TomoSeq data search

Data search

Results for MligTC455_08989

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_08989	293	6.10	Mlig455_062728	Neo: Germline Age: - Region-enriched R5: 1.817/0.00728	TRIM59	Mlig455_062728 {REF} {Length: 2543} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=41.1]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=39.9]; Ring finger domain [PF13639.8, score=37.5]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=36.9]; RING-type zinc-finger [PF13445.8, score=32.4]; zinc-RING finger domain [PF14634.8, score=31.0]; zinc finger of C3HC4-type, RING [PF15227.8, score=29.6]; RING-H2 zinc finger domain [PF12678.9, score=25.2]; Prokaryotic RING finger family 4 [PF14447.8, score=24.9]} {Human: ENSG00000213186, TRIM59, tripartite motif containing 59, [Score=64.7, Expect=2e-11]; ENSG00000248710, AC079594.2, novel tripartite motif-containing 59 (TRIM59) and intraflagellar transport 80 homolog (Chlamydomonas) (IFT80) protein, [Score=63.2, Expect=1e-09]} {Mouse: ENSMUSG00000054517, Trim65, tripartite motif-containing 65, [RH, Score=57.8, Expect=2e-08]; ENSMUSG00000024457, Trim26, tripartite motif-containing 26, [RH, Score=56.6, Expect=2e-08]} {Dmel: FBgn0039150, CG13605, [Score=53.9, Expect=4e-07]} {Celegans: WBGene00044436, Y47G6A.31, [RH, Score=48.1, Expect=6e-06]} {Smed: dd_Smed_v6_10019_0_1, dd_Smed_v6_10019_0_1, [RH, Score=53.1, Expect=1e-07]} {RNA1509_14257} {RNA1310_7434, RNA1509_14257} {RNA1509_14257, RNA815_2621}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_08989

293

6.10

Mlig455_062728

Neo: Germline

Age: -

Region-enriched R5: 1.817/0.00728

TRIM59

Mlig455_062728 {REF} {Length: 2543} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=41.1]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=39.9]; Ring finger domain [PF13639.8, score=37.5]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=36.9]; RING-type zinc-finger [PF13445.8, score=32.4]; zinc-RING finger domain [PF14634.8, score=31.0]; zinc finger of C3HC4-type, RING [PF15227.8, score=29.6]; RING-H2 zinc finger domain [PF12678.9, score=25.2]; Prokaryotic RING finger family 4 [PF14447.8, score=24.9]} {Human: ENSG00000213186, TRIM59, tripartite motif containing 59, [Score=64.7, Expect=2e-11]; ENSG00000248710, AC079594.2, novel tripartite motif-containing 59 (TRIM59) and intraflagellar transport 80 homolog (Chlamydomonas) (IFT80) protein, [Score=63.2, Expect=1e-09]} {Mouse: ENSMUSG00000054517, Trim65, tripartite motif-containing 65, [RH, Score=57.8, Expect=2e-08]; ENSMUSG00000024457, Trim26, tripartite motif-containing 26, [RH, Score=56.6, Expect=2e-08]} {Dmel: FBgn0039150, CG13605, [Score=53.9, Expect=4e-07]} {Celegans: WBGene00044436, Y47G6A.31, [RH, Score=48.1, Expect=6e-06]} {Smed: dd_Smed_v6_10019_0_1, dd_Smed_v6_10019_0_1, [RH, Score=53.1, Expect=1e-07]} {RNA1509_14257} {RNA1310_7434, RNA1509_14257} {RNA1509_14257, RNA815_2621}

Cumulative graph for MligTC455_08989

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.334	3.296	0.44436	1.00000
RegionR2	-0.291	3.296	0.75608	1.00000
RegionR3	0.043	3.296	0.93228	1.00000
RegionR4	1.608	3.296	0.00908	0.05677
RegionR5	1.817	3.296	0.00066	0.00728
RegionR6	0.316	3.296	0.63875	1.00000
RegionR7	-1.54	3.296	0.22570	0.84647
RegionR8	-0.619	3.296	0.66664	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.354	3.296	0.55441	1.00000
RegenerationR2	0.664	3.296	0.39056	0.80870
RegenerationR3	0.983	3.296	0.18675	0.62266
RegenerationR4	0.012	3.296	0.97472	1.00000
RegenerationR5	-0.162	3.296	0.78146	0.98211
RegenerationR6	0.064	3.296	0.93127	1.00000
RegenerationBL	0.599	3.296	0.56680	0.92126
RegenerationTP	1.879	3.296	0.09612	0.48548

Genes with expression patterns similar to MligTC455_08989

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_08989	293	6.1	Mlig455_062728	Neo: Germline Age: - Region-enriched R5: 1.817/0.00728	TRIM59	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_062728 {REF} {Length: 2543} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=41.1]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=39.9]; Ring finger domain [PF13639.8, score=37.5]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=36.9]; RING-type zinc-finger [PF13445.8, score=32.4]; zinc-RING finger domain [PF14634.8, score=31.0]; zinc finger of C3HC4-type, RING [PF15227.8, score=29.6]; RING-H2 zinc finger domain [PF12678.9, score=25.2]; Prokaryotic RING finger family 4 [PF14447.8, score=24.9]} {Human: ENSG00000213186, TRIM59, tripartite motif containing 59, [Score=64.7, Expect=2e-11]; ENSG00000248710, AC079594.2, novel tripartite motif-containing 59 (TRIM59) and intraflagellar transport 80 homolog (Chlamydomonas) (IFT80) protein, [Score=63.2, Expect=1e-09]} {Mouse: ENSMUSG00000054517, Trim65, tripartite motif-containing 65, [RH, Score=57.8, Expect=2e-08]; ENSMUSG00000024457, Trim26, tripartite motif-containing 26, [RH, Score=56.6, Expect=2e-08]} {Dmel: FBgn0039150, CG13605, [Score=53.9, Expect=4e-07]} {Celegans: WBGene00044436, Y47G6A.31, [RH, Score=48.1, Expect=6e-06]} {Smed: dd_Smed_v6_10019_0_1, dd_Smed_v6_10019_0_1, [RH, Score=53.1, Expect=1e-07]} {RNA1509_14257} {RNA1310_7434, RNA1509_14257} {RNA1509_14257, RNA815_2621}
2.	MligTC455_10751	210	4.37	Mlig455_006482	Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.083 Region-enriched R5: 1.631/0.01575		1.774	-	-	0.964	0.810	-	-	Mlig455_006482 {REF} {Length: 858} {RNA1509_56607} {RNA1310_53537.1} {RNA815_22579}
3.	MligTC455_13714	219	4.55	Mlig455_039476	Neo: - Age: - Region-enriched R4: 5.355/0.00070 Region-enriched R5: 3.269/0.00973		1.702	-	-	0.969	-	-	0.733	Mlig455_039476 {REF} {Length: 684} {NoTransDecoderORF} {RNA1509_296, RNA1509_36260, RNA1509_3658} {RNA1310_1675.1, RNA1509_296, RNA1509_3658} {RNA1509_296, RNA1509_3658, RNA815_2514.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts