Data search
Results for MligTC455_07783
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_07783 | 32 | 0.66 | Mlig455_001099 | Neo: - Age: - |
MAP3K19 | Mlig455_001099 {REF} {Length: 2929} {Pfam: Protein kinase domain [PF00069.27, score=154.5]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=99.5]; Phosphotransferase enzyme family [PF01636.25, score=25.1]; Fungal protein kinase [PF17667.3, score=20.7]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=131, Expect=6e-32]; ENSG00000165238, WNK2, WNK lysine deficient protein kinase 2, [Score=125, Expect=3e-29]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=129, Expect=1e-30]; ENSMUSG00000041245, Wnk3, WNK lysine deficient protein kinase 3, [Score=126, Expect=6e-30]; ENSMUSG00000037989, Wnk2, WNK lysine deficient protein kinase 2, [Score=124, Expect=5e-29]} {Dmel: FBgn0266465, GckIII, Germinal centre kinase III, [Score=106, Expect=9e-24]} {Celegans: WBGene00006443, pak-2, Serine/threonine-protein kinase pak-2, [Score=115, Expect=6e-27]} {Smed: dd_Smed_v6_6304_0_1, dd_Smed_v6_6304_0_1, [Score=111, Expect=2e-27]} {RNA1509_41752} {RNA1310_11089} {RNA815_13281} |
Cumulative graph for MligTC455_07783
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.445 | 1.093 | 1.00000 | 1.00000 | |
| RegionR2 | 3.449 | 1.093 | 0.06304 | 0.30325 | |
| RegionR3 | 2.907 | 1.093 | 0.00873 | 0.13973 | |
| RegionR4 | -2.251 | 1.093 | 0.99448 | 1.00000 | |
| RegionR5 | -1.47 | 1.093 | 0.98084 | 1.00000 | |
| RegionR6 | 1.213 | 1.093 | 0.41207 | 0.98114 | |
| RegionR7 | 2.29 | 1.093 | 0.28001 | 0.91266 | |
| RegionR8 | -0.692 | 1.093 | 1.00000 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 4.846 | 1.093 | 1.00000 | 1.00000 | |
| RegenerationR2 | -0.981 | 1.093 | 0.39847 | 0.81398 | |
| RegenerationR3 | 1.152 | 1.093 | 0.19416 | 0.62981 | |
| RegenerationR4 | 3.204 | 1.093 | 0.01288 | 0.17532 | |
| RegenerationR5 | 3.005 | 1.093 | 0.01097 | 0.18494 | |
| RegenerationR6 | 1.199 | 1.093 | 0.36340 | 0.70755 | |
| RegenerationBL | -0.981 | 1.093 | 1.00000 | 1.00000 | |
| RegenerationTP | 4.317 | 1.093 | 0.03287 | 0.30333 |
Genes with expression patterns similar to MligTC455_07783
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_07783 | 32 | 0.66 | Mlig455_001099 | Neo: - Age: - |
MAP3K19 | 4 | 1.000 | 1.000 | - | - | 1.000 | 1.000 | Mlig455_001099 {REF} {Length: 2929} {Pfam: Protein kinase domain [PF00069.27, score=154.5]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=99.5]; Phosphotransferase enzyme family [PF01636.25, score=25.1]; Fungal protein kinase [PF17667.3, score=20.7]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=131, Expect=6e-32]; ENSG00000165238, WNK2, WNK lysine deficient protein kinase 2, [Score=125, Expect=3e-29]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=129, Expect=1e-30]; ENSMUSG00000041245, Wnk3, WNK lysine deficient protein kinase 3, [Score=126, Expect=6e-30]; ENSMUSG00000037989, Wnk2, WNK lysine deficient protein kinase 2, [Score=124, Expect=5e-29]} {Dmel: FBgn0266465, GckIII, Germinal centre kinase III, [Score=106, Expect=9e-24]} {Celegans: WBGene00006443, pak-2, Serine/threonine-protein kinase pak-2, [Score=115, Expect=6e-27]} {Smed: dd_Smed_v6_6304_0_1, dd_Smed_v6_6304_0_1, [Score=111, Expect=2e-27]} {RNA1509_41752} {RNA1310_11089} {RNA815_13281} |
| 2. | MligTC455_46864 | 116 | 2.43 | Mlig455_014247 | Neo: - Age: Down-Up-Down |
RASSF5 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_014247 {REF} {Length: 2930} {TRANSSPLICED} {Pfam: Ras association (RalGDS/AF-6) domain [PF00788.25, score=33.9]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=31.5]; Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain [PF16517.7, score=30.1]} {Human: ENSG00000266094, RASSF5, Ras association domain family member 5, [Score=76.3, Expect=5e-15]; ENSG00000068028, RASSF1, Ras association domain family member 1, [Score=76.3, Expect=5e-15]} {Mouse: ENSMUSG00000010067, Rassf1, Ras association (RalGDS/AF-6) domain family member 1, [Score=82.0, Expect=4e-17]} {Celegans: WBGene00011995, rsf-1, RASSF (Ras-association domain family) homolog, [Score=98.2, Expect=5e-22]} {Smed: dd_Smed_v6_5323_0_1, dd_Smed_v6_5323_0_1, [Score=110, Expect=2e-26]} {RNA1509_20974} {RNA1310_11862} {RNA815_13937} |
| 3. | MligTC455_21342 | 126 | 2.62 | Mlig455_012219 | Neo: - Age: - |
0.955 | - | - | - | - | - | 0.955 | Mlig455_012219 {REF} {Length: 3675} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=20.3]} {RNA1310_28332} {RNA815_14782} | |
| 4. | MligTC455_38556 | 168 | 3.5 | Mlig455_049546 | Neo: - Age: logFC(26M/2M)=-0.547 Region-enriched R3: 4.481/0.00055 |
AMY1C | 0.953 | 0.953 | - | - | - | - | - | Mlig455_049546 {REF} {Length: 2273} {Pfam: Alpha amylase, catalytic domain [PF00128.26, score=54.2]; Alpha amylase, C-terminal all-beta domain [PF02806.20, score=41.8]} {Human: ENSG00000187733, AMY1C, amylase, alpha 1C (salivary), [RH, Score=592, Expect=0.0]; ENSG00000237763, AMY1A, amylase, alpha 1A (salivary), [RH, Score=592, Expect=0.0]; ENSG00000174876, AMY1B, amylase, alpha 1B (salivary), [RH, Score=592, Expect=0.0]; ENSG00000240038, AMY2B, amylase, alpha 2B (pancreatic), [RH, Score=591, Expect=0.0]; ENSG00000243480, AMY2A, amylase, alpha 2A (pancreatic), [RH, Score=588, Expect=0.0]} {Mouse: ENSMUSG00000074264, Amy1, amylase 1, salivary, [RH, Score=584, Expect=0.0]; ENSMUSG00000096770, Amy2a4, amylase 2a4, [RH, Score=575, Expect=0.0]; ENSMUSG00000096569, Amy2a2, amylase 2a2, [RH, Score=575, Expect=0.0]; ENSMUSG00000093931, Amy2a3, amylase 2a3, [RH, Score=575, Expect=0.0]; ENSMUSG00000074268, Amy2a5, amylase 2a5, [RH, Score=575, Expect=0.0]} {Dmel: FBgn0000078, Amy-d, Amylase distal, [RH, Score=492, Expect=5e-171]} {Celegans: WBGene00008220, C50B6.7, Alpha-amylase, [Score=359, Expect=2e-116]} {RNA1509_1421} {RNA1310_11165, RNA1509_1421} {RNA1509_1421, RNA815_3708.1} |
| 5. | MligTC455_38123 | 2050 | 42.71 | Mlig455_057082 | Neo: - Age: logFC(26M/2M)=0.478 Regeneration-downregulated BL: -2.362 Regeneration-depleted BL: -2.362 |
0.951 | - | - | - | - | - | 0.951 | Mlig455_057082 {REF} {Length: 3011} {RNA1509_38657, RNA1509_44276} {RNA1310_24496, RNA1509_38657, RNA1509_44276} {RNA1509_38657, RNA1509_44276, RNA815_15233} |
Berezikov Lab - 2020-2021 © ERIBA