Data search
Results for MligTC455_08046
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_08046 | 47 | 0.98 | Mlig455_065729 | Neo: - Age: - |
Mlig455_065729 {REF} {Length: 443} {NoTransDecoderORF} {RNA1509_47300} {RNA1310_25782} {RNA815_10385} |
Cumulative graph for MligTC455_08046
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.986 | 1.307 | 1.00000 | 1.00000 | |
| RegionR2 | 1.236 | 1.307 | 1.00000 | 1.00000 | |
| RegionR3 | 0.136 | 1.307 | 1.00000 | 1.00000 | |
| RegionR4 | -1.225 | 1.307 | 0.99988 | 1.00000 | |
| RegionR5 | -0.344 | 1.307 | 0.99994 | 1.00000 | |
| RegionR6 | 0.123 | 1.307 | 0.99999 | 1.00000 | |
| RegionR7 | 0.485 | 1.307 | 0.99997 | 1.00000 | |
| RegionR8 | 0.574 | 1.307 | 0.99997 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.157 | 1.307 | 1.00000 | 1.00000 | |
| RegenerationR2 | 5.343 | 1.307 | 0.00014 | 0.01459 | |
| RegenerationR3 | 5.276 | 1.307 | 0.00676 | 0.15000 | |
| RegenerationR4 | 4.586 | 1.307 | 0.00676 | 0.11910 | |
| RegenerationR5 | 5.205 | 1.307 | 0.00084 | 0.04824 | |
| RegenerationR6 | 4.989 | 1.307 | 0.01032 | 0.12541 | |
| RegenerationBL | 3.755 | 1.307 | 0.09451 | 0.36117 | |
| RegenerationTP | 5.188 | 1.307 | 0.03813 | 0.32568 |
Genes with expression patterns similar to MligTC455_08046
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_08046 | 47 | 0.98 | Mlig455_065729 | Neo: - Age: - |
3 | - | - | - | 1.000 | 1.000 | 1.000 | Mlig455_065729 {REF} {Length: 443} {NoTransDecoderORF} {RNA1509_47300} {RNA1310_25782} {RNA815_10385} | |
| 2. | MligTC455_26266 | 86 | 1.78 | Mlig455_045377 | Neo: - Age: - Region-enriched R4: 4.358/0.01873 |
CDR1 | 1.769 | - | - | - | - | 0.818 | 0.951 | Mlig455_045377 {REF} {Length: 1870} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=44.3]} {Human: ENSG00000184258, CDR1, cerebellar degeneration related protein 1, [Score=47.0, Expect=1e-05]} {RNA1509_20888} {RNA1310_5450.1} {RNA815_13104.1} |
| 3. | MligTC455_14466 | 57 | 1.19 | Mlig455_049619 | Neo: - Age: - |
1.723 | - | - | - | - | 0.756 | 0.967 | Mlig455_049619 {REF} {Length: 711} | |
| 4. | MligTC455_15438 | 33 | 0.68 | Mlig455_070969 | Neo: - Age: - |
0.97 | - | - | - | - | - | 0.970 | Mlig455_070969 {REF} {Length: 582} {RNA815_28270} | |
| 5. | MligTC455_22436 | 36 | 0.75 | Mlig455_051770 | Neo: Irradiation Age: Up-Down-Up |
0.963 | - | - | - | - | - | 0.963 | Mlig455_051770 {REF} {Length: 3154} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=57.5]} {RNA1509_14174} {RNA1310_11133} {RNA815_3873.1} | |
| 6. | MligTC455_32735 | 11 | 0.23 | Mlig455_070212 | Neo: - Age: logFC(26M/2M)=-1.782 Regeneration-enriched R4: 8.375 |
0.96 | - | - | - | - | - | 0.960 | Mlig455_070212 {REF} {Length: 2089} {Pfam: RNase H [PF00075.26, score=37.3]; Reverse transcriptase-like [PF13456.8, score=21.1]; zinc-binding in reverse transcriptase [PF13966.8, score=19.5]} {RNA1509_53138} {RNA1310_21300, RNA1509_53138} {RNA1509_53138, RNA815_24593.2} | |
| 7. | MligTC455_35669 | 113 | 2.35 | Mlig455_044042 | Neo: - Age: Down-Down-Up |
MDN1 | 0.959 | - | - | - | - | - | 0.959 | Mlig455_044042 {REF} {Length: 7304} {TRANSSPLICED} {Pfam: AAA domain (dynein-related subfamily) [PF07728.16, score=296.1]; Midasin AAA lid domain [PF17867.3, score=95.6]; ATPase family associated with various cellular activities (AAA) [PF07726.13, score=81.9]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=79.7]; AAA ATPase domain [PF13191.8, score=79.4]; Midasin AAA lid domain [PF17865.3, score=72.6]; P-loop containing dynein motor region [PF12775.9, score=67.5]; AAA domain [PF13401.8, score=66.8]; Sigma-54 interaction domain [PF14532.8, score=56.0]; AAA domain [PF13238.8, score=51.9]; ABC transporter [PF00005.29, score=49.0]; Threonylcarbamoyl adenosine biosynthesis protein TsaE [PF02367.19, score=45.5]; AAA domain [PF13173.8, score=41.4]; AAA domain [PF13604.8, score=39.9]; RNA helicase [PF00910.24, score=39.6]; Sigma-54 interaction domain [PF00158.28, score=38.2]; MoxR domain in the MoxR-vWA-beta-propeller ternary systems [PF20030.1, score=37.0]; Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=36.2]; Rad17 P-loop domain [PF03215.17, score=34.9]; Dynein heavy chain region D6 P-loop domain [PF03028.17, score=34.1]; RsgA GTPase [PF03193.18, score=33.2]; Protein of unknown function (DUF815) [PF05673.15, score=33.0]; NACHT domain [PF05729.14, score=33.0]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=30.0]; AAA domain [PF13671.8, score=30.0]; AAA domain [PF13521.8, score=29.8]; Ethanolamine utilisation - propanediol utilisation [PF10662.11, score=29.7]; ATPase domain predominantly from Archaea [PF01637.20, score=29.2]; P-loop containing region of AAA domain [PF13555.8, score=28.2]; Magnesium chelatase, subunit ChlI [PF01078.23, score=27.1]; 50S ribosome-binding GTPase [PF01926.25, score=25.4]; AAA domain (Cdc48 subfamily) [PF07724.16, score=25.4]; Zeta toxin [PF06414.14, score=24.2]; Deoxynucleoside kinase [PF01712.21, score=24.1]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=22.5]; Chloramphenicol phosphotransferase-like protein [PF07931.14, score=22.1]; AAA domain [PF13476.8, score=22.0]; Viral (Superfamily 1) RNA helicase [PF01443.20, score=21.3]; Conserved hypothetical ATP binding protein [PF03029.19, score=21.3]; Bacterial TniB protein [PF05621.13, score=20.6]; AAA domain [PF13481.8, score=20.3]; mRNA cleavage and polyadenylation factor CLP1 P-loop [PF16575.7, score=19.1]} {Human: ENSG00000112159, MDN1, midasin AAA ATPase 1, [Score=1132, Expect=0.0]} {Mouse: ENSMUSG00000058006, Mdn1, midasin AAA ATPase 1, [Score=1141, Expect=0.0]} {Dmel: FBgn0033661, CG13185, [Score=981, Expect=0.0]} {Celegans: WBGene00018898, F55F10.1, Midasin, [Score=784, Expect=0.0]} {Smed: dd_Smed_v6_12419_0_1, dd_Smed_v6_12419_0_1, [Score=551, Expect=5e-164]} {RNA1509_58959} {RNA1310_572.1} {RNA815_18229} |
| 8. | MligTC455_36458 | 468 | 9.75 | Mlig455_041237 | Neo: - Age: - |
RNF31 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_041237 {REF} {Length: 4269} {TRANSSPLICED} {Pfam: E3 Ubiquitin Ligase RBR C-terminal domain [PF18091.3, score=42.5]} {Human: ENSG00000092098, RNF31, ring finger protein 31, [Score=111, Expect=4e-24]; ENSG00000285152, RNF31, ring finger protein 31, [Score=111, Expect=4e-24]; ENSG00000259529, AL136295.5, novel transcript, [Score=109, Expect=4e-24]; ENSG00000284845, AL136295.10, novel transcript, [Score=109, Expect=4e-24]} {Mouse: ENSMUSG00000047098, Rnf31, ring finger protein 31, [Score=112, Expect=9e-25]} {Dmel: FBgn0085446, CG34417, [Score=82.8, Expect=1e-15]} {RNA1509_19319, RNA1509_20702, RNA1509_24854, RNA1509_32163, RNA1509_33237, RNA1509_36618, RNA1509_39561, RNA1509_41517, RNA1509_53033} {RNA1310_6690, RNA1509_19319, RNA1509_20702, RNA1509_24854, RNA1509_32163, RNA1509_33237, RNA1509_36618, RNA1509_39561, RNA1509_41517, RNA1509_53033} {RNA1509_19319, RNA1509_20702, RNA1509_24854, RNA1509_32163, RNA1509_33237, RNA1509_36618, RNA1509_39561, RNA1509_41517, RNA1509_53033, RNA815_6553.1} |
| 9. | MligTC455_36937 | 44 | 0.91 | Mlig455_066629 | Neo: - Age: - |
0.959 | - | - | - | - | 0.959 | - | Mlig455_066629 {REF} {Length: 1530} {NoTransDecoderORF} {RNA1509_44223} {RNA1310_54802} {RNA815_64986} | |
| 10. | MligTC455_41673 | 26 | 0.54 | Mlig455_035834 | Neo: - Age: - |
0.958 | - | - | - | - | - | 0.958 | Mlig455_035834 {REF} {Length: 1561} {NoTransDecoderORF} {RNA1310_64046} {RNA815_37581} | |
| 11. | MligTC455_01365 | 11 | 0.23 | Mlig455_028201 | Neo: - Age: - |
0.956 | - | - | - | - | - | 0.956 | Mlig455_028201 {REF} {Length: 220} {NoTransDecoderORF} | |
| 12. | MligTC455_36906 | 32 | 0.66 | Mlig455_005733 | Neo: - Age: - |
0.956 | - | - | - | - | - | 0.956 | Mlig455_005733 {REF} {Length: 1217} {NoTransDecoderORF} {RNA1509_40552} {RNA1310_31059} {RNA815_21848} | |
| 13. | MligTC455_47156 | 156 | 3.25 | Mlig455_067889 | Neo: - Age: Up-Down-Down |
0.95 | - | - | - | - | 0.950 | - | Mlig455_067889 {REF} {Length: 2576} {TRANSSPLICED} {RNA1509_35508} {RNA1310_44071.1} {RNA815_31229} |
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