding domain [PF01336.27, score=20.1]} {Celegans: WBGene00019136, F59H6.5, [Score=53.5, Expect=7e-08]} {RNA1310_54370} | |
| 2. | MligTC455_03153 | 108 | 2.25 | Mlig455_017793 | Neo: - Age: - Region-enriched R6: 8.568/0.00081 |
0.998 | - | 0.998 | - | - | - | - | Mlig455_017793 {REF} {Length: 617} {RNA1310_81068} {RNA815_46804} | |
| 3. | MligTC455_33784 | 26 | 0.55 | Mlig455_016504 | Neo: - Age: - |
ZNF45 | 0.995 | - | 0.995 | - | - | - | - | Mlig455_016504 {REF} {Length: 2178} {TRANSSPLICED} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=101.3]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=74.2]; Zinc-finger double domain [PF13465.8, score=31.8]; C2H2-type zinc finger [PF13894.8, score=30.0]; Zinc finger, C2H2 type [PF00096.28, score=26.7]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=22.8]} {Human: ENSG00000124459, ZNF45, zinc finger protein 45, [Score=84.0, Expect=3e-16]; ENSG00000235109, ZSCAN31, zinc finger and SCAN domain containing 31, [Score=82.0, Expect=3e-17]} {Mouse: ENSMUSG00000063108, Zfp26, zinc finger protein 26, [Score=82.4, Expect=8e-16]; ENSMUSG00000042097, Zfp239, zinc finger protein 239, [Score=82.0, Expect=2e-17]; ENSMUSG00000045519, Zfp560, zinc finger protein 560, [Score=81.3, Expect=2e-15]; ENSMUSG00000087598, Zfp111, zinc finger protein 111, [Score=80.5, Expect=3e-15]; ENSMUSG00000074283, Zfp109, zinc finger protein 109, [Score=79.3, Expect=5e-15]} {Dmel: FBgn0029768, SPR, Sex peptide receptor, [Score=154, Expect=1e-40]} {Celegans: WBGene00010986, sprr-1, Sex Peptide Receptor (Drosophila) Related, [Score=152, Expect=2e-39]} {Smed: dd_Smed_v6_25066_0_1, dd_Smed_v6_25066_0_1, [RH, Score=192, Expect=2e-55]} {RNA1509_48118} {RNA1310_18561} {RNA815_4024.1} |
| 4. | MligTC455_05713 | 40 | 0.83 | Mlig455_060141 | Neo: - |
SVEP1 | 0.99 | - | 0.990 | - | - | - | - | Mlig455_060141 {REF} {Length: 4520} {Pfam: Tyrosine-protein kinase ephrin type A/B receptor-like [PF07699.15, score=163.6]; MAC/Perforin domain [PF01823.21, score=56.1]; Nine Cysteines Domain of family 3 GPCR [PF07562.16, score=46.1]} {Human: ENSG00000165124, SVEP1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=68.6, Expect=1e-10]; ENSG00000146197, SCUBE3, signal peptide, CUB domain and EGF like domain containing 3, [Score=66.6, Expect=4e-10]} {Mouse: ENSMUSG00000109446, Gm9195, predicted gene 9195, [Score=94.0, Expect=1e-18]} {Dmel: FBgn0031879, uif, uninflatable, [Score=77.0, Expect=2e-13]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=73.2, Expect=2e-12]} {Smed: dd_Smed_v6_3432_0_1, dd_Smed_v6_3432_0_1, [Score=99.8, Expect=1e-22]} {RNA1509_94} {RNA1310_1237.1} {RNA815_324.1} |
| 5. | MligTC455_47083 | 1962 | 40.87 | Mlig455_059459 | Neo: - Age: Down-Down-Up Region-specific R7: 5.358 Region-enriched R7: 4.994/0.00000 Regeneration-depleted BL: -3.955 |
SLCO4A1 | 0.984 | - | 0.984 | - | - | - | - | Mlig455_059459 {REF} {Length: 4024} {Pfam: Organic Anion Transporter Polypeptide (OATP) family [PF03137.22, score=456.1]; Major Facilitator Superfamily [PF07690.18, score=59.1]; Kazal-type serine protease inhibitor domain [PF07648.17, score=21.7]} {Human: ENSG00000101187, SLCO4A1, solute carrier organic anion transporter family member 4A1, [Score=370, Expect=1e-116]} {Mouse: ENSMUSG00000038963, Slco4a1, solute carrier organic anion transporter family, member 4a1, [Score=373, Expect=7e-118]} {Dmel: FBgn0051634, Oatp26F, Organic anion transporting polypeptide 26F, [RH, Score=368, Expect=2e-116]} {Celegans: WBGene00013499, Y70G10A.3, Solute carrier organic anion transporter family member, [Score=295, Expect=3e-89]} {Smed: dd_Smed_v6_8289_0_1, dd_Smed_v6_8289_0_1, [Score=130, Expect=3e-31]} {RNA1509_12615, RNA1509_50364, RNA1509_53772} {RNA1310_4017.1, RNA1509_50364, RNA1509_53772} {RNA1509_50364, RNA1509_53772, RNA815_11331} |
| 6. | MligTC455_38412 | 204 | 4.25 | Mlig455_024382 | Neo: - Age: - |
0.981 | - | 0.981 | - | - | - | - | Mlig455_024382 {REF} {Length: 1491} {RNA1509_35191} {RNA1310_126.1} {RNA815_35412} | |
| 7. | MligTC455_24483 | 1015 | 21.14 | Mlig455_001241 | Neo: - Age: - Region-enriched R7: 2.426/0.00000 Regeneration-downregulated R6: -2.547 Regeneration-depleted R6: -2.547 |
0.972 | - | 0.972 | - | - | - | - | Mlig455_001241 {REF} {Length: 2882} {Pfam: TMEM154 protein family [PF15102.8, score=19.9]; Amnionless [PF14828.8, score=18.8]} {RNA1509_28830} {RNA1310_37428.2} {RNA815_17791} | |
| 8. | MligTC455_08369 | 90 | 1.89 | Mlig455_056096 | Neo: - Age: - |
GFI1B | 0.968 | - | 0.968 | - | - | - | - | Mlig455_056096 {REF} {Length: 1035} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=57.3]; Zinc-finger double domain [PF13465.8, score=52.1]; C2H2-type zinc finger [PF13894.8, score=46.3]} {Human: ENSG00000165702, GFI1B, growth factor independent 1B transcriptional repressor, [Score=118, Expect=2e-30]; ENSG00000162676, GFI1, growth factor independent 1 transcriptional repressor, [Score=116, Expect=2e-29]} {Mouse: ENSMUSG00000026815, Gfi1b, growth factor independent 1B, [Score=119, Expect=5e-31]; ENSMUSG00000029275, Gfi1, growth factor independent 1 transcription repressor, [Score=117, Expect=1e-29]} {Dmel: FBgn0051632, sens-2, senseless-2, [Score=119, Expect=6e-30]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [Score=121, Expect=3e-32]} {Smed: dd_Smed_v6_14824_0_1, dd_Smed_v6_14824_0_1, [Score=122, Expect=2e-32]} {RNA1310_33821.1} {RNA815_26811} |
| 9. | MligTC455_38413 | 139 | 2.89 | Mlig455_024496 | Neo: - Age: - Region-enriched R6: 4.680/0.00000 |
0.968 | - | 0.968 | - | - | - | - | Mlig455_024496 {REF} {Length: 1639} {RNA1509_35191} {RNA1310_34824.1} {RNA815_16384} | |
| 10. | MligTC455_22737 | 119 | 2.47 | Mlig455_057775 | Neo: - Age: Down-Up-Down Region-enriched R6: 5.005/0.00000 Regeneration-downregulated R6: -7.253 Regeneration-depleted R6: -7.253 |
MMEL1 | 0.961 | - | 0.961 | - | - | - | - | Mlig455_057775 {REF} {Length: 3495} {Pfam: Peptidase family M13 [PF01431.23, score=134.6]; Peptidase family M13 [PF05649.15, score=84.7]} {Human: ENSG00000277131, MMEL1, membrane metalloendopeptidase like 1, [Score=164, Expect=1e-41]; ENSG00000142606, MMEL1, membrane metalloendopeptidase like 1, [Score=164, Expect=1e-41]} {Mouse: ENSMUSG00000115293, Gm49333, predicted gene, 49333, [Score=154, Expect=3e-38]; ENSMUSG00000022842, Ece2, endothelin converting enzyme 2, [Score=152, Expect=4e-38]; ENSMUSG00000027820, Mme, membrane metallo endopeptidase, [Score=150, Expect=3e-37]} {Dmel: FBgn0031081, Nep3, Neprilysin 3, [Score=138, Expect=2e-33]} {Celegans: WBGene00020230, nep-2, Neprilysin-2, [Score=156, Expect=2e-39]} {Smed: dd_Smed_v6_8276_0_1, dd_Smed_v6_8276_0_1, [Score=148, Expect=6e-37]} {RNA1509_47798} {RNA1310_6773} {RNA815_4414} |
| 11. | MligTC455_51993 | 138 | 2.87 | Mlig455_011140 | Neo: - Age: - Region-enriched R7: 5.345/0.00000 |
0.956 | - | 0.956 | - | - | - | - | Mlig455_011140 {REF} {Length: 1829} {Smed: dd_Smed_v6_14508_0_1, dd_Smed_v6_14508_0_1, [Score=63.2, Expect=5e-12]} {RNA1509_41080} {RNA1310_48966} {RNA815_1736.1} |
Berezikov Lab - 2020-2021 © ERIBA