M. lignano Tomo-Seq
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Results for MligTC455_09193

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_09193 13 0.27 Mlig455_013148

Neo: -

Age: -

Regeneration-enriched TP: 8.312
Regeneration-enriched R4: 5.656

 Mlig455_013148 {REF} {Length: 1174} {TRANSSPLICED} {Pfam: gag-polyprotein putative aspartyl protease [PF13975.8, score=30.1]; Aspartyl protease [PF13650.8, score=20.7]} {RNA1509_17786} {RNA1310_76852} {RNA815_3898.1}

Cumulative graph for MligTC455_09193

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -9.126 0.692 0.99972 1.00000
RegionR2 5.596 0.692 0.99989 1.00000
RegionR3 1.242 0.692 0.99950 1.00000
RegionR4 -0.754 0.692 0.99975 1.00000
RegionR5 -0.685 0.692 0.99952 1.00000
RegionR6 3.638 0.692 1.00000 1.00000
RegionR7 -0.796 0.692 0.99996 1.00000
RegionR8 0.885 0.692 0.99998 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 8.159 0.692 0.99994 1.00000
RegenerationR2 4.365 0.692 0.00035 0.02521
RegenerationR3 6.104 0.692 0.00075 0.04229
RegenerationR4 5.656 0.692 0.00002 0.00165
RegenerationR5 5.465 0.692 0.00010 0.01363
RegenerationR6 4.691 0.692 0.00028 0.01639
RegenerationBL 3.256 0.692 0.99996 1.00000
RegenerationTP 8.312 0.692 0.00003 0.00585


Genes with expression patterns similar to MligTC455_09193

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_09193 13 0.27 Mlig455_013148

Neo: -

Age: -

Regeneration-enriched TP: 8.312
Regeneration-enriched R4: 5.656

 2 - 1.000 - - - 1.000 Mlig455_013148 {REF} {Length: 1174} {TRANSSPLICED} {Pfam: gag-polyprotein putative aspartyl protease [PF13975.8, score=30.1]; Aspartyl protease [PF13650.8, score=20.7]} {RNA1509_17786} {RNA1310_76852} {RNA815_3898.1}
2. MligTC455_12857 14 0.29 Mlig455_001878

Neo: Irradiation

Age: Up-Down-Down

 1 - 1.000 - - - - Mlig455_001878 {REF} {Length: 3535} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=26.8]} {RNA1509_51271} {RNA1310_9335.1, RNA1509_51271} {RNA1509_51271, RNA815_14765}
3. MligTC455_41710 27 0.57 Mlig455_008167, Mlig455_008207

Neo: -

Age: -

 AC243734.1, CHRNA7 0.978 - 0.978 - - - -

Mlig455_008167 {REF} {Length: 2376} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=223.9]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=155.5]} {Human: ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=309, Expect=1e-98]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=309, Expect=1e-98]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=306, Expect=3e-97]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=297, Expect=4e-94]; ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=296, Expect=6e-94]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=296, Expect=1e-93]; ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=296, Expect=4e-94]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=295, Expect=5e-93]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=318, Expect=4e-102]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=328, Expect=1e-105]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=314, Expect=6e-101]} {Smed: dd_Smed_v6_23922_0_1, dd_Smed_v6_23922_0_1, [RH, Score=519, Expect=1e-179]} {RNA1310_28316} {RNA815_27364}

Mlig455_008207 {REF} {Length: 2271} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=187.2]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=153.2]} {Human: ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=268, Expect=5e-83]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=268, Expect=5e-83]; ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=267, Expect=4e-83]; ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=265, Expect=2e-82]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=264, Expect=1e-81]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=264, Expect=2e-81]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=263, Expect=3e-81]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=261, Expect=1e-80]; ENSG00000101204, CHRNA4, cholinergic receptor nicotinic alpha 4 subunit, [Score=256, Expect=2e-77]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=279, Expect=2e-87]; ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [Score=268, Expect=7e-83]; ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=267, Expect=2e-83]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=293, Expect=2e-92]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=280, Expect=5e-88]} {Smed: dd_Smed_v6_23922_0_1, dd_Smed_v6_23922_0_1, [Score=477, Expect=1e-163]} {RNA1310_43032} {RNA815_32353}
4. MligTC455_04375 4 0.08 Mlig455_045406

Neo: -

Age: -

 0.967 - 0.967 - - - - Mlig455_045406 {REF} {Length: 558} {NoTransDecoderORF} {RNA1310_51694} {RNA815_31782}
5. MligTC455_10489 10 0.22 Mlig455_007844

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.412

 0.959 - 0.959 - - - - Mlig455_007844 {REF} {Length: 2942} {RNA1509_23232, RNA1509_37544, RNA1509_40152} {RNA1310_2784.1, RNA1509_23232, RNA1509_37544, RNA1509_40152} {RNA1509_23232, RNA1509_37544, RNA1509_40152, RNA815_6667}
6. MligTC455_31327 13 0.28 Mlig455_060738

Neo: -

Age: -

 0.955 - 0.955 - - - - Mlig455_060738 {REF} {Length: 93} {NoTransDecoderORF} {RNA1509_31401} {RNA1310_33397} {RNA815_7477.1}

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