TomoSeq data search

Data search

Results for MligTC455_09213

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_09213	84	1.74	Mlig455_044937	Neo: Int S/G2/M Age: Up-Down-Down	SCAMP1	Mlig455_044937 {REF} {Length: 3848} {Pfam: SCAMP family [PF04144.15, score=196.1]} {Human: ENSG00000085365, SCAMP1, secretory carrier membrane protein 1, [Score=258, Expect=2e-83]} {Mouse: ENSMUSG00000021687, Scamp1, secretory carrier membrane protein 1, [Score=257, Expect=3e-83]} {Dmel: FBgn0040285, Scamp, [Score=239, Expect=3e-76]} {Celegans: WBGene00004743, scm-1, Secretory carrier-associated membrane protein, [Score=183, Expect=8e-55]} {Smed: dd_Smed_v6_2473_0_1, dd_Smed_v6_2473_0_1, [Score=227, Expect=4e-72]} {RNA1509_23779} {RNA1310_26384} {RNA815_13876}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_09213

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-3.86	1.955	0.48264	1.00000
RegionR2	0.166	1.955	0.80671	1.00000
RegionR3	-1.872	1.955	0.99900	1.00000
RegionR4	1.265	1.955	0.25143	0.55100
RegionR5	1.674	1.955	0.03037	0.13062
RegionR6	-0.097	1.955	0.88631	1.00000
RegionR7	1.701	1.955	0.16907	0.75718
RegionR8	1.023	1.955	0.54452	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.432	1.955	0.99995	1.00000
RegenerationR2	0.238	1.955	0.75210	0.97401
RegenerationR3	2.381	1.955	0.01694	0.23787
RegenerationR4	-1.061	1.955	0.18702	0.62937
RegenerationR5	0.079	1.955	0.90066	1.00000
RegenerationR6	0.376	1.955	0.67719	0.91258
RegenerationBL	-2.341	1.955	0.15082	0.46410
RegenerationTP	-1.188	1.955	0.37803	0.81333

Genes with expression patterns similar to MligTC455_09213

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_09213	84	1.74	Mlig455_044937	Neo: Int S/G2/M Age: Up-Down-Down	SCAMP1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_044937 {REF} {Length: 3848} {Pfam: SCAMP family [PF04144.15, score=196.1]} {Human: ENSG00000085365, SCAMP1, secretory carrier membrane protein 1, [Score=258, Expect=2e-83]} {Mouse: ENSMUSG00000021687, Scamp1, secretory carrier membrane protein 1, [Score=257, Expect=3e-83]} {Dmel: FBgn0040285, Scamp, [Score=239, Expect=3e-76]} {Celegans: WBGene00004743, scm-1, Secretory carrier-associated membrane protein, [Score=183, Expect=8e-55]} {Smed: dd_Smed_v6_2473_0_1, dd_Smed_v6_2473_0_1, [Score=227, Expect=4e-72]} {RNA1509_23779} {RNA1310_26384} {RNA815_13876}
2.	MligTC455_38093	192	4	Mlig455_055211, Mlig455_055258, Mlig455_055303	Neo: - Age: -	SEL1L2	0.956	-	-	-	-	0.956	-	Mlig455_055211 {REF} {Length: 5407} {TRANSSPLICED} {Pfam: Sel1 repeat [PF08238.14, score=95.1]; Tetratricopeptide repeat [PF07719.19, score=45.5]; MYND finger [PF01753.20, score=38.2]; Tetratricopeptide repeat [PF13432.8, score=31.7]; Tetratricopeptide repeat [PF00515.30, score=30.7]; Tetratricopeptide repeat [PF13428.8, score=25.7]; TPR repeat [PF13414.8, score=24.8]; Tetratricopeptide repeat [PF13181.8, score=20.3]} {Human: ENSG00000101251, SEL1L2, SEL1L2, ERAD E3 ligase adaptor subunit, [Score=66.2, Expect=2e-10]} {Mouse: ENSMUSG00000074764, Sel1l2, sel-1 suppressor of lin-12-like 2 (C. elegans), [Score=62.4, Expect=2e-09]; ENSMUSG00000039615, Stub1, STIP1 homology and U-Box containing protein 1, [Score=62.4, Expect=8e-10]; ENSMUSG00000024966, Stip1, stress-induced phosphoprotein 1, [Score=62.4, Expect=2e-09]} {Dmel: FBgn0027052, STUB1, STIP1 homology and U-box containing protein 1, [Score=63.2, Expect=2e-10]} {Celegans: WBGene00004759, sel-1, SEL-1; Suppressor/Enhancer of Lin-12, [Score=59.3, Expect=1e-08]} {Smed: dd_Smed_v6_1986_0_1, dd_Smed_v6_1986_0_1, [Score=63.9, Expect=2e-10]} {RNA1509_29799} {RNA1310_4230} {RNA815_4535} Mlig455_055258 {REF} {Length: 5103} {TRANSSPLICED} {Pfam: Sel1 repeat [PF08238.14, score=96.8]; Tetratricopeptide repeat [PF07719.19, score=44.2]; MYND finger [PF01753.20, score=36.2]; Tetratricopeptide repeat [PF13432.8, score=33.2]; TPR repeat [PF13414.8, score=28.4]; Tetratricopeptide repeat [PF00515.30, score=28.3]; Tetratricopeptide repeat [PF13428.8, score=21.6]; Tetratricopeptide repeat [PF13181.8, score=20.8]} {Human: ENSG00000101251, SEL1L2, SEL1L2, ERAD E3 ligase adaptor subunit, [Score=66.6, Expect=1e-10]} {Mouse: ENSMUSG00000024966, Stip1, stress-induced phosphoprotein 1, [Score=62.4, Expect=2e-09]; ENSMUSG00000074764, Sel1l2, sel-1 suppressor of lin-12-like 2 (C. elegans), [Score=62.4, Expect=2e-09]; ENSMUSG00000039615, Stub1, STIP1 homology and U-Box containing protein 1, [Score=62.4, Expect=8e-10]} {Dmel: FBgn0027052, STUB1, STIP1 homology and U-box containing protein 1, [Score=63.2, Expect=3e-10]} {Celegans: WBGene00004759, sel-1, SEL-1; Suppressor/Enhancer of Lin-12, [Score=60.1, Expect=6e-09]} {Smed: dd_Smed_v6_1986_0_1, dd_Smed_v6_1986_0_1, [Score=64.3, Expect=2e-10]} {RNA1509_29799} {RNA1310_4230} {RNA815_4535} Mlig455_055303 {REF} {Length: 5091} {TRANSSPLICED} {Pfam: Sel1 repeat [PF08238.14, score=96.8]; Tetratricopeptide repeat [PF07719.19, score=45.3]; MYND finger [PF01753.20, score=36.2]; Tetratricopeptide repeat [PF13432.8, score=32.9]; Tetratricopeptide repeat [PF00515.30, score=29.4]; TPR repeat [PF13414.8, score=25.7]; Tetratricopeptide repeat [PF13181.8, score=21.9]; Tetratricopeptide repeat [PF13428.8, score=21.8]} {Human: ENSG00000101251, SEL1L2, SEL1L2, ERAD E3 ligase adaptor subunit, [Score=66.6, Expect=1e-10]} {Mouse: ENSMUSG00000074764, Sel1l2, sel-1 suppressor of lin-12-like 2 (C. elegans), [Score=62.8, Expect=2e-09]; ENSMUSG00000024966, Stip1, stress-induced phosphoprotein 1, [Score=62.4, Expect=2e-09]; ENSMUSG00000039615, Stub1, STIP1 homology and U-Box containing protein 1, [Score=62.0, Expect=8e-10]} {Dmel: FBgn0027052, STUB1, STIP1 homology and U-box containing protein 1, [Score=63.2, Expect=2e-10]} {Celegans: WBGene00004759, sel-1, SEL-1; Suppressor/Enhancer of Lin-12, [Score=59.7, Expect=8e-09]} {Smed: dd_Smed_v6_1986_0_1, dd_Smed_v6_1986_0_1, [Score=63.9, Expect=3e-10]} {RNA1509_29799} {RNA1310_4230, RNA1509_29799} {RNA1509_29799, RNA815_4535}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_09213

1.74

Mlig455_044937

Neo: Int S/G2/M

Age: Up-Down-Down

SCAMP1

1.000

MligTC455_38093

192

Mlig455_055211, Mlig455_055258, Mlig455_055303

Neo: -

Age: -

SEL1L2

0.956

Mlig455_055211 {REF} {Length: 5407} {TRANSSPLICED} {Pfam: Sel1 repeat [PF08238.14, score=95.1]; Tetratricopeptide repeat [PF07719.19, score=45.5]; MYND finger [PF01753.20, score=38.2]; Tetratricopeptide repeat [PF13432.8, score=31.7]; Tetratricopeptide repeat [PF00515.30, score=30.7]; Tetratricopeptide repeat [PF13428.8, score=25.7]; TPR repeat [PF13414.8, score=24.8]; Tetratricopeptide repeat [PF13181.8, score=20.3]} {Human: ENSG00000101251, SEL1L2, SEL1L2, ERAD E3 ligase adaptor subunit, [Score=66.2, Expect=2e-10]} {Mouse: ENSMUSG00000074764, Sel1l2, sel-1 suppressor of lin-12-like 2 (C. elegans), [Score=62.4, Expect=2e-09]; ENSMUSG00000039615, Stub1, STIP1 homology and U-Box containing protein 1, [Score=62.4, Expect=8e-10]; ENSMUSG00000024966, Stip1, stress-induced phosphoprotein 1, [Score=62.4, Expect=2e-09]} {Dmel: FBgn0027052, STUB1, STIP1 homology and U-box containing protein 1, [Score=63.2, Expect=2e-10]} {Celegans: WBGene00004759, sel-1, SEL-1; Suppressor/Enhancer of Lin-12, [Score=59.3, Expect=1e-08]} {Smed: dd_Smed_v6_1986_0_1, dd_Smed_v6_1986_0_1, [Score=63.9, Expect=2e-10]} {RNA1509_29799} {RNA1310_4230} {RNA815_4535}

Mlig455_055258 {REF} {Length: 5103} {TRANSSPLICED} {Pfam: Sel1 repeat [PF08238.14, score=96.8]; Tetratricopeptide repeat [PF07719.19, score=44.2]; MYND finger [PF01753.20, score=36.2]; Tetratricopeptide repeat [PF13432.8, score=33.2]; TPR repeat [PF13414.8, score=28.4]; Tetratricopeptide repeat [PF00515.30, score=28.3]; Tetratricopeptide repeat [PF13428.8, score=21.6]; Tetratricopeptide repeat [PF13181.8, score=20.8]} {Human: ENSG00000101251, SEL1L2, SEL1L2, ERAD E3 ligase adaptor subunit, [Score=66.6, Expect=1e-10]} {Mouse: ENSMUSG00000024966, Stip1, stress-induced phosphoprotein 1, [Score=62.4, Expect=2e-09]; ENSMUSG00000074764, Sel1l2, sel-1 suppressor of lin-12-like 2 (C. elegans), [Score=62.4, Expect=2e-09]; ENSMUSG00000039615, Stub1, STIP1 homology and U-Box containing protein 1, [Score=62.4, Expect=8e-10]} {Dmel: FBgn0027052, STUB1, STIP1 homology and U-box containing protein 1, [Score=63.2, Expect=3e-10]} {Celegans: WBGene00004759, sel-1, SEL-1; Suppressor/Enhancer of Lin-12, [Score=60.1, Expect=6e-09]} {Smed: dd_Smed_v6_1986_0_1, dd_Smed_v6_1986_0_1, [Score=64.3, Expect=2e-10]} {RNA1509_29799} {RNA1310_4230} {RNA815_4535}

Mlig455_055303 {REF} {Length: 5091} {TRANSSPLICED} {Pfam: Sel1 repeat [PF08238.14, score=96.8]; Tetratricopeptide repeat [PF07719.19, score=45.3]; MYND finger [PF01753.20, score=36.2]; Tetratricopeptide repeat [PF13432.8, score=32.9]; Tetratricopeptide repeat [PF00515.30, score=29.4]; TPR repeat [PF13414.8, score=25.7]; Tetratricopeptide repeat [PF13181.8, score=21.9]; Tetratricopeptide repeat [PF13428.8, score=21.8]} {Human: ENSG00000101251, SEL1L2, SEL1L2, ERAD E3 ligase adaptor subunit, [Score=66.6, Expect=1e-10]} {Mouse: ENSMUSG00000074764, Sel1l2, sel-1 suppressor of lin-12-like 2 (C. elegans), [Score=62.8, Expect=2e-09]; ENSMUSG00000024966, Stip1, stress-induced phosphoprotein 1, [Score=62.4, Expect=2e-09]; ENSMUSG00000039615, Stub1, STIP1 homology and U-Box containing protein 1, [Score=62.0, Expect=8e-10]} {Dmel: FBgn0027052, STUB1, STIP1 homology and U-box containing protein 1, [Score=63.2, Expect=2e-10]} {Celegans: WBGene00004759, sel-1, SEL-1; Suppressor/Enhancer of Lin-12, [Score=59.7, Expect=8e-09]} {Smed: dd_Smed_v6_1986_0_1, dd_Smed_v6_1986_0_1, [Score=63.9, Expect=3e-10]} {RNA1509_29799} {RNA1310_4230, RNA1509_29799} {RNA1509_29799, RNA815_4535}