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Results for MligTC455_07803

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_07803 109 2.26 Mlig455_005324, Mlig455_071070

Neo: -

Age: -

Mlig455_005324 {REF} {Length: 1189} {Smed: dd_Smed_v6_8128_0_8, dd_Smed_v6_8128_0_8, [Score=49.7, Expect=5e-08]} {RNA1509_12203} {RNA1310_718} {RNA815_1913}

Mlig455_071070 {REF} {Length: 103} {NoTransDecoderORF} {RNA1509_46750} {RNA1310_148349} {RNA815_8676}

Cumulative graph for MligTC455_07803

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.52 2.039 0.50211 1.00000
RegionR2 0.913 2.039 0.31804 0.70898
RegionR3 0.112 2.039 0.87830 1.00000
RegionR4 -0.392 2.039 0.61794 0.92824
RegionR5 1.208 2.039 0.05890 0.21049
RegionR6 1.055 2.039 0.14705 0.68435
RegionR7 -0.392 2.039 0.72846 1.00000
RegionR8 -0.985 2.039 0.51125 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -4.409 2.039 0.49016 1.00000
RegenerationR2 -2.711 2.039 0.00073 0.03825
RegenerationR3 -1.362 2.039 0.10006 0.50393
RegenerationR4 0.18 2.039 0.80263 0.98720
RegenerationR5 -2.343 2.039 0.00086 0.04871
RegenerationR6 -0.568 2.039 0.42948 0.75775
RegenerationBL -0.718 2.039 0.56136 0.91640
RegenerationTP -1.891 2.039 0.27965 0.72697


Genes with expression patterns similar to MligTC455_07803

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_07803 109 2.26 Mlig455_005324, Mlig455_071070

Neo: -

Age: -

 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_005324 {REF} {Length: 1189} {Smed: dd_Smed_v6_8128_0_8, dd_Smed_v6_8128_0_8, [Score=49.7, Expect=5e-08]} {RNA1509_12203} {RNA1310_718} {RNA815_1913}

Mlig455_071070 {REF} {Length: 103} {NoTransDecoderORF} {RNA1509_46750} {RNA1310_148349} {RNA815_8676}
2. MligTC455_28114 16 0.33 Mlig455_002413

Neo: -

Age: -

 1.769 - - - 0.802 0.967 - Mlig455_002413 {REF} {Length: 1446} {TRANSSPLICED} {RNA1310_53298} {RNA815_30466}
3. MligTC455_11869 19 0.4 Mlig455_035289

Neo: -

Age: -

 RBM28 0.977 - - - - 0.977 - Mlig455_035289 {REF} {Length: 2091} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=75.2]; Universal stress protein family [PF00582.28, score=71.7]} {Human: ENSG00000106344, RBM28, RNA binding motif protein 28, [RH, Score=170, Expect=2e-44]} {Mouse: ENSMUSG00000029701, Rbm28, RNA binding motif protein 28, [RH, Score=174, Expect=1e-45]} {Dmel: FBgn0260456, CG4806, [RH, Score=113, Expect=7e-26]} {Celegans: WBGene00011043, rbm-28, RNA Binding Motif protein homolog, [RH, Score=135, Expect=3e-33]} {Smed: dd_Smed_v6_3502_0_1, dd_Smed_v6_3502_0_1, [RH, Score=111, Expect=1e-28]} {RNA1509_7413} {RNA1310_20132} {RNA815_19622}
4. MligTC455_28941 56 1.16 Mlig455_024411

Neo: -

Age: Up-Down-Up

 0.97 - - - 0.970 - - Mlig455_024411 {REF} {Length: 6968} {RNA1509_14315} {RNA1310_1783} {RNA815_29572}
5. MligTC455_17211 51 1.07 Mlig455_021314

Neo: Int S/G2/M

Age: Up-Down-Down

 0.957 - - - - 0.957 - Mlig455_021314 {REF} {Length: 1355} {NoTransDecoderORF} {RNA1310_68284.1} {RNA815_50033}
6. MligTC455_14344 18 0.37 Mlig455_032388

Neo: -

Age: -

 0.956 - - - 0.956 - - Mlig455_032388 {REF} {Length: 1352} {Pfam: Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=18.9]} {RNA1509_41164} {RNA1310_43056.1} {RNA815_34568.1}
7. MligTC455_30412 16 0.33 Mlig455_069971

Neo: Irradiation

Age: Up-Down-Down

Regeneration-upregulated R6: 7.559

Regeneration-enriched R6: 7.559

 0.956 - - - - 0.956 - Mlig455_069971 {REF} {Length: 2921} {RNA1509_48089} {RNA1310_11669.1} {RNA815_40639}
8. MligTC455_18620 18 0.38 Mlig455_034822

Neo: -

Age: -

 NANOS1 0.955 - - - - 0.955 - Mlig455_034822 {REF} {Length: 991} {Pfam: Nanos RNA binding domain [PF05741.15, score=83.1]} {Human: ENSG00000188613, NANOS1, nanos C2HC-type zinc finger 1, [RH, Score=79.0, Expect=2e-19]} {Mouse: ENSMUSG00000051965, Nanos2, nanos C2HC-type zinc finger 2, [RH, Score=77.8, Expect=2e-18]} {Dmel: FBgn0002962, nos, Nitric oxide synthase, [RH, Score=82.8, Expect=7e-19]} {Smed: dd_Smed_v6_10484_0_1, dd_Smed_v6_10484_0_1, [Score=85.5, Expect=7e-21]} {RNA1310_139788}
9. MligTC455_31606 113 2.36 Mlig455_019067, Mlig455_064336

Neo: Int S/G2/M

Age: Up-Down-Down

 ATR 0.955 - - - 0.955 - -

Mlig455_019067 {REF} {Length: 4939} {Pfam: Phosphatidylinositol 3- and 4-kinase [PF00454.29, score=186.2]; FAT domain [PF02259.25, score=68.0]; FATC domain [PF02260.22, score=42.8]} {Human: ENSG00000175054, ATR, ATR serine/threonine kinase, [RH, Score=638, Expect=0.0]} {Mouse: ENSMUSG00000032409, Atr, ataxia telangiectasia and Rad3 related, [RH, Score=649, Expect=0.0]} {Dmel: FBgn0004367, mei-41, meiotic 41, [RH, Score=476, Expect=4e-140]} {Celegans: WBGene00000226, atl-1, Serine/threonine-protein kinase ATR, [RH, Score=226, Expect=4e-60]} {Smed: dd_Smed_v6_8754_0_1, dd_Smed_v6_8754_0_1, [RH, Score=528, Expect=1e-159]} {RNA1509_16317} {RNA1310_16516}

Mlig455_064336 {REF} {Length: 5998} {Pfam: Phosphatidylinositol 3- and 4-kinase [PF00454.29, score=186.3]; FAT domain [PF02259.25, score=67.2]; FATC domain [PF02260.22, score=42.7]} {Human: ENSG00000175054, ATR, ATR serine/threonine kinase, [Score=589, Expect=1e-176]} {Mouse: ENSMUSG00000032409, Atr, ataxia telangiectasia and Rad3 related, [Score=597, Expect=1e-179]} {Dmel: FBgn0004367, mei-41, meiotic 41, [RH, Score=469, Expect=3e-136]} {Celegans: WBGene00000226, atl-1, Serine/threonine-protein kinase ATR, [RH, Score=223, Expect=3e-58]} {Smed: dd_Smed_v6_8754_0_1, dd_Smed_v6_8754_0_1, [RH, Score=473, Expect=4e-139]} {RNA1509_16317} {RNA1310_16516}
10. MligTC455_36436 134 2.79 Mlig455_002863

Neo: Int S/G2/M

Age: -

Regeneration-enriched BL: 7.358
Regeneration-enriched R6: 6.879

 NTHL1 0.955 - - - 0.955 - - Mlig455_002863 {REF} {Length: 1664} {TRANSSPLICED} {Pfam: HhH-GPD superfamily base excision DNA repair protein [PF00730.27, score=76.0]; Helix-hairpin-helix motif [PF00633.25, score=31.0]} {Human: ENSG00000065057, NTHL1, nth like DNA glycosylase 1, [RH, Score=309, Expect=2e-104]} {Mouse: ENSMUSG00000041429, Nthl1, nth (endonuclease III)-like 1 (E.coli), [RH, Score=317, Expect=1e-107]} {Dmel: FBgn0032907, CG9272, [RH, Score=261, Expect=8e-85]} {Celegans: WBGene00011201, nth-1, Endonuclease III homolog, [RH, Score=256, Expect=6e-84]} {Smed: dd_Smed_v6_9966_0_3, dd_Smed_v6_9966_0_3, [RH, Score=294, Expect=1e-99]} {RNA1509_44555} {RNA1310_25819.1} {RNA815_11002.1}
11. MligTC455_21364 70 1.45 Mlig455_041353

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R4: 3.091/0.03768

 ELAVL4 0.952 - - - - 0.952 - Mlig455_041353 {REF} {Length: 2933} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=206.5]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=40.6]; Occluded RNA-recognition motif [PF16842.7, score=24.8]; RNA binding motif [PF08777.13, score=20.5]; Nup53/35/40-type RNA recognition motif [PF14605.8, score=18.6]} {Human: ENSG00000162374, ELAVL4, ELAV like RNA binding protein 4, [RH, Score=368, Expect=3e-125]; ENSG00000107105, ELAVL2, ELAV like RNA binding protein 2, [RH, Score=363, Expect=6e-123]; ENSG00000196361, ELAVL3, ELAV like RNA binding protein 3, [RH, Score=351, Expect=1e-118]} {Mouse: ENSMUSG00000028546, Elavl4, ELAV like RNA binding protein 4, [RH, Score=365, Expect=1e-124]; ENSMUSG00000008489, Elavl2, ELAV like RNA binding protein 1, [RH, Score=363, Expect=2e-123]; ENSMUSG00000003410, Elavl3, ELAV like RNA binding protein 3, [RH, Score=351, Expect=5e-119]} {Dmel: FBgn0010263, Rbp9, RNA-binding protein 9, [RH, Score=381, Expect=2e-126]} {Celegans: WBGene00001368, exc-7, [Score=238, Expect=1e-73]} {Smed: dd_Smed_v6_8376_0_1, dd_Smed_v6_8376_0_1, [RH, Score=254, Expect=5e-79]} {RNA1509_10693, RNA1509_11995, RNA1509_5287} {RNA1310_61526, RNA1509_10693, RNA1509_11995} {RNA1509_10693, RNA1509_11995, RNA815_4415.1}

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