M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_08115

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_08115 30 0.63 Mlig455_049533

Neo: -

Age: -

 Mlig455_049533 {REF} {Length: 1586} {RNA1509_1754} {RNA1310_38808} {RNA815_23232}

Cumulative graph for MligTC455_08115

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.432 0.946 0.99987 1.00000
RegionR2 0.333 0.946 1.00000 1.00000
RegionR3 0.309 0.946 0.99974 1.00000
RegionR4 -0.619 0.946 1.00000 1.00000
RegionR5 -0.011 0.946 0.99982 1.00000
RegionR6 -0.152 0.946 1.00000 1.00000
RegionR7 0.101 0.946 1.00000 1.00000
RegionR8 0.472 0.946 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.604 0.946 1.00000 1.00000
RegenerationR2 2.602 0.946 0.23423 0.68177
RegenerationR3 1.249 0.946 0.53197 0.87322
RegenerationR4 3.381 0.946 0.15598 0.58714
RegenerationR5 2.785 0.946 0.16510 0.59076
RegenerationR6 3.601 0.946 0.19046 0.52840
RegenerationBL 5.114 0.946 0.10271 0.37790
RegenerationTP -0.585 0.946 0.99989 1.00000


Genes with expression patterns similar to MligTC455_08115

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_08115 30 0.63 Mlig455_049533

Neo: -

Age: -

 2 - - - - 1.000 1.000 Mlig455_049533 {REF} {Length: 1586} {RNA1509_1754} {RNA1310_38808} {RNA815_23232}
2. MligTC455_55037 10 0.2 Mlig455_048903

Neo: -

Age: -

 1.785 - - - - 0.834 0.951 Mlig455_048903 {REF} {Length: 570} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_41553} {RNA1310_20523} {RNA815_34173}
3. MligTC455_00424 22 0.45 Mlig455_045233

Neo: -

Age: -

 1.705 - - - - 0.714 0.991 Mlig455_045233 {REF} {Length: 575} {RNA1310_21871} {RNA815_32300}
4. MligTC455_30471 26 0.53 Mlig455_058326

Neo: -

Age: -

 0.984 - - - - - 0.984 Mlig455_058326 {REF} {Length: 3186} {NoTransDecoderORF} {RNA1509_28752} {RNA1310_33750} {RNA815_25009.1}
5. MligTC455_36366 31 0.65 Mlig455_044914, Mlig455_055521, Mlig455_055535

Neo: -

Age: -

 0.979 - - - - 0.979 -

Mlig455_044914 {REF} {Length: 467} {RNA1509_45173} {RNA1310_56841} {RNA815_31799}

Mlig455_055521 {REF} {Length: 1591} {RNA1509_46145} {RNA1310_42249} {RNA815_5444.1}

Mlig455_055535 {REF} {Length: 963} {RNA1509_45173} {RNA1310_6693.2, RNA1509_45173} {RNA1509_45173, RNA815_38657}
6. MligTC455_06728 96 2.01 Mlig455_022532

Neo: Int S/G2/M

Age: -

 ASPSCR1 0.973 - - - - 0.973 - Mlig455_022532 {REF} {Length: 5507} {Pfam: UBX domain [PF00789.22, score=26.2]} {Human: ENSG00000169696, ASPSCR1, ASPSCR1, UBX domain containing tether for SLC2A4, [RH, Score=93.6, Expect=9e-20]} {Mouse: ENSMUSG00000025142, Aspscr1, alveolar soft part sarcoma chromosome region, candidate 1 (human), [RH, Score=95.1, Expect=1e-20]} {Dmel: FBgn0064126, CG33722, [RH, Score=84.0, Expect=5e-17]} {Smed: dd_Smed_v6_5172_0_1, dd_Smed_v6_5172_0_1, [RH, Score=108, Expect=3e-25]} {RNA1509_46971} {RNA1310_6275.2} {RNA815_3161}
7. MligTC455_43189 30 0.62 Mlig455_014017

Neo: -

Age: Down-Up-Down

 0.973 - - - - 0.973 - Mlig455_014017 {REF} {Length: 2686} {NoTransDecoderORF} {RNA1509_58094} {RNA1310_13057, RNA1509_58094} {RNA1509_58094, RNA815_51890}
8. MligTC455_53349 48 1 Mlig455_034044, Mlig455_060425

Neo: -

Age: -

Region-enriched R8: 4.743/0.03399

 0.97 - - - - 0.970 -

Mlig455_034044 {REF} {Length: 117} {NoTransDecoderORF} {RNA1310_129264}

Mlig455_060425 {REF} {Length: 180} {NoTransDecoderORF} {RNA1310_129264}
9. MligTC455_14909 13 0.27 Mlig455_002498

Neo: -

Age: -

 0.967 - - - - 0.967 - Mlig455_002498 {REF} {Length: 2555} {NoTransDecoderORF} {RNA1509_58323} {RNA1310_36708} {RNA815_57793}
10. MligTC455_31682 194 4.05 Mlig455_045912, Mlig455_050797, Mlig455_056090, Mlig455_062628, Mlig455_063332, Mlig455_067537

Neo: Irradiation

Age: Up-Up-Down

Region-enriched R5: 3.996/0.00015

 PIF1 0.966 - - - - - 0.966

Mlig455_045912 {REF} {Length: 6495} {Pfam: PIF1-like helicase [PF05970.16, score=268.1]; Helitron helicase-like domain at N-terminus [PF14214.8, score=199.9]; AAA domain [PF13604.8, score=43.0]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=51.2, Expect=1e-05]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=50.8, Expect=1e-05]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=58.9, Expect=3e-08]} {Celegans: WBGene00018020, F33H12.6, [Score=659, Expect=0.0]} {Smed: dd_Smed_v6_22430_0_1, dd_Smed_v6_22430_0_1, [Score=83.2, Expect=7e-19]} {RNA1509_7410} {RNA1310_1350} {RNA815_358.1}

Mlig455_050797 {REF} {Length: 6801} {Pfam: PIF1-like helicase [PF05970.16, score=330.1]; Helitron helicase-like domain at N-terminus [PF14214.8, score=199.6]; AAA domain [PF13604.8, score=42.9]; Helicase [PF02689.16, score=23.5]; UvrD-like helicase C-terminal domain [PF13538.8, score=19.6]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=89.0, Expect=4e-17]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=90.5, Expect=8e-18]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=83.2, Expect=1e-15]} {Celegans: WBGene00019136, F59H6.5, [RH, Score=801, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=105, Expect=8e-23]} {RNA1509_7410} {RNA1310_3337} {RNA815_358.1}

Mlig455_056090 {REF} {Length: 8134} {Pfam: PIF1-like helicase [PF05970.16, score=331.2]; Helitron helicase-like domain at N-terminus [PF14214.8, score=199.9]; AAA domain [PF13604.8, score=46.0]; Helicase [PF02689.16, score=24.0]; UvrD-like helicase C-terminal domain [PF13538.8, score=19.9]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=84.7, Expect=6e-16]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=86.3, Expect=1e-16]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=80.9, Expect=4e-15]} {Celegans: WBGene00018020, F33H12.6, [Score=696, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=108, Expect=4e-24]} {RNA1509_7410} {RNA1310_616.1} {RNA815_358.1}

Mlig455_062628 {REF} {Length: 5915} {Pfam: PIF1-like helicase [PF05970.16, score=285.3]; Helitron helicase-like domain at N-terminus [PF14214.8, score=191.6]; Helicase [PF02689.16, score=24.2]; AAA domain [PF13604.8, score=22.2]; UvrD-like helicase C-terminal domain [PF13538.8, score=20.2]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=82.4, Expect=2e-15]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=86.3, Expect=1e-16]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=77.4, Expect=4e-14]} {Celegans: WBGene00018020, F33H12.6, [Score=596, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=90.1, Expect=3e-18]} {RNA1509_7410} {RNA1310_3337} {RNA815_358.1}

Mlig455_063332 {REF} {Length: 6737} {Pfam: PIF1-like helicase [PF05970.16, score=332.8]; Helitron helicase-like domain at N-terminus [PF14214.8, score=199.7]; AAA domain [PF13604.8, score=43.4]; Helicase [PF02689.16, score=23.6]; UvrD-like helicase C-terminal domain [PF13538.8, score=19.6]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=89.7, Expect=2e-17]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=91.3, Expect=4e-18]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=87.0, Expect=7e-17]} {Celegans: WBGene00019136, F59H6.5, [RH, Score=808, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=107, Expect=2e-23]} {RNA1509_7410} {RNA1310_3337} {RNA815_358.1}

Mlig455_067537 {REF} {Length: 7121} {Pfam: PIF1-like helicase [PF05970.16, score=334.1]; Helitron helicase-like domain at N-terminus [PF14214.8, score=198.4]; AAA domain [PF13604.8, score=42.2]; Helicase [PF02689.16, score=23.7]; UvrD-like helicase C-terminal domain [PF13538.8, score=19.7]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=87.0, Expect=1e-16]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=89.4, Expect=2e-17]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=61.2, Expect=6e-09]} {Celegans: WBGene00018020, F33H12.6, [Score=735, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=105, Expect=8e-23]} {RNA1509_7410} {RNA1310_616.1} {RNA815_358.1}
11. MligTC455_23662 285 5.95 Mlig455_025104

Neo: Irradiation

Age: -

Region-specific R4: 5.419

Region-enriched R4: 3.777/0.00001

 0.965 - - - - 0.965 - Mlig455_025104 {REF} {Length: 4467} {RNA1509_23438} {RNA1310_48896, RNA1509_23438}
12. MligTC455_46535 153 3.19 Mlig455_045934

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.762

 SLC17A6 0.964 - - - - 0.964 - Mlig455_045934 {REF} {Length: 2260} {Pfam: Major Facilitator Superfamily [PF07690.18, score=162.7]} {Human: ENSG00000091664, SLC17A6, solute carrier family 17 member 6, [Score=414, Expect=1e-138]; ENSG00000104888, SLC17A7, solute carrier family 17 member 7, [Score=401, Expect=1e-133]; ENSG00000179520, SLC17A8, solute carrier family 17 member 8, [Score=396, Expect=2e-131]} {Mouse: ENSMUSG00000030500, Slc17a6, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6, [Score=414, Expect=1e-138]; ENSMUSG00000070570, Slc17a7, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7, [Score=402, Expect=2e-134]} {Dmel: FBgn0031424, VGlut, Vesicular glutamate transporter, [Score=393, Expect=5e-130]} {Celegans: WBGene00001135, eat-4, Probable vesicular glutamate transporter eat-4, [Score=358, Expect=2e-117]} {Smed: dd_Smed_v6_10192_0_1, dd_Smed_v6_10192_0_1, [Score=439, Expect=2e-148]} {RNA1509_48730} {RNA1310_31012} {RNA815_15101}
13. MligTC455_15355 10 0.22 Mlig455_032648

Neo: -

Age: -

 FURIN 0.963 - - - - 0.963 - Mlig455_032648 {REF} {Length: 2589} {Pfam: Subtilase family [PF00082.24, score=155.9]; Proprotein convertase P-domain [PF01483.22, score=73.0]; Peptidase S8 pro-domain [PF16470.7, score=67.3]} {Human: ENSG00000140564, FURIN, furin, paired basic amino acid cleaving enzyme, [RH, Score=550, Expect=0.0]; ENSG00000140479, PCSK6, proprotein convertase subtilisin/kexin type 6, [RH, Score=543, Expect=0.0]} {Mouse: ENSMUSG00000030530, Furin, furin (paired basic amino acid cleaving enzyme), [RH, Score=550, Expect=0.0]; ENSMUSG00000030513, Pcsk6, proprotein convertase subtilisin/kexin type 6, [RH, Score=542, Expect=1e-180]; ENSMUSG00000024713, Pcsk5, proprotein convertase subtilisin/kexin type 5, [RH, Score=526, Expect=4e-175]} {Dmel: FBgn0004509, Fur1, Furin 1, [RH, Score=554, Expect=0.0]} {Celegans: WBGene00002232, kpc-1, Furin-like protease kpc-1, [RH, Score=558, Expect=0.0]} {Smed: dd_Smed_v6_10832_0_1, dd_Smed_v6_10832_0_1, [RH, Score=621, Expect=0.0]} {RNA1509_27501} {RNA1310_7852, RNA1509_27501} {RNA1509_27501, RNA815_2403.1}
14. MligTC455_31679 20 0.43 Mlig455_022701

Neo: -

Age: -

 PIF1 0.961 - - - - - 0.961 Mlig455_022701 {REF} {Length: 5983} {Pfam: PIF1-like helicase [PF05970.16, score=331.9]; Helitron helicase-like domain at N-terminus [PF14214.8, score=200.2]; AAA domain [PF13604.8, score=45.4]; Helicase [PF02689.16, score=23.6]; UvrD-like helicase C-terminal domain [PF13538.8, score=19.6]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=90.1, Expect=2e-17]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=91.3, Expect=4e-18]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=89.0, Expect=2e-17]} {Celegans: WBGene00019136, F59H6.5, [RH, Score=800, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=106, Expect=3e-23]} {RNA1509_7410} {RNA1310_1350} {RNA815_358.1}
15. MligTC455_04832 51 1.06 Mlig455_062392

Neo: -

Age: -

Regeneration-upregulated R2: 6.311

Regeneration-enriched R2: 6.311

 0.959 - - - - 0.959 - Mlig455_062392 {REF} {Length: 699}
16. MligTC455_19465 216 4.5 Mlig455_011567

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.898

Region-enriched R2: 2.709/0.02014

 LRRC69 0.959 - - - - 0.959 - Mlig455_011567 {REF} {Length: 2449} {TRANSSPLICED} {Pfam: Leucine rich repeat [PF13855.8, score=92.7]; Leucine Rich repeats (2 copies) [PF12799.9, score=80.1]; Leucine Rich repeat [PF13516.8, score=33.3]; Leucine Rich Repeat [PF00560.35, score=27.4]} {Human: ENSG00000214954, LRRC69, leucine rich repeat containing 69, [RH, Score=198, Expect=7e-60]} {Mouse: ENSMUSG00000023151, Lrrc69, leucine rich repeat containing 69, [RH, Score=218, Expect=1e-67]} {Dmel: FBgn0033984, Lap1, [Score=105, Expect=3e-24]} {Celegans: WBGene00002632, let-413, [Score=112, Expect=8e-27]} {Smed: dd_Smed_v6_14722_0_1, dd_Smed_v6_14722_0_1, [RH, Score=184, Expect=5e-56]} {RNA1509_41102} {RNA1310_3215.1} {RNA815_13052}
17. MligTC455_51783 602 12.55 Mlig455_010395

Neo: -

Age: Down-Up-Down

 0.959 - - - - 0.959 - Mlig455_010395 {REF} {Length: 1701} {TRANSSPLICED} {RNA1509_52629, RNA1509_55785, RNA1509_8501} {RNA1310_53341, RNA1509_52629, RNA1509_55785, RNA1509_8501} {RNA1509_52629, RNA1509_55785, RNA1509_8501, RNA815_24976}
18. MligTC455_53383 64 1.33 Mlig455_007926

Neo: -

Age: logFC(26M/2M)=0.427

 0.959 - - - - 0.959 - Mlig455_007926 {REF} {Length: 1171} {TRANSSPLICED} {RNA1509_44796} {RNA1310_37940} {RNA815_18215}
19. MligTC455_03914 29 0.6 Mlig455_013472

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_013472 {REF} {Length: 296} {NoTransDecoderORF} {RNA1509_29577} {RNA1310_49650} {RNA815_21383}
20. MligTC455_16604 4 0.08 Mlig455_026893

Neo: -

Age: -

 0.958 - - - - - 0.958 Mlig455_026893 {REF} {Length: 569} {NoTransDecoderORF} {RNA1310_120400}
21. MligTC455_37736 54 1.12 Mlig455_058806, Mlig455_058858

Neo: -

Age: -

 0.956 - - - - 0.956 -

Mlig455_058806 {REF} {Length: 130} {NoTransDecoderORF} {RNA1310_148836}

Mlig455_058858 {REF} {Length: 1512} {NoTransDecoderORF} {RNA1509_51141} {RNA1310_148836} {RNA815_14120.1}
22. MligTC455_42512 250 5.21 Mlig455_062471

Neo: -

Age: -

 0.955 - - - - 0.955 - Mlig455_062471 {REF} {Length: 1338} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF3421) [PF11901.10, score=100.2]} {Dmel: FBgn0033787, CG13321, [Score=77.8, Expect=4e-17]} {Smed: dd_Smed_v6_30758_0_1, dd_Smed_v6_30758_0_1, [Score=106, Expect=3e-29]} {RNA1509_24143, RNA1509_27456} {RNA1310_20408, RNA1509_24143, RNA1509_27456} {RNA1509_24143, RNA1509_27456, RNA815_10936.1}
23. MligTC455_08211 5 0.09 Mlig455_038301

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_038301 {REF} {Length: 512} {NoTransDecoderORF}
24. MligTC455_17370 13 0.27 Mlig455_014235

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_014235 {REF} {Length: 465} {NoTransDecoderORF} {RNA1310_77462}
25. MligTC455_27519 136 2.83 Mlig455_006410

Neo: -

Age: Down-Down-Up

 CRB2 0.953 - - - - 0.953 - Mlig455_006410 {REF} {Length: 4122} {Pfam: EGF-like domain [PF00008.29, score=130.3]; Human growth factor-like EGF [PF12661.9, score=68.3]; Laminin G domain [PF02210.26, score=25.2]} {Human: ENSG00000148204, CRB2, crumbs 2, cell polarity complex component, [Score=326, Expect=6e-93]} {Mouse: ENSMUSG00000035403, Crb2, crumbs family member 2, [Score=323, Expect=4e-92]} {Dmel: FBgn0259685, crb, crumbs, [Score=377, Expect=7e-109]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=212, Expect=2e-55]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=186, Expect=1e-47]} {RNA1509_50019} {RNA1310_5116.1} {RNA815_693.1}
26. MligTC455_47510 253 5.28 Mlig455_047257, Mlig455_047311

Neo: -

Age: -

Region-enriched R6: 2.630/0.01711

 HTR1A 0.953 - - - - 0.953 -

Mlig455_047257 {REF} {Length: 4105} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=230.7]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=27.2]} {Human: ENSG00000178394, HTR1A, 5-hydroxytryptamine receptor 1A, [Score=285, Expect=4e-92]} {Mouse: ENSMUSG00000021721, Htr1a, 5-hydroxytryptamine (serotonin) receptor 1A, [RH, Score=290, Expect=6e-94]} {Dmel: FBgn0053517, Dop2R, Dopamine 2-like receptor, [Score=228, Expect=5e-67]} {Celegans: WBGene00004779, ser-4, SERotonin/octopamine receptor family; Serotonin receptor, [Score=256, Expect=1e-80]} {Smed: dd_Smed_v6_33009_0_1, dd_Smed_v6_33009_0_1, [Score=356, Expect=4e-119]} {RNA1310_23878} {RNA815_22159}

Mlig455_047311 {REF} {Length: 2473} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=230.9]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=25.9]} {Human: ENSG00000178394, HTR1A, 5-hydroxytryptamine receptor 1A, [Score=287, Expect=1e-92]} {Mouse: ENSMUSG00000021721, Htr1a, 5-hydroxytryptamine (serotonin) receptor 1A, [RH, Score=289, Expect=1e-93]} {Dmel: FBgn0004573, 5-HT7, 5-hydroxytryptamine (serotonin) receptor 7, [Score=221, Expect=5e-66]} {Celegans: WBGene00004779, ser-4, SERotonin/octopamine receptor family; Serotonin receptor, [Score=257, Expect=3e-81]} {Smed: dd_Smed_v6_11236_0_1, dd_Smed_v6_11236_0_1, [RH, Score=276, Expect=4e-88]} {RNA1310_23878} {RNA815_22159}
27. MligTC455_02837 29 0.61 Mlig455_004700

Neo: -

Age: -

Region-enriched R6: 6.687/0.01418

 0.951 - - - - 0.951 - Mlig455_004700 {REF} {Length: 1630} {RNA1509_44223} {RNA1310_194.1} {RNA815_27158}
28. MligTC455_11055 13 0.27 Mlig455_021220

Neo: -

Age: -

 ZFP36L1 0.951 - - - - - 0.951 Mlig455_021220 {REF} {Length: 2097} {TRANSSPLICED} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=58.8]; Zinc finger domain [PF18345.3, score=35.7]; RNA-binding, Nab2-type zinc finger [PF14608.8, score=29.0]; CCCH-type zinc finger [PF18044.3, score=28.1]} {Human: ENSG00000185650, ZFP36L1, ZFP36 ring finger protein like 1, [Score=67.8, Expect=2e-14]; ENSG00000152518, ZFP36L2, ZFP36 ring finger protein like 2, [Score=66.2, Expect=9e-14]} {Mouse: ENSMUSG00000059334, Zfp36l3, zinc finger protein 36, C3H type-like 3, [Score=69.7, Expect=4e-15]; ENSMUSG00000021127, Zfp36l1, zinc finger protein 36, C3H type-like 1, [Score=68.6, Expect=7e-15]} {Dmel: FBgn0011837, Tis11, Tis11 zinc finger protein, [Score=69.3, Expect=4e-15]} {Celegans: WBGene00007961, C35D6.4, [RH, Score=66.6, Expect=6e-15]} {RNA1310_91211} {RNA815_52611}
29. MligTC455_13437 13 0.28 Mlig455_035490

Neo: -

Age: Down-Down-Up

 0.951 - - - - 0.951 - Mlig455_035490 {REF} {Length: 3700} {RNA1509_2515} {RNA1310_28603.1} {RNA815_3258.1}
30. MligTC455_29748 27 0.55 Mlig455_060742

Neo: -

Age: -

 ANKRD50 0.951 - - - - - 0.951 Mlig455_060742 {REF} {Length: 4731} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=77.5]; Ankyrin repeats (many copies) [PF13637.8, score=51.9]; Ankyrin repeats (many copies) [PF13857.8, score=47.9]; Ankyrin repeat [PF13606.8, score=46.7]; Ankyrin repeat [PF00023.32, score=41.3]; Mab-21 protein [PF03281.16, score=39.3]} {Human: ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=84.0, Expect=1e-15]} {Mouse: ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=85.5, Expect=3e-16]} {Dmel: FBgn0039590, CG10011, [Score=72.0, Expect=3e-12]} {Celegans: WBGene00012124, T28D6.4, [Score=60.5, Expect=5e-09]} {Smed: dd_Smed_v6_6779_0_1, dd_Smed_v6_6779_0_1, [Score=89.4, Expect=7e-18]} {RNA1509_27730, RNA1509_59832} {RNA1310_4721, RNA1509_59832} {RNA1509_59832, RNA815_2426.1}
31. MligTC455_39208 76 1.57 Mlig455_051743, Mlig455_061440

Neo: Int S/G2/M

Age: -

Region-enriched R5: 2.935/0.00838

 UBN1 0.951 - - - - 0.951 -

Mlig455_051743 {REF} {Length: 4440} {TRANSSPLICED} {Pfam: Ubinuclein conserved middle domain [PF14075.8, score=101.1]; HPC2 and ubinuclein domain [PF08729.12, score=48.3]} {Human: ENSG00000118900, UBN1, ubinuclein 1, [RH, Score=75.5, Expect=3e-13]} {Mouse: ENSMUSG00000039473, Ubn1, ubinuclein 1, [RH, Score=72.8, Expect=1e-12]} {Dmel: FBgn0005596, yem, yemanuclein, [Score=68.9, Expect=1e-11]} {Smed: dd_Smed_v6_10210_0_1, dd_Smed_v6_10210_0_1, [RH, Score=63.5, Expect=3e-10]} {RNA1509_10644} {RNA1310_1714.1} {RNA815_16489}

Mlig455_061440 {REF} {Length: 812} {Pfam: Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=35.5]; PHD-finger [PF00628.31, score=19.6]}
32. MligTC455_46144 230 4.8 Mlig455_037529

Neo: -

Age: logFC(26M/2M)=-0.234

 PDS5A 0.951 - - - - 0.951 - Mlig455_037529 {REF} {Length: 7763} {TRANSSPLICED} {Pfam: FANCI solenoid 2 [PF14676.8, score=19.2]} {Human: ENSG00000121892, PDS5A, PDS5 cohesin associated factor A, [RH, Score=422, Expect=3e-123]; ENSG00000083642, PDS5B, PDS5 cohesin associated factor B, [RH, Score=421, Expect=2e-122]} {Mouse: ENSMUSG00000029202, Pds5a, PDS5 cohesin associated factor A, [RH, Score=426, Expect=1e-124]} {Dmel: FBgn0260012, pds5, precocious dissociation of sisters 5, [Score=339, Expect=7e-96]} {Smed: dd_Smed_v6_6701_1_3, dd_Smed_v6_6701_1_3, [Score=251, Expect=6e-67]} {RNA1509_7371} {RNA1310_1423.1} {RNA815_501}
33. MligTC455_12092 26 0.53 Mlig455_037145, Mlig455_038506

Neo: -

Age: -

Region-enriched R2: 8.236/0.00174

 0.95 - - - - 0.950 -

Mlig455_037145 {REF} {Length: 1565} {RNA1310_83153} {RNA815_43915}

Mlig455_038506 {REF} {Length: 1558} {RNA1310_83153} {RNA815_43915}
34. MligTC455_53789 8 0.17 Mlig455_046935

Neo: -

Age: -

 MPDZ 0.95 - - - - 0.950 - Mlig455_046935 {REF} {Length: 6838} {Pfam: PDZ domain [PF00595.26, score=249.0]; PDZ domain [PF17820.3, score=147.0]; PDZ domain [PF13180.8, score=88.6]} {Human: ENSG00000107186, MPDZ, multiple PDZ domain crumbs cell polarity complex component, [Score=265, Expect=6e-71]} {Mouse: ENSMUSG00000028402, Mpdz, multiple PDZ domain protein, [Score=260, Expect=1e-69]} {Dmel: FBgn0067864, Patj, [RH, Score=235, Expect=1e-63]} {Celegans: WBGene00003404, mpz-1, Multiple PDZ domain protein, [Score=163, Expect=5e-40]} {Smed: dd_Smed_v6_6739_0_1, dd_Smed_v6_6739_0_1, [Score=230, Expect=8e-62]} {RNA1509_27260} {RNA1310_504} {RNA815_9118}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA