M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_08995

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_08995 11 0.24 Mlig455_008506

Neo: -

Age: -

 KCNA1 Mlig455_008506 {REF} {Length: 3906} {Pfam: Ion transport protein [PF00520.33, score=138.4]; BTB/POZ domain [PF02214.24, score=80.0]; Ion channel [PF07885.18, score=52.6]} {Human: ENSG00000111262, KCNA1, potassium voltage-gated channel subfamily A member 1, [Score=392, Expect=3e-131]; ENSG00000177301, KCNA2, potassium voltage-gated channel subfamily A member 2, [Score=390, Expect=2e-130]; ENSG00000177272, KCNA3, potassium voltage-gated channel subfamily A member 3, [Score=376, Expect=1e-123]} {Mouse: ENSMUSG00000047976, Kcna1, potassium voltage-gated channel, shaker-related subfamily, member 1, [Score=392, Expect=5e-131]; ENSMUSG00000040724, Kcna2, potassium voltage-gated channel, shaker-related subfamily, member 2, [Score=390, Expect=1e-130]; ENSMUSG00000047959, Kcna3, potassium voltage-gated channel, shaker-related subfamily, member 3, [Score=375, Expect=3e-124]} {Dmel: FBgn0003380, Sh, Shaker, [Score=394, Expect=4e-130]} {Celegans: WBGene00014261, shk-1, Potassium voltage-gated channel protein shk-1, [Score=294, Expect=4e-94]} {Smed: dd_Smed_v6_15133_0_1, dd_Smed_v6_15133_0_1, [RH, Score=556, Expect=0.0]} {RNA1509_46497} {RNA1310_41683} {RNA815_28293}

Cumulative graph for MligTC455_08995

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_08995

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_08995 11 0.24 Mlig455_008506

Neo: -

Age: -

 KCNA1 2 - 1.000 - - 1.000 - Mlig455_008506 {REF} {Length: 3906} {Pfam: Ion transport protein [PF00520.33, score=138.4]; BTB/POZ domain [PF02214.24, score=80.0]; Ion channel [PF07885.18, score=52.6]} {Human: ENSG00000111262, KCNA1, potassium voltage-gated channel subfamily A member 1, [Score=392, Expect=3e-131]; ENSG00000177301, KCNA2, potassium voltage-gated channel subfamily A member 2, [Score=390, Expect=2e-130]; ENSG00000177272, KCNA3, potassium voltage-gated channel subfamily A member 3, [Score=376, Expect=1e-123]} {Mouse: ENSMUSG00000047976, Kcna1, potassium voltage-gated channel, shaker-related subfamily, member 1, [Score=392, Expect=5e-131]; ENSMUSG00000040724, Kcna2, potassium voltage-gated channel, shaker-related subfamily, member 2, [Score=390, Expect=1e-130]; ENSMUSG00000047959, Kcna3, potassium voltage-gated channel, shaker-related subfamily, member 3, [Score=375, Expect=3e-124]} {Dmel: FBgn0003380, Sh, Shaker, [Score=394, Expect=4e-130]} {Celegans: WBGene00014261, shk-1, Potassium voltage-gated channel protein shk-1, [Score=294, Expect=4e-94]} {Smed: dd_Smed_v6_15133_0_1, dd_Smed_v6_15133_0_1, [RH, Score=556, Expect=0.0]} {RNA1509_46497} {RNA1310_41683} {RNA815_28293}
2. MligTC455_47188 6 0.12 Mlig455_053217

Neo: -

Age: -

 MAP3K4 0.999 - - - - 0.999 - Mlig455_053217 {REF} {Length: 1979} {Pfam: Protein kinase domain [PF00069.27, score=163.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=130.2]; Ankyrin repeats (3 copies) [PF12796.9, score=41.1]; Ankyrin repeats (many copies) [PF13637.8, score=30.8]; Ankyrin repeat [PF13606.8, score=26.3]; Ankyrin repeat [PF00023.32, score=23.0]; ABC1 atypical kinase-like domain [PF03109.18, score=21.7]; Ankyrin repeats (many copies) [PF13857.8, score=21.3]; Fungal protein kinase [PF17667.3, score=17.6]} {Human: ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [Score=137, Expect=1e-33]} {Mouse: ENSMUSG00000014426, Map3k4, mitogen-activated protein kinase kinase kinase 4, [Score=132, Expect=3e-32]} {Dmel: FBgn0024329, Mekk1, [Score=133, Expect=2e-32]} {Celegans: WBGene00003472, mtk-1, MTK1/MEKK4 homolog, [Score=115, Expect=1e-26]} {Smed: dd_Smed_v6_4849_0_2, dd_Smed_v6_4849_0_2, [Score=110, Expect=3e-25]} {RNA1509_28291} {RNA1310_43256} {RNA815_16925}
3. MligTC455_54944 2 0.04 Mlig455_051084

Neo: -

Age: -

 0.999 - - - - 0.999 - Mlig455_051084 {REF} {Length: 89} {NoTransDecoderORF} {RNA1310_61862.1} {RNA815_55535}
4. MligTC455_06684 9 0.18 Mlig455_005381

Neo: -

Age: -

 0.996 - - - - 0.996 - Mlig455_005381 {REF} {Length: 621} {NoTransDecoderORF} {RNA1310_32917} {RNA815_38662}
5. MligTC455_34277 14 0.29 Mlig455_031537

Neo: -

Age: Down-Up-Down

 ZBTB16 0.996 - - - - 0.996 - Mlig455_031537 {REF} {Length: 3719} {Pfam: C2H2-type zinc-finger domain [PF13909.8, score=59.8]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=20.3]; C2H2-type zinc finger [PF13894.8, score=19.4]} {Human: ENSG00000109906, ZBTB16, zinc finger and BTB domain containing 16, [Score=52.8, Expect=2e-06]; ENSG00000084093, REST, RE1 silencing transcription factor, [Score=52.0, Expect=5e-06]} {Mouse: ENSMUSG00000026135, Zfp142, zinc finger protein 142, [Score=62.4, Expect=3e-09]} {Dmel: FBgn0262160, CG9932, [RH, Score=66.6, Expect=9e-11]} {Celegans: WBGene00001824, hbl-1, Hunchback-like protein, [Score=50.1, Expect=6e-06]} {Smed: dd_Smed_v6_36433_0_1, dd_Smed_v6_36433_0_1, [RH, Score=177, Expect=2e-48]} {RNA1509_19024} {RNA1310_45424} {RNA815_39699}
6. MligTC455_34279 55 1.15 Mlig455_056988

Neo: -

Age: -

 ZBTB16 0.996 - - - - 0.996 - Mlig455_056988 {REF} {Length: 3794} {Pfam: C2H2-type zinc-finger domain [PF13909.8, score=57.5]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=23.3]} {Human: ENSG00000109906, ZBTB16, zinc finger and BTB domain containing 16, [Score=52.8, Expect=2e-06]; ENSG00000084093, REST, RE1 silencing transcription factor, [Score=52.0, Expect=5e-06]} {Mouse: ENSMUSG00000026135, Zfp142, zinc finger protein 142, [Score=62.4, Expect=3e-09]} {Dmel: FBgn0262160, CG9932, [RH, Score=66.6, Expect=9e-11]} {Celegans: WBGene00001824, hbl-1, Hunchback-like protein, [Score=50.4, Expect=6e-06]} {Smed: dd_Smed_v6_36433_0_1, dd_Smed_v6_36433_0_1, [Score=176, Expect=9e-48]} {RNA1509_19024} {RNA1310_45424} {RNA815_39699}
7. MligTC455_10525 7 0.14 Mlig455_036520, Mlig455_069131

Neo: -

Age: -

 0.995 - - - - 0.995 -

Mlig455_036520 {REF} {Length: 362} {RNA1310_42261}

Mlig455_069131 {REF} {Length: 359} {RNA1310_42261}
8. MligTC455_12294 25 0.53 Mlig455_042579

Neo: -

Age: -

 0.995 - - - - 0.995 - Mlig455_042579 {REF} {Length: 435} {NoTransDecoderORF} {RNA1310_80647}
9. MligTC455_18202 43 0.9 Mlig455_033558

Neo: -

Age: Up-Down-Down

 NPY1R 0.995 - - - - 0.995 - Mlig455_033558 {REF} {Length: 1975} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=98.1]} {Human: ENSG00000164128, NPY1R, neuropeptide Y receptor Y1, [Score=72.4, Expect=3e-13]} {Mouse: ENSMUSG00000020090, Npffr1, neuropeptide FF receptor 1, [Score=69.3, Expect=2e-12]; ENSMUSG00000036437, Npy1r, neuropeptide Y receptor Y1, [Score=67.8, Expect=8e-12]} {Dmel: FBgn0037408, NPFR, Neuropeptide F receptor, [Score=82.0, Expect=2e-16]} {Celegans: WBGene00018067, npr-7, NeuroPeptide Receptor family, [Score=73.6, Expect=6e-14]} {Smed: dd_Smed_v6_29182_0_1, dd_Smed_v6_29182_0_1, [Score=80.1, Expect=2e-16]} {RNA1310_56954} {RNA815_50324}
10. MligTC455_15199 6 0.13 Mlig455_054486

Neo: -

Age: -

 0.993 - - - - 0.993 - Mlig455_054486 {REF} {Length: 271} {NoTransDecoderORF}
11. MligTC455_18055 48 1 Mlig455_037951

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.998

 ANKRD50 0.993 - - - - 0.993 - Mlig455_037951 {REF} {Length: 3486} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=143.0]; Ankyrin repeats (many copies) [PF13637.8, score=109.2]; Ankyrin repeat [PF13606.8, score=63.4]; Ankyrin repeats (many copies) [PF13857.8, score=51.7]; Ankyrin repeat [PF00023.32, score=47.4]} {Human: ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=114, Expect=3e-25]} {Mouse: ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=114, Expect=2e-25]} {Dmel: FBgn0043884, mask, multiple ankyrin repeats single KH domain, [Score=84.3, Expect=3e-16]} {Celegans: WBGene00012124, T28D6.4, [Score=71.6, Expect=1e-12]} {Smed: dd_Smed_v6_5303_0_2, dd_Smed_v6_5303_0_2, [Score=104, Expect=6e-23]} {RNA1509_58829} {RNA1310_31738} {RNA815_33130}
12. MligTC455_08229 4 0.08 Mlig455_041581

Neo: -

Age: -

 0.989 - - - - 0.989 - Mlig455_041581 {REF} {Length: 305} {NoTransDecoderORF} {tRNA: Trp(CCA), score=71.2}
13. MligTC455_44135 20 0.41 Mlig455_040240

Neo: -

Age: -

 GLRA3 0.989 - - - - 0.989 - Mlig455_040240 {REF} {Length: 3041} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=152.9]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=112.4]} {Human: ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=322, Expect=4e-105]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=316, Expect=3e-103]; ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=314, Expect=2e-102]} {Mouse: ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=322, Expect=2e-105]; ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=315, Expect=4e-103]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=307, Expect=9e-100]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=306, Expect=3e-99]} {Dmel: FBgn0024963, GluClalpha, [Score=295, Expect=4e-95]} {Celegans: WBGene00001586, ggr-1, Glycine receptor subunit beta-type 4, [RH, Score=258, Expect=7e-81]} {Smed: dd_Smed_v6_11342_0_1, dd_Smed_v6_11342_0_1, [Score=263, Expect=2e-83]} {RNA1310_26099} {RNA815_23562}
14. MligTC455_46466 37 0.76 Mlig455_009031

Neo: -

Age: -

 SLCO1A2 0.989 - - - - 0.989 - Mlig455_009031 {REF} {Length: 3247} {Pfam: Organic Anion Transporter Polypeptide (OATP) family [PF03137.22, score=343.2]; Major Facilitator Superfamily [PF07690.18, score=56.5]; Kazal-type serine protease inhibitor domain [PF07648.17, score=22.9]} {Human: ENSG00000084453, SLCO1A2, solute carrier organic anion transporter family member 1A2, [Score=177, Expect=2e-46]} {Mouse: ENSMUSG00000079262, Slco1a6, solute carrier organic anion transporter family, member 1a6, [Score=195, Expect=1e-52]; ENSMUSG00000041698, Slco1a1, solute carrier organic anion transporter family, member 1a1, [Score=192, Expect=1e-51]; ENSMUSG00000038963, Slco4a1, solute carrier organic anion transporter family, member 4a1, [Score=187, Expect=7e-50]} {Dmel: FBgn0036732, Oatp74D, Organic anion transporting polypeptide 74D, [Score=197, Expect=5e-53]} {Celegans: WBGene00013499, Y70G10A.3, Solute carrier organic anion transporter family member, [Score=153, Expect=1e-38]} {Smed: dd_Smed_v6_3499_0_1, dd_Smed_v6_3499_0_1, [Score=217, Expect=4e-61]} {RNA1310_19417.2} {RNA815_13034.1}
15. MligTC455_18834 33 0.68 Mlig455_000603

Neo: -

Age: -

 0.988 - - - - 0.988 - Mlig455_000603 {REF} {Length: 1888} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=22.2]} {RNA1310_27913} {RNA815_25050}
16. MligTC455_32425 5 0.11 Mlig455_036278

Neo: -

Age: Up-Down-Up

 NWD2 0.985 - - - - 0.985 - Mlig455_036278 {REF} {Length: 5375} {Human: ENSG00000174145, NWD2, NACHT and WD repeat domain containing 2, [Score=77.8, Expect=9e-14]} {Mouse: ENSMUSG00000090061, Nwd2, NACHT and WD repeat domain containing 2, [Score=77.0, Expect=1e-13]} {Dmel: FBgn0038397, CG10185, [Score=103, Expect=8e-22]} {Celegans: WBGene00020254, T05C3.2, [Score=114, Expect=3e-25]} {RNA1509_3054} {RNA1310_322} {RNA815_139.1}
17. MligTC455_33348 1299 27.07 Mlig455_045003

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.437

Region-enriched R6: 7.710/0.00000
Region-enriched R2: 4.220/0.02946

 0.985 - - - - 0.985 - Mlig455_045003 {REF} {Length: 2014} {RNA1509_23790} {RNA1310_46851, RNA1509_23790} {RNA1509_23790, RNA815_33507}
18. MligTC455_40018 295 6.15 Mlig455_037646, Mlig455_069914

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.048

Region-enriched R8: 4.445/0.00001
Region-enriched R7: 3.788/0.00007

 AC243734.1, CHRNA2 0.984 - - - - 0.984 -

Mlig455_037646 {REF} {Length: 2101} {TRANSSPLICED} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=46.2]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=27.0]} {Human: ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=68.9, Expect=6e-12]; ENSG00000101204, CHRNA4, cholinergic receptor nicotinic alpha 4 subunit, [Score=65.5, Expect=8e-11]} {Mouse: ENSMUSG00000035594, Chrna5, cholinergic receptor, nicotinic, alpha polypeptide 5, [Score=75.5, Expect=3e-14]; ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [Score=73.2, Expect=2e-13]} {Dmel: FBgn0032151, nAChRalpha6, nicotinic Acetylcholine Receptor alpha6, [Score=82.8, Expect=9e-17]} {Celegans: WBGene00006774, unc-38, Acetylcholine receptor subunit alpha-type unc-38, [Score=71.2, Expect=4e-13]} {Smed: dd_Smed_v6_8486_0_1, dd_Smed_v6_8486_0_1, [Score=78.2, Expect=2e-15]} {RNA1509_50033} {RNA1310_22440} {RNA815_15508}

Mlig455_069914 {REF} {Length: 3748} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=68.5]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=60.3]} {Human: ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=108, Expect=5e-25]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=108, Expect=9e-25]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=108, Expect=5e-25]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=107, Expect=1e-24]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=99.4, Expect=5e-22]} {Celegans: WBGene00000951, deg-3, Acetylcholine receptor subunit alpha-type deg-3, [Score=94.0, Expect=3e-20]} {Smed: dd_Smed_v6_23922_0_1, dd_Smed_v6_23922_0_1, [Score=113, Expect=7e-27]} {RNA1509_50033} {RNA1310_16096, RNA1509_50033} {RNA1509_50033, RNA815_15508}
19. MligTC455_05870 60 1.25 Mlig455_062138

Neo: -

Age: -

 0.983 - - - - 0.983 - Mlig455_062138 {REF} {Length: 1049} {NoTransDecoderORF} {RNA1310_117144}
20. MligTC455_03139 8 0.16 Mlig455_039544

Neo: -

Age: -

 PRR9 0.982 - - - - 0.982 - Mlig455_039544 {REF} {Length: 646} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=48.5, Expect=2e-07]}
21. MligTC455_00203 3 0.06 Mlig455_051710

Neo: -

Age: -

 0.975 - - - - 0.975 - Mlig455_051710 {REF} {Length: 302} {NoTransDecoderORF}
22. MligTC455_11615 3 0.07 Mlig455_052124

Neo: -

Age: -

 0.975 - - - - 0.975 - Mlig455_052124 {REF} {Length: 463} {NoTransDecoderORF} {RNA1310_125660}
23. MligTC455_11764 3 0.05 Mlig455_038701

Neo: -

Age: -

 ASIC5 0.975 - - - - 0.975 - Mlig455_038701 {REF} {Length: 2030} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=188.7]} {Human: ENSG00000256394, ASIC5, acid sensing ion channel subunit family member 5, [Score=64.3, Expect=3e-10]} {Mouse: ENSMUSG00000028008, Asic5, acid-sensing (proton-gated) ion channel family member 5, [Score=64.7, Expect=2e-10]; ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=63.2, Expect=6e-10]} {Celegans: WBGene00012116, del-4, DEgenerin Like, [Score=77.8, Expect=7e-15]} {Smed: dd_Smed_v6_12878_0_1, dd_Smed_v6_12878_0_1, [Score=105, Expect=8e-24]} {RNA1310_63403} {RNA815_41862}
24. MligTC455_13276 3 0.06 Mlig455_023464

Neo: -

Age: -

 0.975 - - - - 0.975 - Mlig455_023464 {REF} {Length: 339} {NoTransDecoderORF} {RNA1310_137491}
25. MligTC455_53185 11 0.22 Mlig455_034069

Neo: -

Age: -

 0.975 - - - - 0.975 - Mlig455_034069 {REF} {Length: 1725} {RNA1310_48228} {RNA815_37322}
26. MligTC455_57301 6 0.13 Mlig455_045739

Neo: -

Age: -

 0.975 - - - - 0.975 - Mlig455_045739 {REF} {Length: 397} {NoTransDecoderORF} {RNA1310_134600}
27. MligTC455_18455 450 9.38 Mlig455_025340

Neo: -

Age: Down-Up-Up

Region-enriched R6: 8.097/0.00000
Region-enriched R2: 7.283/0.00002

 0.974 - - - - 0.974 - Mlig455_025340 {REF} {Length: 799} {RNA1509_31308, RNA1509_43509} {RNA1310_53601, RNA1509_43509} {RNA1509_43509, RNA815_21102}
28. MligTC455_03311 56 1.17 Mlig455_002545, Mlig455_002588

Neo: Int S/G2/M

Age: -

 0.973 - - - - 0.973 -

Mlig455_002545 {REF} {Length: 740} {NoTransDecoderORF} {RNA1310_130432} {RNA815_14633}

Mlig455_002588 {REF} {Length: 817} {RNA1310_130432} {RNA815_14633}
29. MligTC455_29390 64 1.33 Mlig455_054432

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=1.814

 TTLL10 0.971 - - - - 0.971 - Mlig455_054432 {REF} {Length: 3111} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=159.2]; YheC/D like ATP-grasp [PF14398.8, score=31.4]} {Human: ENSG00000162571, TTLL10, tubulin tyrosine ligase like 10, [Score=202, Expect=8e-57]} {Mouse: ENSMUSG00000029074, Ttll10, tubulin tyrosine ligase-like family, member 10, [Score=201, Expect=4e-56]} {Dmel: FBgn0030823, CG8918, [Score=116, Expect=2e-27]} {Celegans: WBGene00044187, ttll-9, Tubulin Tyrosine Ligase Like, [Score=98.6, Expect=5e-22]} {Smed: dd_Smed_v6_9664_0_1, dd_Smed_v6_9664_0_1, [Score=203, Expect=1e-57]} {RNA1509_45551} {RNA1310_23793, RNA1509_45551} {RNA1509_45551, RNA815_15775}
30. MligTC455_11899 25 0.52 Mlig455_049912

Neo: -

Age: -

 0.97 - - - - 0.970 - Mlig455_049912 {REF} {Length: 1251} {NoTransDecoderORF} {RNA1509_59327} {RNA1310_138888} {RNA815_6259}
31. MligTC455_32698 12 0.26 Mlig455_063138

Neo: -

Age: -

 0.969 - - - - 0.969 - Mlig455_063138 {REF} {Length: 1343} {NoTransDecoderORF} {RNA1509_44182} {RNA1310_52699} {RNA815_26754.1}
32. MligTC455_08714 6 0.12 Mlig455_012167

Neo: -

Age: -

 0.967 - - - - 0.967 - Mlig455_012167 {REF} {Length: 312} {NoTransDecoderORF} {RNA1509_29268} {RNA1310_107364} {RNA815_51387}
33. MligTC455_31888 153 3.19 Mlig455_019662, Mlig455_024517, Mlig455_031442, Mlig455_033592, Mlig455_053219, Mlig455_067079

Neo: -

Age: Down-Up-Down

 0.967 - - - - 0.967 -

Mlig455_019662 {REF} {Length: 600} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4806) [PF16064.7, score=20.2]} {RNA1509_28268} {RNA1310_1293.1} {RNA815_1077}

Mlig455_024517 {REF} {Length: 1758} {TRANSSPLICED} {RNA1509_37997} {RNA1310_25701.2} {RNA815_1077}

Mlig455_031442 {REF} {Length: 1519} {TRANSSPLICED} {RNA1509_2283} {RNA1310_1293.1} {RNA815_1077}

Mlig455_033592 {REF} {Length: 1488} {TRANSSPLICED} {RNA1509_28268} {RNA1310_1293.1} {RNA815_1077}

Mlig455_053219 {REF} {Length: 914} {TRANSSPLICED} {RNA1509_13363} {RNA1310_1293.1} {RNA815_1077}

Mlig455_067079 {REF} {Length: 599} {TRANSSPLICED} {RNA1509_28268} {RNA1310_1293.1} {RNA815_1077}
34. MligTC455_13729 55 1.15 Mlig455_025374, Mlig455_025422

Neo: -

Age: Up-Down-Up

 0.965 - - - - 0.965 -

Mlig455_025374 {REF} {Length: 2416} {Pfam: Innexin [PF00876.20, score=384.4]} {Dmel: FBgn0027108, Inx2, Innexin 2, [Score=107, Expect=2e-25]} {Celegans: WBGene00002123, inx-1, Innexin, [Score=358, Expect=8e-122]} {Smed: dd_Smed_v6_11077_0_2, dd_Smed_v6_11077_0_2, [Score=351, Expect=1e-117]} {RNA1310_71151} {RNA815_44601}

Mlig455_025422 {REF} {Length: 2321} {Pfam: Innexin [PF00876.20, score=381.6]} {Dmel: FBgn0027108, Inx2, Innexin 2, [Score=105, Expect=4e-25]} {Celegans: WBGene00002123, inx-1, Innexin, [Score=355, Expect=1e-120]} {Smed: dd_Smed_v6_11077_0_1, dd_Smed_v6_11077_0_1, [Score=358, Expect=9e-121]} {RNA1310_71151} {RNA815_44601}
35. MligTC455_09870 8 0.17 Mlig455_053392

Neo: -

Age: -

 0.964 - - - - 0.964 - Mlig455_053392 {REF} {Length: 338} {NoTransDecoderORF} {RNA1310_87210}
36. MligTC455_10597 50 1.03 Mlig455_000567

Neo: -

Age: -

 GRIK3 0.962 - 0.962 - - - - Mlig455_000567 {REF} {Length: 3419} {Pfam: Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=70.9]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=51.0]; Ligand-gated ion channel [PF00060.28, score=43.2]} {Human: ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=148, Expect=5e-36]; ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=145, Expect=3e-35]; ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=141, Expect=8e-34]} {Mouse: ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=146, Expect=1e-35]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=145, Expect=2e-35]; ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=144, Expect=8e-35]} {Dmel: FBgn0039916, Ekar, Eye-enriched kainate receptor, [Score=131, Expect=4e-31]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [Score=134, Expect=4e-32]} {Smed: dd_Smed_v6_14655_0_1, dd_Smed_v6_14655_0_1, [Score=148, Expect=1e-36]} {RNA1509_59839} {RNA1310_4586, RNA1509_59839} {RNA1509_59839, RNA815_2154.1}
37. MligTC455_06065 6 0.12 Mlig455_070359

Neo: -

Age: -

 0.961 - - - - 0.961 - Mlig455_070359 {REF} {Length: 170} {NoTransDecoderORF} {RNA1310_21719}
38. MligTC455_22299 80 1.66 Mlig455_036117, Mlig455_036152

Neo: -

Age: -

Region-enriched R2: 5.778/0.00200

Regeneration-upregulated R6: 5.934

Regeneration-enriched R6: 5.934

 MEIS2 0.961 - - - - 0.961 -

Mlig455_036117 {REF} {Length: 2604} {Pfam: Homeobox KN domain [PF05920.13, score=63.7]; Homeodomain [PF00046.31, score=33.3]} {Human: ENSG00000134138, MEIS2, Meis homeobox 2, [Score=72.8, Expect=5e-13]; ENSG00000105419, MEIS3, Meis homeobox 3, [Score=72.0, Expect=5e-13]; ENSG00000143995, MEIS1, Meis homeobox 1, [Score=70.9, Expect=2e-12]} {Mouse: ENSMUSG00000027210, Meis2, Meis homeobox 2, [Score=72.8, Expect=3e-13]; ENSMUSG00000041420, Meis3, Meis homeobox 3, [Score=72.0, Expect=3e-13]; ENSMUSG00000020160, Meis1, Meis homeobox 1, [Score=70.9, Expect=1e-12]} {Dmel: FBgn0001235, hth, homothorax, [Score=71.6, Expect=4e-13]} {Celegans: WBGene00006796, unc-62, Homeobox protein unc-62, [Score=73.2, Expect=1e-13]} {Smed: dd_Smed_v6_7863_0_1, dd_Smed_v6_7863_0_1, [RH, Score=101, Expect=2e-22]} {RNA1509_22023} {RNA1310_68231} {RNA815_37254}

Mlig455_036152 {REF} {Length: 2773} {Pfam: Homeobox KN domain [PF05920.13, score=63.8]; Homeodomain [PF00046.31, score=32.8]} {Human: ENSG00000134138, MEIS2, Meis homeobox 2, [Score=72.0, Expect=5e-13]; ENSG00000105419, MEIS3, Meis homeobox 3, [Score=71.6, Expect=6e-13]; ENSG00000143995, MEIS1, Meis homeobox 1, [Score=70.5, Expect=2e-12]} {Mouse: ENSMUSG00000027210, Meis2, Meis homeobox 2, [Score=72.0, Expect=4e-13]; ENSMUSG00000041420, Meis3, Meis homeobox 3, [Score=72.0, Expect=3e-13]; ENSMUSG00000020160, Meis1, Meis homeobox 1, [Score=70.9, Expect=1e-12]} {Dmel: FBgn0001235, hth, homothorax, [Score=71.2, Expect=5e-13]} {Celegans: WBGene00006796, unc-62, Homeobox protein unc-62, [Score=72.8, Expect=1e-13]} {Smed: dd_Smed_v6_7863_0_1, dd_Smed_v6_7863_0_1, [RH, Score=101, Expect=1e-22]} {RNA1509_22023} {RNA1310_68231} {RNA815_37254}
39. MligTC455_29247 1188 24.75 Mlig455_015220

Neo: -

Age: Down-Up-Down

Region-enriched R3: 5.526/0.00000
Region-enriched R2: 4.436/0.00748

 0.961 - 0.961 - - - - Mlig455_015220 {REF} {Length: 759} {RNA1509_12131, RNA1509_21359} {RNA1310_60432.2, RNA1509_12131, RNA1509_21359} {RNA1509_12131, RNA1509_21359, RNA815_30474}
40. MligTC455_38196 7 0.14 Mlig455_001332

Neo: -

Age: -

 0.961 - - - - 0.961 - Mlig455_001332 {REF} {Length: 1961} {Pfam: MULE transposase domain [PF10551.11, score=42.7]; FLYWCH zinc finger domain [PF04500.18, score=32.2]} {Smed: dd_Smed_v6_23674_0_4, dd_Smed_v6_23674_0_4, [RH, Score=102, Expect=1e-25]} {RNA1310_144822} {RNA815_51612}
41. MligTC455_49501 35 0.73 Mlig455_052405

Neo: -

Age: Up-Down-Down

 0.957 - - - - 0.957 - Mlig455_052405 {REF} {Length: 3588} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=33.8]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=19.7]} {RNA1509_45340} {RNA1310_37138} {RNA815_40548}
42. MligTC455_10600 44 0.91 Mlig455_000569

Neo: -

Age: -

 GRIK3 0.956 - 0.956 - - - - Mlig455_000569 {REF} {Length: 2818} {Pfam: Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=74.0]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=55.9]; Ligand-gated ion channel [PF00060.28, score=42.5]} {Human: ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=146, Expect=2e-35]; ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=143, Expect=2e-34]; ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=141, Expect=5e-34]; ENSG00000105737, GRIK5, glutamate ionotropic receptor kainate type subunit 5, [Score=139, Expect=3e-33]} {Mouse: ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=145, Expect=3e-35]; ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=144, Expect=6e-35]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=141, Expect=6e-34]; ENSMUSG00000032017, Grik4, glutamate receptor, ionotropic, kainate 4, [Score=140, Expect=2e-33]; ENSMUSG00000003378, Grik5, glutamate receptor, ionotropic, kainate 5 (gamma 2), [Score=139, Expect=4e-33]} {Dmel: FBgn0026255, clumsy, [Score=132, Expect=4e-31]} {Celegans: WBGene00001613, glr-2, Glutamate receptor 2, [Score=135, Expect=2e-32]} {Smed: dd_Smed_v6_14655_0_1, dd_Smed_v6_14655_0_1, [Score=155, Expect=6e-39]} {RNA1509_59839} {RNA1310_4586} {RNA815_2154.1}
43. MligTC455_17608 472 9.84 Mlig455_011446, Mlig455_061185

Neo: -

Age: -

Region-enriched R6: 2.727/0.00104

 0.956 - - - - 0.956 -

Mlig455_011446 {REF} {Length: 1142} {RNA1509_39006} {RNA1310_31565.1, RNA1509_39006} {RNA1509_39006, RNA815_21884}

Mlig455_061185 {REF} {Length: 1200} {RNA1509_39006} {RNA1310_31565.1} {RNA815_21884}
44. MligTC455_24329 3 0.07 Mlig455_011557, Mlig455_030664, Mlig455_057893

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.192

 SETMAR 0.956 - - - - 0.956 -

Mlig455_011557 {REF} {Length: 757} {Pfam: Transposase (partial DDE domain) [PF01359.20, score=61.0]; HTH domain in Mos1 transposase [PF17906.3, score=31.8]; Homeodomain-like domain [PF13565.8, score=27.3]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=73.6, Expect=2e-14]} {Smed: dd_Smed_v6_39823_0_1, dd_Smed_v6_39823_0_1, [RH, Score=48.1, Expect=2e-07]} {RNA1509_29601} {RNA1310_16439.1} {RNA815_14796}

Mlig455_030664 {REF} {Length: 1319} {Pfam: Transposase (partial DDE domain) [PF01359.20, score=88.8]; HTH domain in Mos1 transposase [PF17906.3, score=33.5]; DDE superfamily endonuclease [PF13358.8, score=28.2]; Homeodomain-like domain [PF13565.8, score=26.3]; Helix-turn-helix domain (DUF4817) [PF16087.7, score=20.4]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=176, Expect=4e-50]} {Smed: dd_Smed_v6_13618_0_23, dd_Smed_v6_13618_0_23, [RH, Score=78.6, Expect=5e-18]} {RNA1509_29601} {RNA1310_16439.1} {RNA815_14796}

Mlig455_057893 {REF} {Length: 1372} {Pfam: Transposase (partial DDE domain) [PF01359.20, score=85.7]; HTH domain in Mos1 transposase [PF17906.3, score=33.5]; DDE superfamily endonuclease [PF13358.8, score=28.0]; Homeodomain-like domain [PF13565.8, score=23.4]; Helix-turn-helix domain (DUF4817) [PF16087.7, score=20.4]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=176, Expect=7e-50]} {Smed: dd_Smed_v6_13618_0_23, dd_Smed_v6_13618_0_23, [RH, Score=79.0, Expect=4e-18]} {RNA1509_29601} {RNA1310_16439.1} {RNA815_14796}
45. MligTC455_25997 236 4.92 Mlig455_069262

Neo: -

Age: -

Region-enriched R5: 1.777/0.04733

 0.955 - - - - 0.955 - Mlig455_069262 {REF} {Length: 4569} {TRANSSPLICED} {RNA1509_54304, RNA1509_56297} {RNA1310_24884, RNA1509_54304, RNA1509_56297} {RNA1509_54304, RNA1509_56297, RNA815_13578}
46. MligTC455_40814 27 0.56 Mlig455_069639

Neo: -

Age: -

Regeneration-downregulated R2: -4.594

Regeneration-depleted R2: -4.594

 0.955 - - - - 0.955 - Mlig455_069639 {REF} {Length: 1762} {Pfam: Proline-rich membrane anchor 1 [PF16101.7, score=20.5]; Immunoglobulin domain [PF13927.8, score=19.1]; Immunoglobulin V-set domain [PF07686.19, score=18.7]} {RNA1310_67925} {RNA815_33630}
47. MligTC455_46353 31 0.64 Mlig455_001059

Neo: -

Age: -

 0.955 - - - - 0.955 - Mlig455_001059 {REF} {Length: 2081} {RNA1310_38644} {RNA815_43709}
48. MligTC455_04463 3 0.05 Mlig455_052889

Neo: -

Age: logFC(26M/2M)=3.761

 PRR9 0.952 - - - - 0.952 - Mlig455_052889 {REF} {Length: 1304} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=45.8, Expect=1e-05]}
49. MligTC455_13973 6 0.13 Mlig455_062040

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_062040 {REF} {Length: 634} {NoTransDecoderORF} {RNA1509_47371}
50. MligTC455_14143 12 0.25 Mlig455_013538

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_013538 {REF} {Length: 951} {NoTransDecoderORF} {RNA1509_26163} {RNA1310_103321} {RNA815_47548}
51. MligTC455_32102 22 0.45 Mlig455_036933

Neo: -

Age: Up-Down-Down

 0.952 - - - - 0.952 - Mlig455_036933 {REF} {Length: 2307} {RNA1509_41399} {RNA1310_15329} {RNA815_6647}
52. MligTC455_52002 18 0.37 Mlig455_015922

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_015922 {REF} {Length: 3702} {RNA1310_60405} {RNA815_40963}
53. MligTC455_35653 8 0.16 Mlig455_069303

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=2.809

 CD9 0.951 - - - - 0.951 - Mlig455_069303 {REF} {Length: 2023} {Pfam: Tetraspanin family [PF00335.22, score=69.6]} {Human: ENSG00000010278, CD9, CD9 molecule, [Score=64.3, Expect=1e-12]; ENSG00000110651, CD81, CD81 molecule, [Score=62.4, Expect=1e-11]} {Mouse: ENSMUSG00000030342, Cd9, CD9 antigen, [Score=67.0, Expect=2e-13]} {Dmel: FBgn0035936, Tsp66E, Tetraspanin 66E, [Score=80.5, Expect=2e-18]} {Celegans: WBGene00006635, tsp-9, Tetraspanin, [Score=45.1, Expect=8e-06]} {Smed: dd_Smed_v6_13639_0_1, dd_Smed_v6_13639_0_1, [Score=70.5, Expect=8e-15]} {RNA1509_2691} {RNA1310_19893.4} {RNA815_10761}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA