M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_08894

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_08894 18 0.37 Mlig455_005112

Neo: -

Age: -

 Mlig455_005112 {REF} {Length: 603} {RNA1310_92971}

Cumulative graph for MligTC455_08894

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.136 0.726 0.99978 1.00000
RegionR2 1.028 0.726 0.99990 1.00000
RegionR3 -0.508 0.726 1.00000 1.00000
RegionR4 -1.257 0.726 0.99979 1.00000
RegionR5 -1.162 0.726 0.99985 1.00000
RegionR6 -0.638 0.726 1.00000 1.00000
RegionR7 0.969 0.726 0.99995 1.00000
RegionR8 1.433 0.726 0.99994 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.343 0.726 0.99994 1.00000
RegenerationR2 2.223 0.726 0.06690 0.42238
RegenerationR3 3.75 0.726 0.21623 0.65271
RegenerationR4 -0.121 0.726 0.99985 1.00000
RegenerationR5 3.53 0.726 0.15266 0.57158
RegenerationR6 -0.324 0.726 0.99988 1.00000
RegenerationBL -1.417 0.726 0.99995 1.00000
RegenerationTP -0.72 0.726 0.99996 1.00000


Genes with expression patterns similar to MligTC455_08894

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_08894 18 0.37 Mlig455_005112

Neo: -

Age: -

 1 - - - - 1.000 - Mlig455_005112 {REF} {Length: 603} {RNA1310_92971}
2. MligTC455_05488 5 0.11 Mlig455_016353

Neo: -

Age: -

 0.985 - - - - 0.985 - Mlig455_016353 {REF} {Length: 513} {NoTransDecoderORF}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA