M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_07753

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_07753 103 2.14 Mlig455_013009

Neo: -

Age: -

 AP3D1 Mlig455_013009 {REF} {Length: 5889} {TRANSSPLICED} {Pfam: Adaptin N terminal region [PF01602.22, score=171.8]; Ankyrin repeats (3 copies) [PF12796.9, score=85.3]; Ankyrin repeats (many copies) [PF13637.8, score=74.1]; Ankyrin repeats (many copies) [PF13857.8, score=57.4]; Ankyrin repeat [PF13606.8, score=52.6]; Ankyrin repeat [PF00023.32, score=42.1]; DHHC palmitoyltransferase [PF01529.22, score=24.2]} {Human: ENSG00000065000, AP3D1, adaptor related protein complex 3 subunit delta 1, [Score=325, Expect=1e-91]} {Mouse: ENSMUSG00000020198, Ap3d1, adaptor-related protein complex 3, delta 1 subunit, [Score=331, Expect=2e-93]} {Dmel: FBgn0001087, g, garnet, [Score=328, Expect=1e-93]} {Celegans: WBGene00000162, apd-3, AP-3 complex subunit delta, [Score=273, Expect=2e-74]} {Smed: dd_Smed_v6_2534_0_1, dd_Smed_v6_2534_0_1, [Score=312, Expect=4e-88]} {RNA1509_18630, RNA1509_34140, RNA1509_43005, RNA1509_50520} {RNA1310_6018, RNA1509_18630, RNA1509_43005, RNA1509_50520} {RNA1509_18630, RNA1509_43005, RNA1509_50520, RNA815_7486}

Cumulative graph for MligTC455_07753

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.838 2.061 0.99965 1.00000
RegionR2 1.922 2.061 0.14275 0.47041
RegionR3 -0.266 2.061 0.83999 1.00000
RegionR4 1.866 2.061 0.18357 0.45520
RegionR5 1.187 2.061 0.30200 0.63779
RegionR6 -0.775 2.061 0.91879 1.00000
RegionR7 0.947 2.061 0.52906 1.00000
RegionR8 -3.042 2.061 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.292 2.061 0.99991 1.00000
RegenerationR2 0.818 2.061 0.14851 0.58171
RegenerationR3 1.57 2.061 0.12295 0.54300
RegenerationR4 0.782 2.061 0.40254 0.81495
RegenerationR5 0.739 2.061 0.34081 0.75837
RegenerationR6 2.601 2.061 0.01710 0.16156
RegenerationBL 2.963 2.061 0.04535 0.24372
RegenerationTP 1.67 2.061 0.45699 0.87243


Genes with expression patterns similar to MligTC455_07753

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_07753 103 2.14 Mlig455_013009

Neo: -

Age: -

 AP3D1 4 - - 1.000 1.000 1.000 1.000 Mlig455_013009 {REF} {Length: 5889} {TRANSSPLICED} {Pfam: Adaptin N terminal region [PF01602.22, score=171.8]; Ankyrin repeats (3 copies) [PF12796.9, score=85.3]; Ankyrin repeats (many copies) [PF13637.8, score=74.1]; Ankyrin repeats (many copies) [PF13857.8, score=57.4]; Ankyrin repeat [PF13606.8, score=52.6]; Ankyrin repeat [PF00023.32, score=42.1]; DHHC palmitoyltransferase [PF01529.22, score=24.2]} {Human: ENSG00000065000, AP3D1, adaptor related protein complex 3 subunit delta 1, [Score=325, Expect=1e-91]} {Mouse: ENSMUSG00000020198, Ap3d1, adaptor-related protein complex 3, delta 1 subunit, [Score=331, Expect=2e-93]} {Dmel: FBgn0001087, g, garnet, [Score=328, Expect=1e-93]} {Celegans: WBGene00000162, apd-3, AP-3 complex subunit delta, [Score=273, Expect=2e-74]} {Smed: dd_Smed_v6_2534_0_1, dd_Smed_v6_2534_0_1, [Score=312, Expect=4e-88]} {RNA1509_18630, RNA1509_34140, RNA1509_43005, RNA1509_50520} {RNA1310_6018, RNA1509_18630, RNA1509_43005, RNA1509_50520} {RNA1509_18630, RNA1509_43005, RNA1509_50520, RNA815_7486}
2. MligTC455_35738 32 0.66 Mlig455_043312

Neo: -

Age: -

Region-enriched R4: 7.119/0.01931

 ADGRL2 2.57 - - 0.969 - 0.757 0.844 Mlig455_043312 {REF} {Length: 3897} {Pfam: 7 transmembrane receptor (Secretin family) [PF00002.26, score=111.8]; Myc amino-terminal region [PF01056.20, score=20.2]} {Human: ENSG00000117114, ADGRL2, adhesion G protein-coupled receptor L2, [RH, Score=138, Expect=2e-33]} {Mouse: ENSMUSG00000028184, Adgrl2, adhesion G protein-coupled receptor L2, [RH, Score=139, Expect=4e-34]; ENSMUSG00000013033, Adgrl1, adhesion G protein-coupled receptor L1, [RH, Score=136, Expect=3e-33]} {Celegans: WBGene00002252, lat-2, Latrophilin-like protein LAT-2, [Score=118, Expect=1e-27]} {Smed: dd_Smed_v6_16446_0_2, dd_Smed_v6_16446_0_2, [Score=199, Expect=4e-55]} {RNA1509_25495} {RNA1310_3070} {RNA815_2153}
3. MligTC455_42466 167 3.48 Mlig455_031214

Neo: -

Age: logFC(26M/2M)=-0.318

Region-enriched R2: 3.417/0.02491

 2.482 - - 0.737 - 0.977 0.768 Mlig455_031214 {REF} {Length: 2707} {RNA1509_33423} {RNA1310_11454.1, RNA1509_33423} {RNA1509_33423, RNA815_35037}
4. MligTC455_16002 752 15.67 Mlig455_062545

Neo: -

Age: -

 TTC16 1.856 - - - - 0.904 0.952 Mlig455_062545 {REF} {Length: 2280} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF07719.19, score=82.7]; Tetratricopeptide repeat [PF00515.30, score=64.9]; TPR repeat [PF13414.8, score=58.1]; Tetratricopeptide repeat [PF13432.8, score=57.0]; Tetratricopeptide repeat [PF13181.8, score=56.4]; Tetratricopeptide repeat [PF13428.8, score=54.2]; Tetratricopeptide repeat [PF14559.8, score=42.2]; Tetratricopeptide repeat [PF13424.8, score=41.4]; Tetratricopeptide repeat [PF13371.8, score=32.2]; Tetratricopeptide repeat [PF13176.8, score=31.2]; Tetratricopeptide repeat [PF13431.8, score=24.0]; NMDA receptor-regulated protein 1 [PF12569.10, score=23.7]; Tetratricopeptide repeat [PF13174.8, score=21.3]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=19.2]} {Human: ENSG00000167094, TTC16, tetratricopeptide repeat domain 16, [RH, Score=291, Expect=3e-86]} {Mouse: ENSMUSG00000039021, Ttc16, tetratricopeptide repeat domain 16, [RH, Score=295, Expect=9e-89]} {Celegans: WBGene00000500, chn-1, C-term of Hsp70-iNteracting protein (CHIP family); Hsp70-interacting protein, [Score=50.8, Expect=1e-06]} {Smed: dd_Smed_v6_11894_0_1, dd_Smed_v6_11894_0_1, [RH, Score=447, Expect=1e-147]} {RNA1509_9009} {RNA1310_10645.1, RNA1509_9009} {RNA1509_9009, RNA815_3627}
5. MligTC455_35170 1153 24.01 Mlig455_006572, Mlig455_006732

Neo: -

Age: logFC(26M/2M)=-0.238

 SYNCRIP 1.841 - - - 0.866 0.975 -

Mlig455_006572 {REF} {Length: 3574} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=141.7]; RNA recognition motif [PF16367.7, score=35.4]; Heterogeneous nuclear ribonucleoprotein Q acidic domain [PF18360.3, score=27.6]} {Human: ENSG00000135316, SYNCRIP, synaptotagmin binding cytoplasmic RNA interacting protein, [Score=321, Expect=6e-100]; ENSG00000282958, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [Score=311, Expect=8e-96]; ENSG00000125944, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [Score=311, Expect=8e-96]} {Mouse: ENSMUSG00000032423, Syncrip, synaptotagmin binding, cytoplasmic RNA interacting protein, [Score=320, Expect=1e-99]; ENSMUSG00000066037, Hnrnpr, heterogeneous nuclear ribonucleoprotein R, [Score=311, Expect=5e-96]} {Dmel: FBgn0038826, Syp, Syncrip, [Score=338, Expect=3e-107]} {Celegans: WBGene00002000, hrp-2, HnRNP A1 homolog, [Score=272, Expect=5e-82]} {Smed: dd_Smed_v6_2228_0_1, dd_Smed_v6_2228_0_1, [Score=231, Expect=2e-66]} {RNA1509_17079} {RNA1310_1635.1, RNA1509_17079} {RNA1509_17079, RNA815_959}

Mlig455_006732 {REF} {Length: 3565} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=146.0]; RNA recognition motif [PF16367.7, score=35.6]; Heterogeneous nuclear ribonucleoprotein Q acidic domain [PF18360.3, score=27.5]} {Human: ENSG00000135316, SYNCRIP, synaptotagmin binding cytoplasmic RNA interacting protein, [Score=323, Expect=1e-100]; ENSG00000282958, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [Score=313, Expect=1e-96]; ENSG00000125944, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [Score=313, Expect=1e-96]} {Mouse: ENSMUSG00000032423, Syncrip, synaptotagmin binding, cytoplasmic RNA interacting protein, [Score=322, Expect=2e-100]; ENSMUSG00000066037, Hnrnpr, heterogeneous nuclear ribonucleoprotein R, [Score=312, Expect=1e-96]} {Dmel: FBgn0038826, Syp, Syncrip, [Score=339, Expect=7e-108]} {Celegans: WBGene00002000, hrp-2, HnRNP A1 homolog, [Score=273, Expect=3e-82]} {Smed: dd_Smed_v6_2228_0_1, dd_Smed_v6_2228_0_1, [Score=231, Expect=2e-66]} {RNA1509_17079} {RNA1310_1635.1} {RNA815_959}
6. MligTC455_35169 597 12.45 Mlig455_006683

Neo: -

Age: -

 SYNCRIP 1.84 - - - 0.863 0.977 - Mlig455_006683 {REF} {Length: 3588} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=145.9]; RNA recognition motif [PF16367.7, score=35.5]; Heterogeneous nuclear ribonucleoprotein Q acidic domain [PF18360.3, score=27.9]} {Human: ENSG00000135316, SYNCRIP, synaptotagmin binding cytoplasmic RNA interacting protein, [Score=323, Expect=2e-100]; ENSG00000282958, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [Score=313, Expect=1e-96]; ENSG00000125944, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [Score=313, Expect=1e-96]} {Mouse: ENSMUSG00000032423, Syncrip, synaptotagmin binding, cytoplasmic RNA interacting protein, [Score=322, Expect=3e-100]; ENSMUSG00000066037, Hnrnpr, heterogeneous nuclear ribonucleoprotein R, [Score=313, Expect=1e-96]} {Dmel: FBgn0038826, Syp, Syncrip, [Score=338, Expect=1e-107]} {Celegans: WBGene00002000, hrp-2, HnRNP A1 homolog, [Score=270, Expect=3e-81]} {Smed: dd_Smed_v6_2228_0_1, dd_Smed_v6_2228_0_1, [Score=231, Expect=2e-66]} {RNA1509_14954, RNA1509_17079, RNA1509_30936, RNA1509_37637} {RNA1310_1635.1, RNA1509_14954, RNA1509_30936, RNA1509_37637} {RNA1509_14954, RNA1509_30936, RNA1509_37637, RNA815_959}
7. MligTC455_17206 312 6.49 Mlig455_002084, Mlig455_002192

Neo: -

Age: -

 1.815 - - - - 0.954 0.861

Mlig455_002084 {REF} {Length: 2675} {RNA1509_14972} {RNA1310_7695.1} {RNA815_2358.1}

Mlig455_002192 {REF} {Length: 2459} {RNA1509_36449} {RNA1310_7695.1} {RNA815_2358.1}
8. MligTC455_25936 273 5.68 Mlig455_037036

Neo: -

Age: Up-Down-Down

 KIAA1841 1.813 - - - - 0.861 0.952 Mlig455_037036 {REF} {Length: 2749} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF3342) [PF11822.10, score=118.5]} {Human: ENSG00000162929, KIAA1841, KIAA1841, [Score=322, Expect=6e-99]} {Mouse: ENSMUSG00000042208, 0610010F05Rik, RIKEN cDNA 0610010F05 gene, [Score=380, Expect=5e-121]} {Dmel: FBgn0036031, CG6761, [Score=203, Expect=1e-54]} {Smed: dd_Smed_v6_11436_0_1, dd_Smed_v6_11436_0_1, [Score=335, Expect=1e-104]} {RNA1509_18348} {RNA1310_9169} {RNA815_752.1}
9. MligTC455_21086 349 7.28 Mlig455_001096

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.610

 DUSP14 1.804 - - - 0.850 - 0.954 Mlig455_001096 {REF} {Length: 2780} {TRANSSPLICED} {Pfam: Dual specificity phosphatase, catalytic domain [PF00782.22, score=111.7]} {Human: ENSG00000276023, DUSP14, dual specificity phosphatase 14, [Score=115, Expect=8e-31]; ENSG00000275932, DUSP14, dual specificity phosphatase 14, [Score=115, Expect=8e-31]} {Mouse: ENSMUSG00000018648, Dusp14, dual specificity phosphatase 14, [Score=116, Expect=2e-31]} {Dmel: FBgn0243512, puc, puckered, [Score=95.1, Expect=4e-22]} {Celegans: WBGene00007302, C04F12.8, [Score=145, Expect=5e-42]} {Smed: dd_Smed_v6_8557_0_1, dd_Smed_v6_8557_0_1, [Score=136, Expect=6e-38]} {RNA1509_25505} {RNA1310_8130.1} {RNA815_13956}
10. MligTC455_44366 1536 32 Mlig455_002673

Neo: -

Age: logFC(26M/2M)=-0.411

 MYCBPAP 1.784 - - - - 0.822 0.962 Mlig455_002673 {REF} {Length: 3090} {Pfam: MYCBP-associated protein family [PF14646.8, score=366.5]} {Human: ENSG00000136449, MYCBPAP, MYCBP associated protein, [RH, Score=280, Expect=3e-80]} {Mouse: ENSMUSG00000039110, Mycbpap, MYCBP associated protein, [RH, Score=270, Expect=4e-77]} {Smed: dd_Smed_v6_11993_0_1, dd_Smed_v6_11993_0_1, [RH, Score=326, Expect=4e-98]} {RNA1509_4206} {RNA1310_3498.3} {RNA815_1306}
11. MligTC455_44365 1412 29.41 Mlig455_002492

Neo: -

Age: logFC(26M/2M)=0.553

 MYCBPAP 1.726 - - - - 0.767 0.959 Mlig455_002492 {REF} {Length: 3081} {Pfam: MYCBP-associated protein family [PF14646.8, score=368.3]} {Human: ENSG00000136449, MYCBPAP, MYCBP associated protein, [RH, Score=280, Expect=2e-80]} {Mouse: ENSMUSG00000039110, Mycbpap, MYCBP associated protein, [RH, Score=276, Expect=5e-79]} {Smed: dd_Smed_v6_11993_0_1, dd_Smed_v6_11993_0_1, [RH, Score=323, Expect=3e-97]} {RNA1509_4206} {RNA1310_3498.3} {RNA815_1306}
12. MligTC455_26414 375 7.8 Mlig455_001503

Neo: -

Age: -

 1.706 - - - - 0.954 0.752 Mlig455_001503 {REF} {Length: 3655} {TRANSSPLICED} {Pfam: Family of unknown function (DUF5580) [PF17743.3, score=85.6]} {Smed: dd_Smed_v6_9326_0_1, dd_Smed_v6_9326_0_1, [Score=167, Expect=1e-44]} {RNA1509_4141} {RNA1310_6622.2} {RNA815_8857}
13. MligTC455_45557 629 13.1 Mlig455_015721

Neo: -

Age: -

Region-enriched R2: 1.212/0.04087

 DYNLT1 1.704 - - - - 0.746 0.958 Mlig455_015721 {REF} {Length: 1742} {TRANSSPLICED} {Pfam: Tctex-1 family [PF03645.15, score=89.2]} {Human: ENSG00000146425, DYNLT1, dynein light chain Tctex-type 1, [RH, Score=165, Expect=5e-49]} {Mouse: ENSMUSG00000092074, Dynlt1a, dynein light chain Tctex-type 1A, [RH, Score=161, Expect=8e-48]; ENSMUSG00000095677, Dynlt1f, dynein light chain Tctex-type 1F, [RH, Score=161, Expect=8e-48]; ENSMUSG00000000579, Dynlt1c, dynein light chain Tctex-type 1C, [RH, Score=161, Expect=8e-48]; ENSMUSG00000096255, Dynlt1b, dynein light chain Tctex-type 1B, [RH, Score=161, Expect=8e-48]} {Dmel: FBgn0024432, Dlc90F, Dynein light chain 90F, [Score=138, Expect=3e-39]} {Smed: dd_Smed_v6_1166_0_1, dd_Smed_v6_1166_0_1, [RH, Score=171, Expect=5e-52]} {RNA1509_42217} {RNA1310_25091} {RNA815_10285.1}
14. MligTC455_23117 272 5.68 Mlig455_001934, Mlig455_016856, Mlig455_035192, Mlig455_057244, Mlig455_065915, Mlig455_070017

Neo: -

Age: -

 B4GALT1 1.695 - - 0.961 - 0.734 -

Mlig455_001934 {REF} {Length: 2391} {Pfam: Major surface glycoprotein [PF02349.17, score=23.1]} {RNA1509_15799} {RNA1310_79161} {RNA815_41132}

Mlig455_016856 {REF} {Length: 2368} {Pfam: N-terminal region of glycosyl transferase group 7 [PF13733.8, score=91.5]; N-terminal domain of galactosyltransferase [PF02709.16, score=60.4]} {Human: ENSG00000086062, B4GALT1, beta-1,4-galactosyltransferase 1, [Score=157, Expect=1e-43]} {Mouse: ENSMUSG00000028413, B4galt1, UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1, [Score=152, Expect=1e-41]} {Dmel: FBgn0039625, beta4GalNAcTB, [Score=140, Expect=5e-38]} {Celegans: WBGene00000269, bre-4, Beta-1,4-N-acetylgalactosaminyltransferase bre-4, [Score=132, Expect=1e-34]} {Smed: dd_Smed_v6_12436_0_1, dd_Smed_v6_12436_0_1, [Score=143, Expect=3e-39]} {RNA1509_15799} {RNA1310_1862} {RNA815_18283}

Mlig455_035192 {REF} {Length: 983} {NoTransDecoderORF} {RNA1509_15799} {RNA1310_139915} {RNA815_19515}

Mlig455_057244 {REF} {Length: 1208} {Pfam: Integrase core domain [PF00665.28, score=31.9]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=95.5, Expect=2e-22]} {RNA1509_15799} {RNA1310_1745} {RNA815_1718}

Mlig455_065915 {REF} {Length: 2187} {Pfam: N-terminal region of glycosyl transferase group 7 [PF13733.8, score=121.6]; N-terminal domain of galactosyltransferase [PF02709.16, score=60.3]} {Human: ENSG00000086062, B4GALT1, beta-1,4-galactosyltransferase 1, [Score=171, Expect=2e-48]} {Mouse: ENSMUSG00000028413, B4galt1, UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1, [Score=166, Expect=1e-46]} {Dmel: FBgn0039625, beta4GalNAcTB, [Score=154, Expect=3e-43]} {Celegans: WBGene00000269, bre-4, Beta-1,4-N-acetylgalactosaminyltransferase bre-4, [Score=149, Expect=6e-41]} {Smed: dd_Smed_v6_12436_0_1, dd_Smed_v6_12436_0_1, [Score=164, Expect=4e-47]} {RNA1509_15799} {RNA1310_1862} {RNA815_18283}

Mlig455_070017 {REF} {Length: 1620} {Pfam: N-terminal region of glycosyl transferase group 7 [PF13733.8, score=121.6]; N-terminal domain of galactosyltransferase [PF02709.16, score=60.3]} {Human: ENSG00000086062, B4GALT1, beta-1,4-galactosyltransferase 1, [Score=171, Expect=1e-48]} {Mouse: ENSMUSG00000028413, B4galt1, UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1, [Score=165, Expect=1e-46]} {Dmel: FBgn0039625, beta4GalNAcTB, [Score=154, Expect=3e-43]} {Celegans: WBGene00000269, bre-4, Beta-1,4-N-acetylgalactosaminyltransferase bre-4, [Score=149, Expect=7e-41]} {Smed: dd_Smed_v6_12436_0_1, dd_Smed_v6_12436_0_1, [Score=164, Expect=5e-47]} {RNA1509_15799} {RNA1310_1862} {RNA815_18283}
15. MligTC455_53970 811 16.9 Mlig455_057137

Neo: -

Age: logFC(26M/2M)=-0.190

 PTPN4 1.678 - - - 0.954 0.724 - Mlig455_057137 {REF} {Length: 5387} {TRANSSPLICED} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=224.7]; FERM N-terminal domain [PF09379.12, score=77.6]; FERM C-terminal PH-like domain [PF09380.12, score=69.5]; FERM central domain [PF00373.20, score=66.0]; PDZ domain [PF00595.26, score=62.4]; FERM adjacent (FA) [PF08736.13, score=42.9]; Tyrosine phosphatase family [PF13350.8, score=20.2]} {Human: ENSG00000088179, PTPN4, protein tyrosine phosphatase, non-receptor type 4, [Score=756, Expect=0.0]} {Mouse: ENSMUSG00000026384, Ptpn4, protein tyrosine phosphatase, non-receptor type 4, [Score=769, Expect=0.0]} {Dmel: FBgn0261985, Ptpmeg, Protein tyrosine phosphatase Meg, [RH, Score=378, Expect=5e-115]} {Celegans: WBGene00004213, ptp-1, Tyrosine-protein phosphatase 1, [Score=417, Expect=3e-134]} {Smed: dd_Smed_v6_6928_0_2, dd_Smed_v6_6928_0_2, [Score=484, Expect=6e-155]} {RNA1509_4606} {RNA1310_4025, RNA1509_4606} {RNA1509_4606, RNA815_540.1}
16. MligTC455_33640 485 10.11 Mlig455_060597

Neo: -

Age: -

 NFAT5 1.677 - - - 0.709 0.968 - Mlig455_060597 {REF} {Length: 5272} {TRANSSPLICED} {Pfam: Rel homology DNA-binding domain [PF00554.24, score=72.3]; Rel homology dimerisation domain [PF16179.7, score=71.4]; IPT/TIG domain [PF01833.26, score=19.1]} {Human: ENSG00000102908, NFAT5, nuclear factor of activated T cells 5, [RH, Score=309, Expect=3e-88]} {Mouse: ENSMUSG00000003847, Nfat5, nuclear factor of activated T cells 5, [RH, Score=310, Expect=1e-88]} {Dmel: FBgn0030505, NFAT, NFAT nuclear factor, [RH, Score=270, Expect=4e-75]} {Smed: dd_Smed_v6_5978_0_1, dd_Smed_v6_5978_0_1, [RH, Score=350, Expect=1e-106]} {RNA1509_41291} {RNA1310_4624} {RNA815_17841}
17. MligTC455_31749 1838 38.3 Mlig455_020443

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.286

Regeneration-upregulated R2: 1.121

Regeneration-enriched R2: 1.121

 PCCA 1.657 - - 0.700 - - 0.957 Mlig455_020443 {REF} {Length: 2930} {TRANSSPLICED} {Pfam: Carbamoyl-phosphate synthase L chain, ATP binding domain [PF02786.19, score=272.9]; Biotin carboxylase, N-terminal domain [PF00289.24, score=146.4]; Biotin carboxylase C-terminal domain [PF02785.21, score=118.5]; Propionyl-coenzyme A carboxylase BT domain [PF18140.3, score=67.1]; Biotin-requiring enzyme [PF00364.24, score=57.8]; Biotin-lipoyl like [PF13533.8, score=37.6]; D-ala D-ala ligase C-terminus [PF07478.15, score=33.2]; ATP-grasp domain [PF02222.24, score=29.6]; RimK-like ATP-grasp domain [PF08443.13, score=23.5]; ATP-grasp domain [PF02655.16, score=20.7]} {Human: ENSG00000175198, PCCA, propionyl-CoA carboxylase subunit alpha, [RH, Score=846, Expect=0.0]} {Mouse: ENSMUSG00000041650, Pcca, propionyl-Coenzyme A carboxylase, alpha polypeptide, [RH, Score=861, Expect=0.0]} {Dmel: FBgn0039877, CG2118, [Score=456, Expect=4e-151]} {Celegans: WBGene00017864, pcca-1, Propionyl-CoA carboxylase alpha chain, mitochondrial, [RH, Score=830, Expect=0.0]} {Smed: dd_Smed_v6_1247_0_1, dd_Smed_v6_1247_0_1, [RH, Score=1027, Expect=0.0]} {RNA1509_275, RNA1509_7921} {RNA1310_9293.1, RNA1509_7921} {RNA1509_7921, RNA815_1830.1}
18. MligTC455_32432 118 2.46 Mlig455_014378

Neo: -

Age: -

 0.973 - - - - - 0.973 Mlig455_014378 {REF} {Length: 1456} {TRANSSPLICED} {RNA1509_58713} {RNA1310_36304} {RNA815_14805}
19. MligTC455_31237 296 6.17 Mlig455_000269, Mlig455_008139, Mlig455_021209, Mlig455_026380, Mlig455_032273, Mlig455_058349, Mlig455_063975, Mlig455_067401, Mlig455_068490

Neo: -

Age: -

 0.964 - - - - - 0.964

Mlig455_000269 {REF} {Length: 1432} {TRANSSPLICED} {RNA1509_24158} {RNA1310_29498} {RNA815_13329}

Mlig455_008139 {REF} {Length: 667} {RNA1310_29498} {RNA815_13329}

Mlig455_021209 {REF} {Length: 1075} {TRANSSPLICED} {RNA1509_24158} {RNA1310_3578.2} {RNA815_12643}

Mlig455_026380 {REF} {Length: 1243} {TRANSSPLICED} {RNA1509_24158} {RNA1310_3578.2} {RNA815_12643}

Mlig455_032273 {REF} {Length: 2825} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=19.4]} {RNA1509_49623} {RNA1310_730.1} {RNA815_12643}

Mlig455_058349 {REF} {Length: 3430} {RNA1509_24069} {RNA1310_3578.1} {RNA815_35726}

Mlig455_063975 {REF} {Length: 2013} {RNA1509_24158} {RNA1310_730.1} {RNA815_12643}

Mlig455_067401 {REF} {Length: 1192} {RNA1509_24158} {RNA1310_29498} {RNA815_13329}

Mlig455_068490 {REF} {Length: 1295} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=24.6]} {RNA1509_49623} {RNA1310_57742} {RNA815_63485}
20. MligTC455_32894 528 11 Mlig455_006799, Mlig455_054736

Neo: -

Age: logFC(26M/2M)=-0.373

 ANK3 0.964 - - - - - 0.964

Mlig455_006799 {REF} {Length: 2211} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=199.6]; Ankyrin repeats (many copies) [PF13637.8, score=140.6]; Ankyrin repeats (many copies) [PF13857.8, score=101.3]; Ankyrin repeat [PF13606.8, score=91.0]; Ankyrin repeat [PF00023.32, score=74.7]} {Human: ENSG00000151150, ANK3, ankyrin 3, [Score=116, Expect=2e-27]; ENSG00000065413, ANKRD44, ankyrin repeat domain 44, [Score=114, Expect=2e-26]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=114, Expect=1e-26]; ENSMUSG00000052331, Ankrd44, ankyrin repeat domain 44, [Score=113, Expect=1e-26]} {Dmel: FBgn0011747, Ank, Ankyrin, [Score=102, Expect=7e-23]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=101, Expect=7e-23]} {Smed: dd_Smed_v6_13251_0_1, dd_Smed_v6_13251_0_1, [RH, Score=224, Expect=8e-69]} {RNA1509_50010} {RNA1310_23872} {RNA815_11047.1}

Mlig455_054736 {REF} {Length: 2242} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=187.9]; Ankyrin repeats (many copies) [PF13637.8, score=141.3]; Ankyrin repeats (many copies) [PF13857.8, score=101.2]; Ankyrin repeat [PF13606.8, score=89.9]; Ankyrin repeat [PF00023.32, score=74.0]} {Human: ENSG00000151150, ANK3, ankyrin 3, [Score=116, Expect=2e-27]; ENSG00000065413, ANKRD44, ankyrin repeat domain 44, [Score=115, Expect=3e-27]} {Mouse: ENSMUSG00000052331, Ankrd44, ankyrin repeat domain 44, [Score=115, Expect=3e-27]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=114, Expect=1e-26]} {Dmel: FBgn0011747, Ank, Ankyrin, [Score=102, Expect=7e-23]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=101, Expect=7e-23]} {Smed: dd_Smed_v6_13251_0_1, dd_Smed_v6_13251_0_1, [RH, Score=224, Expect=7e-69]} {RNA1509_45433, RNA1509_50010} {RNA1310_23872, RNA1509_45433, RNA1509_50010} {RNA1509_45433, RNA1509_50010, RNA815_11047.1}
21. MligTC455_41632 1020 21.26 Mlig455_031169

Neo: -

Age: -

 IQUB 0.961 - - - - - 0.961 Mlig455_031169 {REF} {Length: 3147} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=29.5]} {Human: ENSG00000164675, IQUB, IQ motif and ubiquitin domain containing, [RH, Score=582, Expect=0.0]} {Mouse: ENSMUSG00000046192, Iqub, IQ motif and ubiquitin domain containing, [RH, Score=545, Expect=0.0]} {Dmel: FBgn0038960, CG13855, [RH, Score=241, Expect=2e-68]} {Smed: dd_Smed_v6_9227_0_1, dd_Smed_v6_9227_0_1, [RH, Score=585, Expect=0.0]} {RNA1509_27336, RNA1509_6305} {RNA1310_4747.1, RNA1509_27336, RNA1509_6305} {RNA1509_27336, RNA1509_6305, RNA815_1419.1}
22. MligTC455_50109 681 14.18 Mlig455_035951

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.431

 COP1 0.955 - - - - - 0.955 Mlig455_035951 {REF} {Length: 2678} {Pfam: Ring finger domain [PF13639.8, score=20.7]} {Human: ENSG00000143207, COP1, COP1, E3 ubiquitin ligase, [RH, Score=47.8, Expect=2e-06]} {Smed: dd_Smed_v6_2170_0_1, dd_Smed_v6_2170_0_1, [Score=164, Expect=7e-45]} {RNA1509_12012} {RNA1310_3106, RNA1509_12012} {RNA1509_12012, RNA815_15680}
23. MligTC455_54261 134 2.8 Mlig455_059557

Neo: -

Age: Up-Down-Down

 SLC27A4 0.955 - - 0.955 - - - Mlig455_059557 {REF} {Length: 3920} {TRANSSPLICED} {Pfam: AMP-binding enzyme [PF00501.30, score=240.8]; AMP-binding enzyme C-terminal domain [PF13193.8, score=30.4]} {Human: ENSG00000167114, SLC27A4, solute carrier family 27 member 4, [RH, Score=640, Expect=0.0]; ENSG00000130304, SLC27A1, solute carrier family 27 member 1, [RH, Score=613, Expect=0.0]} {Mouse: ENSMUSG00000059316, Slc27a4, solute carrier family 27 (fatty acid transporter), member 4, [RH, Score=627, Expect=0.0]; ENSMUSG00000031808, Slc27a1, solute carrier family 27 (fatty acid transporter), member 1, [RH, Score=620, Expect=0.0]} {Dmel: FBgn0267828, Fatp, Fatty acid (long chain) transport protein, [RH, Score=592, Expect=0.0]} {Celegans: WBGene00017012, acs-22, Fatty Acid CoA Synthetase family, [RH, Score=494, Expect=1e-167]} {Smed: dd_Smed_v6_4057_0_1, dd_Smed_v6_4057_0_1, [RH, Score=635, Expect=0.0]} {RNA1509_18148} {RNA1310_5176, RNA1509_18148} {RNA1509_18148, RNA815_3662}
24. MligTC455_43915 108 2.25 Mlig455_034706, Mlig455_034759

Neo: -

Age: -

 0.954 - - - - - 0.954

Mlig455_034706 {REF} {Length: 2595} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=69.8]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=26.6]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=21.3]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=20.6]} {Mouse: ENSMUSG00000045730, Adrb2, adrenergic receptor, beta 2, [Score=51.2, Expect=2e-06]} {Smed: dd_Smed_v6_14726_0_1, dd_Smed_v6_14726_0_1, [RH, Score=211, Expect=3e-64]} {RNA1509_52922} {RNA1310_24549} {RNA815_24174}

Mlig455_034759 {REF} {Length: 2597} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=69.8]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=26.6]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=21.3]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=20.6]} {Mouse: ENSMUSG00000045730, Adrb2, adrenergic receptor, beta 2, [Score=51.2, Expect=2e-06]} {Smed: dd_Smed_v6_14726_0_1, dd_Smed_v6_14726_0_1, [RH, Score=211, Expect=3e-64]} {RNA1509_52922} {RNA1310_24549, RNA1509_52922} {RNA1509_52922, RNA815_24174}
25. MligTC455_49636 558 11.63 Mlig455_050883

