Data search


search
Exact
Search

Results for MligTC455_09024

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_09024 5 0.10 Mlig455_009061

Neo: -

Age: -

Mlig455_009061 {REF} {Length: 749} {RNA1310_75832} {RNA815_49210.1}

Cumulative graph for MligTC455_09024

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_09024

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_09024 5 0.1 Mlig455_009061

Neo: -

Age: -

1 1.000 - - - - - Mlig455_009061 {REF} {Length: 749} {RNA1310_75832} {RNA815_49210.1}
2. MligTC455_09025 12 0.25 Mlig455_003794, Mlig455_065651, Mlig455_067766

Neo: Int S/G2/M

Age: -

0.971 0.971 - - - - -

Mlig455_003794 {REF} {Length: 273} {NoTransDecoderORF} {RNA1310_75832} {RNA815_49210.1}

Mlig455_065651 {REF} {Length: 634} {NoTransDecoderORF} {RNA1310_93677} {RNA815_49210.1}

Mlig455_067766 {REF} {Length: 1058} {RNA1310_75832} {RNA815_49210.1}
3. MligTC455_34402 48 0.99 Mlig455_053893

Neo: Irradiation

Age: -

Region-enriched R4: 4.756/0.01468

0.969 0.969 - - - - - Mlig455_053893 {REF} {Length: 1335} {NoTransDecoderORF} {RNA1509_34695} {RNA1310_32236} {RNA815_37976}
4. MligTC455_51732 90 1.87 Mlig455_035307

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.988

0.964 0.964 - - - - - Mlig455_035307 {REF} {Length: 7790} {Pfam: Helical bimodular sensor domain [PF16591.7, score=108.0]; Alpha-2-macroglobulin RAP, C-terminal domain [PF06401.13, score=57.4]; Importin repeat 6 [PF18829.3, score=18.8]} {RNA1509_1390, RNA1509_23464, RNA1509_34475} {RNA1310_40189, RNA1509_1390, RNA1509_23464, RNA1509_34475} {RNA1509_1390, RNA1509_23464, RNA1509_34475, RNA815_35940}
5. MligTC455_26111 138 2.87 Mlig455_037012

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R4: 3.230/0.01537

0.952 0.952 - - - - - Mlig455_037012 {REF} {Length: 3108} {RNA1310_28088} {RNA815_5881.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA