M. lignano Tomo-Seq
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Results for MligTC455_09068

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_09068 27 0.56 Mlig455_034201

Neo: -

Age: -

 Mlig455_034201 {REF} {Length: 1589} {RNA1310_122256}

Cumulative graph for MligTC455_09068

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -6.674 1.009 0.99987 1.00000
RegionR2 3.513 1.009 0.23919 0.61357
RegionR3 2.171 1.009 0.34406 0.87974
RegionR4 -1.431 1.009 0.97826 1.00000
RegionR5 1.483 1.009 0.46928 0.83182
RegionR6 2.53 1.009 0.29521 0.88658
RegionR7 0.724 1.009 0.72514 1.00000
RegionR8 -2.315 1.009 0.99985 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 3.804 1.009 1.00000 1.00000
RegenerationR2 1.515 1.009 0.46199 0.85338
RegenerationR3 -0.301 1.009 0.92759 1.00000
RegenerationR4 3.047 1.009 0.26688 0.71419
RegenerationR5 1.414 1.009 0.47789 0.84598
RegenerationR6 -0.221 1.009 0.95658 1.00000
RegenerationBL 3.273 1.009 0.23880 0.59258
RegenerationTP 4.709 1.009 0.11967 0.52850


Genes with expression patterns similar to MligTC455_09068

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_09068 27 0.56 Mlig455_034201

Neo: -

Age: -

 3 - 1.000 - 1.000 - 1.000 Mlig455_034201 {REF} {Length: 1589} {RNA1310_122256}
2. MligTC455_22973 69 1.43 Mlig455_035875, Mlig455_035912, Mlig455_035913

Neo: -

Age: -

 0.98 - - - 0.980 - -

Mlig455_035875 {REF} {Length: 3712} {NoTransDecoderORF} {RNA1310_130183} {RNA815_30776}

Mlig455_035912 {REF} {Length: 1408} {NoTransDecoderORF} {RNA1310_102146} {RNA815_30776}

Mlig455_035913 {REF} {Length: 776} {NoTransDecoderORF} {RNA1310_29036.3}
3. MligTC455_14603 15 0.31 Mlig455_012376

Neo: -

Age: -

 0.971 - - - 0.971 - - Mlig455_012376 {REF} {Length: 271} {NoTransDecoderORF}
4. MligTC455_35256 142 2.97 Mlig455_040965

Neo: -

Age: -

 TJP1 0.959 - - - 0.959 - - Mlig455_040965 {REF} {Length: 4931} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=87.2]; PDZ domain [PF17820.3, score=67.1]; PDZ domain [PF13180.8, score=40.9]; ZU5 domain [PF00791.22, score=33.9]; Guanylate kinase [PF00625.23, score=26.1]} {Human: ENSG00000104067, TJP1, tight junction protein 1, [RH, Score=194, Expect=5e-50]; ENSG00000277401, TJP1, tight junction protein 1, [RH, Score=194, Expect=5e-50]; ENSG00000119139, TJP2, tight junction protein 2, [RH, Score=191, Expect=2e-49]; ENSG00000285130, AL358113.1, tight junction protein 2, [RH, Score=189, Expect=1e-48]} {Mouse: ENSMUSG00000030516, Tjp1, tight junction protein 1, [RH, Score=195, Expect=8e-51]; ENSMUSG00000024812, Tjp2, tight junction protein 2, [RH, Score=189, Expect=6e-49]} {Dmel: FBgn0262614, pyd, polychaetoid, [RH, Score=238, Expect=2e-64]} {Celegans: WBGene00013683, zoo-1, ZO-1 (Zonula Occludens tight junctional protein) Ortholog, [RH, Score=179, Expect=9e-46]} {Smed: dd_Smed_v6_5376_0_4, dd_Smed_v6_5376_0_4, [Score=51.6, Expect=3e-06]} {RNA1509_9093} {RNA1310_9173.1} {RNA815_19857}
5. MligTC455_07494 2 0.04 Mlig455_020453

Neo: -

Age: -

 0.956 - - - - - 0.956 Mlig455_020453 {REF} {Length: 252} {NoTransDecoderORF}
6. MligTC455_02424 1 0.03 Mlig455_020846

Neo: -

Age: -

 0.955 - - - - - 0.955 Mlig455_020846 {REF} {Length: 395} {NoTransDecoderORF} {RNA1310_83381} {RNA815_43376}
7. MligTC455_41224 14 0.28 Mlig455_045227

Neo: Int S/G2/M

Age: -

 0.952 - - - 0.952 - - Mlig455_045227 {REF} {Length: 697} {RNA1310_99359}
8. MligTC455_46585 37 0.76 Mlig455_014468

Neo: -

Age: -

 FOXL1 0.951 - - - 0.951 - - Mlig455_014468 {REF} {Length: 1626} {Pfam: Forkhead domain [PF00250.20, score=137.2]} {Human: ENSG00000176678, FOXL1, forkhead box L1, [Score=182, Expect=5e-55]} {Mouse: ENSMUSG00000097084, Foxl1, forkhead box L1, [Score=187, Expect=2e-57]} {Dmel: FBgn0014143, croc, crocodile, [Score=152, Expect=3e-42]} {Celegans: WBGene00004013, pha-4, Defective pharyngeal development protein 4, [Score=145, Expect=2e-40]} {Smed: dd_Smed_v6_19255_0_1, dd_Smed_v6_19255_0_1, [Score=175, Expect=2e-53]} {RNA1310_141907} {RNA815_63830}

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