TomoSeq data search

Data search

Results for MligTC455_07897

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_07897	1489	31.01	Mlig455_058308, Mlig455_068637, Mlig455_068648	Neo: - Age: Down-Up-Up		Mlig455_058308 {REF} {Length: 1677} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=37.2]; Ankyrin repeat [PF00023.32, score=28.1]; Ankyrin repeats (many copies) [PF13857.8, score=26.4]; Ankyrin repeat [PF13606.8, score=22.5]} {RNA1509_9560} {RNA1310_2701} {RNA815_8510} Mlig455_068637 {REF} {Length: 1667} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=48.2]; Ankyrin repeats (many copies) [PF13857.8, score=34.6]; Ankyrin repeat [PF00023.32, score=33.1]; Ankyrin repeat [PF13606.8, score=32.6]} {RNA1509_9560} {RNA1310_2701} {RNA815_8510} Mlig455_068648 {REF} {Length: 1650} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=48.2]; Ankyrin repeats (many copies) [PF13857.8, score=34.6]; Ankyrin repeat [PF00023.32, score=33.1]; Ankyrin repeat [PF13606.8, score=32.6]} {RNA1509_9560} {RNA1310_2701} {RNA815_8510}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_07897

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.745	5.108	0.39725	1.00000
RegionR2	0.265	5.108	0.50949	0.88738
RegionR3	0.772	5.108	0.01624	0.20716
RegionR4	0.563	5.108	0.14960	0.39925
RegionR5	-0.049	5.108	0.88315	1.00000
RegionR6	0.074	5.108	0.83309	1.00000
RegionR7	-0.467	5.108	0.31833	0.95310
RegionR8	-0.412	5.108	0.47191	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.829	5.108	0.42592	1.00000
RegenerationR2	0.08	5.108	0.82334	0.99583
RegenerationR3	-0.052	5.108	0.88807	1.00000
RegenerationR4	0.126	5.108	0.74830	0.96979
RegenerationR5	0.383	5.108	0.30468	0.73199
RegenerationR6	0.031	5.108	0.93944	1.00000
RegenerationBL	0.561	5.108	0.17436	0.50044
RegenerationTP	0.088	5.108	0.86266	1.00000

Genes with expression patterns similar to MligTC455_07897

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_07897	1489	31.01	Mlig455_058308, Mlig455_068637, Mlig455_068648	Neo: - Age: Down-Up-Up		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_058308 {REF} {Length: 1677} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=37.2]; Ankyrin repeat [PF00023.32, score=28.1]; Ankyrin repeats (many copies) [PF13857.8, score=26.4]; Ankyrin repeat [PF13606.8, score=22.5]} {RNA1509_9560} {RNA1310_2701} {RNA815_8510} Mlig455_068637 {REF} {Length: 1667} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=48.2]; Ankyrin repeats (many copies) [PF13857.8, score=34.6]; Ankyrin repeat [PF00023.32, score=33.1]; Ankyrin repeat [PF13606.8, score=32.6]} {RNA1509_9560} {RNA1310_2701} {RNA815_8510} Mlig455_068648 {REF} {Length: 1650} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=48.2]; Ankyrin repeats (many copies) [PF13857.8, score=34.6]; Ankyrin repeat [PF00023.32, score=33.1]; Ankyrin repeat [PF13606.8, score=32.6]} {RNA1509_9560} {RNA1310_2701} {RNA815_8510}
2.	MligTC455_28309	78	1.63	Mlig455_021915	Neo: - Age: Up-Down-Up	FAT3	0.954	-	-	-	-	-	0.954	Mlig455_021915 {REF} {Length: 12300} {Pfam: Cadherin domain [PF00028.19, score=270.9]; Cadherin-like [PF16184.7, score=24.6]} {Human: ENSG00000165323, FAT3, FAT atypical cadherin 3, [Score=241, Expect=2e-65]; ENSG00000282908, FAT3, FAT atypical cadherin 3, [Score=241, Expect=2e-65]; ENSG00000083857, FAT1, FAT atypical cadherin 1, [Score=238, Expect=2e-64]} {Mouse: ENSMUSG00000070047, Fat1, FAT atypical cadherin 1, [Score=246, Expect=3e-67]; ENSMUSG00000074505, Fat3, FAT atypical cadherin 3, [Score=243, Expect=2e-66]} {Dmel: FBgn0261574, kug, kugelei, [Score=245, Expect=3e-67]} {Celegans: WBGene00000396, cdh-4, Cadherin-4, [Score=193, Expect=2e-50]} {Smed: dd_Smed_v6_7638_0_1, dd_Smed_v6_7638_0_1, [Score=196, Expect=2e-51]} {RNA1509_14139} {RNA1310_570.1} {RNA815_134.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_07897

1489

31.01

Mlig455_058308, Mlig455_068637, Mlig455_068648

Neo: -

Age: Down-Up-Up

1.000

MligTC455_28309

1.63

Mlig455_021915

Neo: -

Age: Up-Down-Up

FAT3

0.954

Mlig455_021915 {REF} {Length: 12300} {Pfam: Cadherin domain [PF00028.19, score=270.9]; Cadherin-like [PF16184.7, score=24.6]} {Human: ENSG00000165323, FAT3, FAT atypical cadherin 3, [Score=241, Expect=2e-65]; ENSG00000282908, FAT3, FAT atypical cadherin 3, [Score=241, Expect=2e-65]; ENSG00000083857, FAT1, FAT atypical cadherin 1, [Score=238, Expect=2e-64]} {Mouse: ENSMUSG00000070047, Fat1, FAT atypical cadherin 1, [Score=246, Expect=3e-67]; ENSMUSG00000074505, Fat3, FAT atypical cadherin 3, [Score=243, Expect=2e-66]} {Dmel: FBgn0261574, kug, kugelei, [Score=245, Expect=3e-67]} {Celegans: WBGene00000396, cdh-4, Cadherin-4, [Score=193, Expect=2e-50]} {Smed: dd_Smed_v6_7638_0_1, dd_Smed_v6_7638_0_1, [Score=196, Expect=2e-51]} {RNA1509_14139} {RNA1310_570.1} {RNA815_134.1}