TomoSeq data search

Data search

Results for MligTC455_08665

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_08665	9	0.18	Mlig455_065399	Neo: - Age: Up-Down-Down	MAP3K19	Mlig455_065399 {REF} {Length: 3285} {Pfam: Protein kinase domain [PF00069.27, score=124.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=96.1]; Ankyrin repeats (3 copies) [PF12796.9, score=79.7]; Ankyrin repeat [PF00023.32, score=50.6]; Ankyrin repeat [PF13606.8, score=45.4]; Ankyrin repeats (many copies) [PF13637.8, score=44.5]; Ankyrin repeats (many copies) [PF13857.8, score=39.0]; ABC1 atypical kinase-like domain [PF03109.18, score=22.6]; Fungal protein kinase [PF17667.3, score=19.8]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=117, Expect=2e-27]; ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [Score=114, Expect=1e-25]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=119, Expect=4e-28]} {Dmel: FBgn0024329, Mekk1, [Score=117, Expect=5e-27]} {Celegans: WBGene00003822, nsy-1, Mitogen-activated protein kinase kinase kinase nsy-1, [Score=92.4, Expect=3e-19]} {Smed: dd_Smed_v6_3286_0_3, dd_Smed_v6_3286_0_3, [Score=102, Expect=8e-23]} {RNA1509_16464} {RNA1310_76258} {RNA815_28833.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_08665

0.18

Mlig455_065399

Neo: -

Age: Up-Down-Down

MAP3K19

Mlig455_065399 {REF} {Length: 3285} {Pfam: Protein kinase domain [PF00069.27, score=124.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=96.1]; Ankyrin repeats (3 copies) [PF12796.9, score=79.7]; Ankyrin repeat [PF00023.32, score=50.6]; Ankyrin repeat [PF13606.8, score=45.4]; Ankyrin repeats (many copies) [PF13637.8, score=44.5]; Ankyrin repeats (many copies) [PF13857.8, score=39.0]; ABC1 atypical kinase-like domain [PF03109.18, score=22.6]; Fungal protein kinase [PF17667.3, score=19.8]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=117, Expect=2e-27]; ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [Score=114, Expect=1e-25]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=119, Expect=4e-28]} {Dmel: FBgn0024329, Mekk1, [Score=117, Expect=5e-27]} {Celegans: WBGene00003822, nsy-1, Mitogen-activated protein kinase kinase kinase nsy-1, [Score=92.4, Expect=3e-19]} {Smed: dd_Smed_v6_3286_0_3, dd_Smed_v6_3286_0_3, [Score=102, Expect=8e-23]} {RNA1509_16464} {RNA1310_76258} {RNA815_28833.1}

Cumulative graph for MligTC455_08665

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_08665

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_08665	9	0.18	Mlig455_065399	Neo: - Age: Up-Down-Down	MAP3K19	2	-	1.000	-	-	-	1.000	Mlig455_065399 {REF} {Length: 3285} {Pfam: Protein kinase domain [PF00069.27, score=124.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=96.1]; Ankyrin repeats (3 copies) [PF12796.9, score=79.7]; Ankyrin repeat [PF00023.32, score=50.6]; Ankyrin repeat [PF13606.8, score=45.4]; Ankyrin repeats (many copies) [PF13637.8, score=44.5]; Ankyrin repeats (many copies) [PF13857.8, score=39.0]; ABC1 atypical kinase-like domain [PF03109.18, score=22.6]; Fungal protein kinase [PF17667.3, score=19.8]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=117, Expect=2e-27]; ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [Score=114, Expect=1e-25]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=119, Expect=4e-28]} {Dmel: FBgn0024329, Mekk1, [Score=117, Expect=5e-27]} {Celegans: WBGene00003822, nsy-1, Mitogen-activated protein kinase kinase kinase nsy-1, [Score=92.4, Expect=3e-19]} {Smed: dd_Smed_v6_3286_0_3, dd_Smed_v6_3286_0_3, [Score=102, Expect=8e-23]} {RNA1509_16464} {RNA1310_76258} {RNA815_28833.1}
2.	MligTC455_31130	23	0.47	Mlig455_029647, Mlig455_052260, Mlig455_054234	Neo: - Age: -	NYNRIN	0.964	-	0.964	-	-	-	-	Mlig455_029647 {REF} {Length: 917} {Pfam: gag-polyprotein putative aspartyl protease [PF13975.8, score=30.6]; Aspartyl protease [PF13650.8, score=27.6]} {RNA1509_30575} {RNA1310_1140.1} {RNA815_993.1} Mlig455_052260 {REF} {Length: 4476} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=124.2]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=118.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=78.6]; Integrase zinc binding domain [PF17921.3, score=67.8]; Integrase core domain [PF00665.28, score=51.2]; gag-polyprotein putative aspartyl protease [PF13975.8, score=30.2]; Aspartyl protease [PF13650.8, score=27.7]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=93.2, Expect=3e-18]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=454, Expect=1e-139]} {RNA1509_29748} {RNA1310_870} {RNA815_993.1} Mlig455_054234 {REF} {Length: 1574} {Pfam: Integrase zinc binding domain [PF17921.3, score=67.3]; Integrase core domain [PF00665.28, score=51.8]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=95.1, Expect=8e-20]} {Smed: dd_Smed_v6_1574_6_72, dd_Smed_v6_1574_6_72, [Score=189, Expect=7e-54]} {RNA1509_29748} {RNA1310_1140.1} {RNA815_993.1}
3.	MligTC455_38012	17	0.35	Mlig455_037323, Mlig455_040296	Neo: - Age: -		0.962	-	0.962	-	-	-	-	Mlig455_037323 {REF} {Length: 405} {NoTransDecoderORF} {RNA1310_81014.1} Mlig455_040296 {REF} {Length: 180} {NoTransDecoderORF} {RNA1310_81014.2}
4.	MligTC455_09445	68	1.41	Mlig455_034437	Neo: - Age: -		0.953	-	-	-	-	-	0.953	Mlig455_034437 {REF} {Length: 1224} {TRANSSPLICED}