M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_09578

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_09578 18 0.38 Mlig455_039762

Neo: -

Age: -

 Mlig455_039762 {REF} {Length: 733} {NoTransDecoderORF} {RNA1509_56890} {RNA1310_103114, RNA1509_56890} {RNA1509_56890, RNA815_30938}

Cumulative graph for MligTC455_09578

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.851 0.856 0.99988 1.00000
RegionR2 -0.197 0.856 0.62272 0.96613
RegionR3 1.269 0.856 0.27103 0.81521
RegionR4 2.031 0.856 0.99978 1.00000
RegionR5 0.248 0.856 0.99986 1.00000
RegionR6 -1.186 0.856 0.99986 1.00000
RegionR7 -1.137 0.856 0.99990 1.00000
RegionR8 -0.177 0.856 0.99988 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.427 0.856 1.00000 1.00000
RegenerationR2 0.529 0.856 0.66116 0.94205
RegenerationR3 -0.484 0.856 0.64473 0.92663
RegenerationR4 0.798 0.856 0.35345 0.78270
RegenerationR5 1.402 0.856 0.27121 0.70263
RegenerationR6 2.602 0.856 0.21675 0.56087
RegenerationBL 2.199 0.856 0.28902 0.65096
RegenerationTP -1.421 0.856 0.99996 1.00000


Genes with expression patterns similar to MligTC455_09578

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_09578 18 0.38 Mlig455_039762

Neo: -

Age: -

 3 - - - 1.000 1.000 1.000 Mlig455_039762 {REF} {Length: 733} {NoTransDecoderORF} {RNA1509_56890} {RNA1310_103114, RNA1509_56890} {RNA1509_56890, RNA815_30938}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA