Data search
Results for MligTC455_09801
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_09801 | 91 | 1.90 | Mlig455_041397, Mlig455_069363 | Neo: - Age: - |
Mlig455_041397 {REF} {Length: 1300} {RNA1509_59456} {RNA1310_41294} {RNA815_48953} Mlig455_069363 {REF} {Length: 224} {NoTransDecoderORF} |
Cumulative graph for MligTC455_09801
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -3.342 | 1.93 | 0.99987 | 1.00000 | |
| RegionR2 | -1.636 | 1.93 | 0.92324 | 1.00000 | |
| RegionR3 | 0.715 | 1.93 | 0.51403 | 1.00000 | |
| RegionR4 | 3.279 | 1.93 | 0.05838 | 0.21409 | |
| RegionR5 | 3.097 | 1.93 | 0.01695 | 0.08581 | |
| RegionR6 | -2.387 | 1.93 | 0.99988 | 1.00000 | |
| RegionR7 | 1.686 | 1.93 | 0.28369 | 0.91685 | |
| RegionR8 | -1.413 | 1.93 | 0.99956 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.445 | 1.93 | 1.00000 | 1.00000 | |
| RegenerationR2 | 3.053 | 1.93 | 0.01471 | 0.19833 | |
| RegenerationR3 | 1.398 | 1.93 | 0.29548 | 0.72686 | |
| RegenerationR4 | 0.219 | 1.93 | 0.84970 | 1.00000 | |
| RegenerationR5 | 0.376 | 1.93 | 0.95928 | 1.00000 | |
| RegenerationR6 | 4.4 | 1.93 | 0.02406 | 0.19292 | |
| RegenerationBL | 1.46 | 1.93 | 0.34186 | 0.70844 | |
| RegenerationTP | 1.768 | 1.93 | 0.48594 | 0.89258 |
Genes with expression patterns similar to MligTC455_09801
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_09801 | 91 | 1.9 | Mlig455_041397, Mlig455_069363 | Neo: - Age: - |
4 | - | - | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_041397 {REF} {Length: 1300} {RNA1509_59456} {RNA1310_41294} {RNA815_48953} Mlig455_069363 {REF} {Length: 224} {NoTransDecoderORF} |
|
| 2. | MligTC455_05534 | 53 | 1.09 | Mlig455_022209 | Neo: - Age: - |
0.982 | - | - | - | - | - | 0.982 | Mlig455_022209 {REF} {Length: 1138} {NoTransDecoderORF} {RNA1509_30535, RNA1509_33187} {RNA1310_15716.1, RNA1509_30535} {RNA1509_30535, RNA815_44681} | |
| 3. | MligTC455_26260 | 281 | 5.86 | Mlig455_033712 | Neo: - Age: Up-Down-Down |
0.979 | - | - | - | - | - | 0.979 | Mlig455_033712 {REF} {Length: 4818} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=21.8]} {RNA1509_26340} {RNA1310_17276.1} {RNA815_2054.1} | |
| 4. | MligTC455_27066 | 95 | 1.99 | Mlig455_008802 | Neo: - Age: - |
0.958 | - | - | - | - | - | 0.958 | Mlig455_008802 {REF} {Length: 1551} {NoTransDecoderORF} {RNA1509_44223} {RNA1310_54802} {RNA815_64986} | |
| 5. | MligTC455_31899 | 54 | 1.12 | Mlig455_038388 | Neo: - Age: logFC(26M/2M)=-0.361 |
0.957 | - | - | - | - | - | 0.957 | Mlig455_038388 {REF} {Length: 5705} {Mouse: ENSMUSG00000034156, Tspoap1, TSPO associated protein 1, [Score=57.4, Expect=5e-08]} {Smed: dd_Smed_v6_9824_0_1, dd_Smed_v6_9824_0_1, [Score=60.5, Expect=2e-09]} {RNA1509_50962} {RNA1310_2550.1} {RNA815_706} | |
| 6. | MligTC455_28314 | 301 | 6.27 | Mlig455_041681, Mlig455_070191 | Neo: - Age: - |
0.953 | - | - | - | - | - | 0.953 | Mlig455_041681 {REF} {Length: 5292} {Pfam: Adenovirus late L2 mu core protein (Protein X) [PF05829.14, score=23.6]} {RNA1509_28643} {RNA1310_576.1} {RNA815_2733.1} Mlig455_070191 {REF} {Length: 961} {Pfam: Integrase core domain [PF00665.28, score=28.3]} {Smed: dd_Smed_v6_11155_0_1, dd_Smed_v6_11155_0_1, [Score=59.3, Expect=7e-11]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1} |
Berezikov Lab - 2020-2021 © ERIBA