Neo: -

Age: logFC(26M/2M)=0.482

 WDR88 0.953 - - - - - 0.953 Mlig455_050883 {REF} {Length: 1337} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=99.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=24.8]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=21.6]} {Human: ENSG00000166359, WDR88, WD repeat domain 88, [RH, Score=246, Expect=2e-76]} {Mouse: ENSMUSG00000106911, Snrnp40, small nuclear ribonucleoprotein 40 (U5), [Score=122, Expect=8e-31]; ENSMUSG00000074088, Snrnp40, small nuclear ribonucleoprotein 40 (U5), [Score=122, Expect=8e-31]} {Dmel: FBgn0015754, Lis-1, Lissencephaly-1, [Score=90.1, Expect=2e-19]} {Celegans: WBGene00003047, lis-1, Lissencephaly-1 homolog, [Score=83.6, Expect=2e-17]} {Smed: dd_Smed_v6_12057_0_2, dd_Smed_v6_12057_0_2, [RH, Score=291, Expect=1e-95]} {RNA1509_14225} {RNA1310_25278} {RNA815_11177}
26. MligTC455_24712 208 4.32 Mlig455_044659

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_044659 {REF} {Length: 1720} {NoTransDecoderORF} {RNA1310_99438}
27. MligTC455_37256 2621 54.6 Mlig455_048728, Mlig455_059723

Neo: -

Age: logFC(26M/2M)=0.729

 GAS8 0.952 - - - - - 0.952

Mlig455_048728 {REF} {Length: 2304} {Pfam: Growth-arrest specific micro-tubule binding [PF13851.8, score=274.6]} {Human: ENSG00000141013, GAS8, growth arrest specific 8, [RH, Score=635, Expect=0.0]} {Mouse: ENSMUSG00000040220, Gas8, growth arrest specific 8, [RH, Score=630, Expect=0.0]} {Dmel: FBgn0029667, Gas8, Growth arrest specific protein 8, [RH, Score=372, Expect=2e-124]} {Smed: dd_Smed_v6_2848_0_1, dd_Smed_v6_2848_0_1, [RH, Score=667, Expect=0.0]} {RNA1509_29434, RNA1509_3594, RNA1509_45356, RNA1509_4695, RNA1509_48878, RNA1509_7976} {RNA1310_10753.1, RNA1509_29434, RNA1509_3594, RNA1509_45356, RNA1509_4695, RNA1509_48878, RNA1509_7976} {RNA1509_29434, RNA1509_3594, RNA1509_45356, RNA1509_4695, RNA1509_48878, RNA1509_7976, RNA815_4143}

Mlig455_059723 {REF} {Length: 2296} {Pfam: Growth-arrest specific micro-tubule binding [PF13851.8, score=270.3]} {Human: ENSG00000141013, GAS8, growth arrest specific 8, [RH, Score=629, Expect=0.0]} {Mouse: ENSMUSG00000040220, Gas8, growth arrest specific 8, [RH, Score=624, Expect=0.0]} {Dmel: FBgn0029667, Gas8, Growth arrest specific protein 8, [RH, Score=368, Expect=5e-123]} {Smed: dd_Smed_v6_2848_0_1, dd_Smed_v6_2848_0_1, [RH, Score=662, Expect=0.0]} {RNA1509_4695} {RNA1310_10753.1} {RNA815_4143}
28. MligTC455_10454 39 0.81 Mlig455_009673

Neo: -

Age: -

 DNASE2B 0.951 - - - - 0.951 - Mlig455_009673 {REF} {Length: 3264} {Pfam: Deoxyribonuclease II [PF03265.17, score=170.0]} {Human: ENSG00000137976, DNASE2B, deoxyribonuclease 2 beta, [Score=117, Expect=2e-28]} {Mouse: ENSMUSG00000028185, Dnase2b, deoxyribonuclease II beta, [Score=128, Expect=2e-32]} {Dmel: FBgn0000477, DNaseII, Deoxyribonuclease II, [Score=95.9, Expect=3e-21]} {Celegans: WBGene00000799, crn-6, Cell death-related nuclease 6, [Score=103, Expect=8e-24]} {Smed: dd_Smed_v6_1691_0_1, dd_Smed_v6_1691_0_1, [Score=113, Expect=2e-27]} {RNA1509_52192} {RNA1310_16913} {RNA815_10835}
29. MligTC455_01039 20 0.41 Mlig455_009672

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_009672 {REF} {Length: 382} {RNA1310_75650} {RNA815_50998}
30. MligTC455_14655 504 10.51 Mlig455_032155, Mlig455_032161

Neo: -

Age: Down-Down-Up

 0.95 - - - - - 0.950

Mlig455_032155 {REF} {Length: 977} {Pfam: Ectodermal ciliogenesis protein [PF15795.7, score=76.8]} {RNA1310_42665.1} {RNA815_17724}

Mlig455_032161 {REF} {Length: 351} {NoTransDecoderORF} {RNA1310_42665.2} {RNA815_17724}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA