TomoSeq data search

Data search

Results for MligTC455_07833

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_07833	10	0.21	Mlig455_016522	Neo: - Age: -		Mlig455_016522 {REF} {Length: 343} {NoTransDecoderORF} {RNA1509_53096} {RNA1310_37586}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_07833

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.011	0.591	1.00000	1.00000
RegionR2	0.91	0.591	0.99997	1.00000
RegionR3	-0.34	0.591	0.99995	1.00000
RegionR4	-1.416	0.591	0.99986	1.00000
RegionR5	-1.116	0.591	0.99994	1.00000
RegionR6	-0.854	0.591	0.99996	1.00000
RegionR7	0.879	0.591	0.99999	1.00000
RegionR8	1.927	0.591	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-1.142	0.591	1.00000	1.00000
RegenerationR2	1.291	0.591	0.99997	1.00000
RegenerationR3	1.185	0.591	1.00000	1.00000
RegenerationR4	-0.817	0.591	0.99993	1.00000
RegenerationR5	1.441	0.591	0.99970	1.00000
RegenerationR6	1.617	0.591	0.99962	1.00000
RegenerationBL	-2.467	0.591	0.99994	1.00000
RegenerationTP	-1.414	0.591	0.99995	1.00000

Genes with expression patterns similar to MligTC455_07833

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_07833	10	0.21	Mlig455_016522	Neo: - Age: -		1	-	-	-	-	1.000	-	Mlig455_016522 {REF} {Length: 343} {NoTransDecoderORF} {RNA1509_53096} {RNA1310_37586}
2.	MligTC455_38617	213	4.44	Mlig455_035321	Neo: - Age: -	RNF40	0.96	-	-	-	-	0.960	-	Mlig455_035321 {REF} {Length: 5208} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=25.8]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=21.9]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=21.1]; BRE1 E3 ubiquitin ligase [PF08647.13, score=19.6]; zinc-RING finger domain [PF14634.8, score=18.6]} {Human: ENSG00000103549, RNF40, ring finger protein 40, [Score=487, Expect=4e-155]} {Mouse: ENSMUSG00000030816, Rnf40, ring finger protein 40, [RH, Score=493, Expect=1e-157]} {Dmel: FBgn0086694, Bre1, [Score=526, Expect=8e-170]} {Celegans: WBGene00007008, rfp-1, E3 ubiquitin-protein ligase bre-1, [RH, Score=149, Expect=2e-36]} {Smed: dd_Smed_v6_4070_0_1, dd_Smed_v6_4070_0_1, [RH, Score=361, Expect=4e-109]} {RNA1509_10234, RNA1509_18812} {RNA1310_3645, RNA1509_10234, RNA1509_18812} {RNA1509_10234, RNA1509_18812, RNA815_443}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_07833

0.21

Mlig455_016522

Neo: -

Age: -

1.000

Mlig455_016522 {REF} {Length: 343} {NoTransDecoderORF} {RNA1509_53096} {RNA1310_37586}

MligTC455_38617

213

4.44

Mlig455_035321

Neo: -

Age: -

RNF40

0.96

0.960

Mlig455_035321 {REF} {Length: 5208} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=25.8]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=21.9]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=21.1]; BRE1 E3 ubiquitin ligase [PF08647.13, score=19.6]; zinc-RING finger domain [PF14634.8, score=18.6]} {Human: ENSG00000103549, RNF40, ring finger protein 40, [Score=487, Expect=4e-155]} {Mouse: ENSMUSG00000030816, Rnf40, ring finger protein 40, [RH, Score=493, Expect=1e-157]} {Dmel: FBgn0086694, Bre1, [Score=526, Expect=8e-170]} {Celegans: WBGene00007008, rfp-1, E3 ubiquitin-protein ligase bre-1, [RH, Score=149, Expect=2e-36]} {Smed: dd_Smed_v6_4070_0_1, dd_Smed_v6_4070_0_1, [RH, Score=361, Expect=4e-109]} {RNA1509_10234, RNA1509_18812} {RNA1310_3645, RNA1509_10234, RNA1509_18812} {RNA1509_10234, RNA1509_18812, RNA815_443}