M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_09917

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_09917 32 0.67 Mlig455_044172

Neo: -

Age: -

 SLC24A3 Mlig455_044172 {REF} {Length: 2760} {Pfam: Sodium/calcium exchanger protein [PF01699.26, score=165.1]} {Human: ENSG00000185052, SLC24A3, solute carrier family 24 member 3, [Score=273, Expect=3e-82]; ENSG00000155886, SLC24A2, solute carrier family 24 member 2, [Score=262, Expect=3e-78]} {Mouse: ENSMUSG00000037996, Slc24a2, solute carrier family 24 (sodium/potassium/calcium exchanger), member 2, [Score=270, Expect=6e-81]; ENSMUSG00000063873, Slc24a3, solute carrier family 24 (sodium/potassium/calcium exchanger), member 3, [Score=268, Expect=6e-81]} {Dmel: FBgn0028704, Nckx30C, [Score=248, Expect=1e-71]} {Celegans: WBGene00003569, ncx-4, Na/Ca eXchangers, [Score=142, Expect=7e-36]} {Smed: dd_Smed_v6_9736_0_1, dd_Smed_v6_9736_0_1, [Score=285, Expect=7e-88]} {RNA1310_23810} {RNA815_17580}

Cumulative graph for MligTC455_09917

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 11.168 1.116 0.99993 1.00000
RegionR2 -3.613 1.116 0.98393 1.00000
RegionR3 -4.338 1.116 0.99976 1.00000
RegionR4 5.12 1.116 0.99956 1.00000
RegionR5 0.268 1.116 0.31301 0.65201
RegionR6 -0.226 1.116 0.77567 1.00000
RegionR7 -4.303 1.116 0.99954 1.00000
RegionR8 -4.076 1.116 0.99954 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -11.428 1.116 0.99990 1.00000
RegenerationR2 0.972 1.116 0.19035 0.63415
RegenerationR3 -0.974 1.116 0.84638 0.99680
RegenerationR4 -3.133 1.116 0.90046 1.00000
RegenerationR5 -2.362 1.116 0.01769 0.23163
RegenerationR6 -2.382 1.116 0.00562 0.09093
RegenerationBL -3.267 1.116 0.99981 1.00000
RegenerationTP -0.487 1.116 0.87647 1.00000


Genes with expression patterns similar to MligTC455_09917

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_09917 32 0.67 Mlig455_044172

Neo: -

Age: -

 SLC24A3 3 1.000 - - 1.000 1.000 - Mlig455_044172 {REF} {Length: 2760} {Pfam: Sodium/calcium exchanger protein [PF01699.26, score=165.1]} {Human: ENSG00000185052, SLC24A3, solute carrier family 24 member 3, [Score=273, Expect=3e-82]; ENSG00000155886, SLC24A2, solute carrier family 24 member 2, [Score=262, Expect=3e-78]} {Mouse: ENSMUSG00000037996, Slc24a2, solute carrier family 24 (sodium/potassium/calcium exchanger), member 2, [Score=270, Expect=6e-81]; ENSMUSG00000063873, Slc24a3, solute carrier family 24 (sodium/potassium/calcium exchanger), member 3, [Score=268, Expect=6e-81]} {Dmel: FBgn0028704, Nckx30C, [Score=248, Expect=1e-71]} {Celegans: WBGene00003569, ncx-4, Na/Ca eXchangers, [Score=142, Expect=7e-36]} {Smed: dd_Smed_v6_9736_0_1, dd_Smed_v6_9736_0_1, [Score=285, Expect=7e-88]} {RNA1310_23810} {RNA815_17580}
2. MligTC455_50067 66 1.38 Mlig455_053514

Neo: -

Age: logFC(26M/2M)=-0.733

 1.784 0.825 - - - 0.959 - Mlig455_053514 {REF} {Length: 2509} {RNA1509_46424} {RNA1310_8850} {RNA815_3382.1}
3. MligTC455_38838 24 0.49 Mlig455_033571, Mlig455_067059

Neo: -

Age: -

 1.687 - - - 0.958 0.729 -

Mlig455_033571 {REF} {Length: 1596} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=62.5]; Capsular polysaccharide synthesis protein [PF05704.14, score=18.7]} {Smed: dd_Smed_v6_42389_0_1, dd_Smed_v6_42389_0_1, [RH, Score=144, Expect=1e-39]} {RNA1310_19511} {RNA815_7578}

Mlig455_067059 {REF} {Length: 1559} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=62.5]; Capsular polysaccharide synthesis protein [PF05704.14, score=18.7]} {Smed: dd_Smed_v6_42389_0_1, dd_Smed_v6_42389_0_1, [RH, Score=144, Expect=1e-39]} {RNA1310_19511} {RNA815_7578}
4. MligTC455_29618 4 0.09 Mlig455_062489

Neo: -

Age: -

 0.996 - - - 0.996 - - Mlig455_062489 {REF} {Length: 1382} {NoTransDecoderORF} {RNA1310_81883}
5. MligTC455_02622 18 0.38 Mlig455_034646, Mlig455_062629

Neo: -

Age: -

 CACNG5 0.995 - - - 0.995 - -

Mlig455_034646 {REF} {Length: 1447} {Pfam: PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=49.4]; PMP-22/EMP/MP20/Claudin family [PF00822.22, score=36.5]} {Human: ENSG00000075429, CACNG5, calcium voltage-gated channel auxiliary subunit gamma 5, [Score=73.2, Expect=3e-14]} {Mouse: ENSMUSG00000040373, Cacng5, calcium channel, voltage-dependent, gamma subunit 5, [Score=72.4, Expect=4e-14]} {RNA1310_115007} {RNA815_41269}

Mlig455_062629 {REF} {Length: 1628} {Pfam: PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=49.4]; PMP-22/EMP/MP20/Claudin family [PF00822.22, score=36.5]} {Human: ENSG00000075429, CACNG5, calcium voltage-gated channel auxiliary subunit gamma 5, [Score=73.2, Expect=3e-14]} {Mouse: ENSMUSG00000040373, Cacng5, calcium channel, voltage-dependent, gamma subunit 5, [Score=72.4, Expect=4e-14]} {RNA1310_115007} {RNA815_41269}
6. MligTC455_10770 9 0.19 Mlig455_069191

Neo: -

Age: -

 NEFM 0.994 - - - 0.994 - - Mlig455_069191 {REF} {Length: 2284} {Human: ENSG00000104722, NEFM, neurofilament medium, [Score=50.8, Expect=6e-06]}
7. MligTC455_23806 3 0.06 Mlig455_006205

Neo: -

Age: Down-Down-Up

 0.994 - - - 0.994 - - Mlig455_006205 {REF} {Length: 2517} {Pfam: Pacifastin inhibitor (LCMII) [PF05375.15, score=21.2]} {RNA1509_46843} {RNA1310_49496} {RNA815_41042}
8. MligTC455_27231 12 0.25 Mlig455_013442

Neo: -

Age: -

 SSTR4 0.994 - - - 0.994 - - Mlig455_013442 {REF} {Length: 1942} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=70.6]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=25.7]} {Human: ENSG00000132671, SSTR4, somatostatin receptor 4, [Score=63.2, Expect=4e-10]} {Mouse: ENSMUSG00000037014, Sstr4, somatostatin receptor 4, [Score=72.8, Expect=2e-13]} {Dmel: FBgn0039396, CCAP-R, Crustacean cardioactive peptide receptor, [Score=60.5, Expect=2e-09]} {Celegans: WBGene00009619, npr-6, NeuroPeptide Receptor family, [Score=50.8, Expect=1e-06]} {Smed: dd_Smed_v6_3522_0_1, dd_Smed_v6_3522_0_1, [Score=123, Expect=1e-31]} {RNA1310_145931}
9. MligTC455_34662 14 0.28 Mlig455_026025

Neo: -

Age: -

 FOXG1 0.993 - - - 0.993 - - Mlig455_026025 {REF} {Length: 2940} {Pfam: Forkhead domain [PF00250.20, score=130.9]} {Human: ENSG00000176165, FOXG1, forkhead box G1, [RH, Score=206, Expect=3e-60]} {Mouse: ENSMUSG00000020950, Foxg1, forkhead box G1, [RH, Score=206, Expect=9e-61]} {Dmel: FBgn0004567, slp2, sloppy paired 2, [RH, Score=215, Expect=1e-64]} {Celegans: WBGene00001434, fkh-2, ForKHead transcription factor family, [RH, Score=186, Expect=9e-56]} {Smed: dd_Smed_v6_16466_0_1, dd_Smed_v6_16466_0_1, [RH, Score=164, Expect=1e-48]} {RNA1509_39072} {RNA1310_98689} {RNA815_51347}
10. MligTC455_14856 14 0.29 Mlig455_023184

Neo: -

Age: -

 ANGPTL7 0.989 - - - 0.989 - - Mlig455_023184 {REF} {Length: 1290} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=129.4]; PAN domain [PF00024.28, score=23.8]} {Human: ENSG00000171819, ANGPTL7, angiopoietin like 7, [Score=105, Expect=1e-25]; ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=103, Expect=3e-24]} {Mouse: ENSMUSG00000028989, Angptl7, angiopoietin-like 7, [Score=104, Expect=1e-25]; ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=102, Expect=4e-24]} {Dmel: FBgn0033312, CG8642, [Score=96.7, Expect=2e-22]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=98.6, Expect=5e-23]} {RNA1509_58115} {RNA1310_36699.1} {RNA815_17918.1}
11. MligTC455_00984 6 0.13 Mlig455_027441

Neo: -

Age: -

 0.986 - - - 0.986 - - Mlig455_027441 {REF} {Length: 318} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_58713} {RNA1310_116650} {RNA815_27019}
12. MligTC455_20335 30 0.62 Mlig455_003579

Neo: -

Age: -

 0.986 - - - 0.986 - - Mlig455_003579 {REF} {Length: 3608} {RNA1310_50785} {RNA815_44116}
13. MligTC455_09283 60 1.24 Mlig455_059359, Mlig455_065577

Neo: -

Age: -

 0.979 0.979 - - - - -

Mlig455_059359 {REF} {Length: 727} {RNA1310_75817} {RNA815_45423}

Mlig455_065577 {REF} {Length: 735} {RNA1310_75817} {RNA815_45423}
14. MligTC455_26004 161 3.34 Mlig455_005523, Mlig455_036228

Neo: -

Age: logFC(26M/2M)=0.483

Region-enriched R2: 3.880/0.02863

 0.977 - - - 0.977 - -

Mlig455_005523 {REF} {Length: 3106} {RNA1509_54312} {RNA1310_125315} {RNA815_31978}

Mlig455_036228 {REF} {Length: 3817} {RNA1509_54312} {RNA1310_75243} {RNA815_31978}
15. MligTC455_14123 49 1.01 Mlig455_004226, Mlig455_031058

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-1.765

 MUC17 0.968 - - - 0.968 - -

Mlig455_004226 {REF} {Length: 15360} {Pfam: Spondin-like TSP1 domain [PF19028.2, score=143.9]; Thrombospondin type 1 domain [PF00090.21, score=83.9]; Trypsin Inhibitor like cysteine rich domain [PF01826.19, score=40.0]} {Human: ENSG00000169876, MUC17, mucin 17, cell surface associated, [Score=86.7, Expect=8e-16]; ENSG00000143341, HMCN1, hemicentin 1, [Score=85.5, Expect=2e-15]} {Mouse: ENSMUSG00000099398, Ms4a14, membrane-spanning 4-domains, subfamily A, member 14, [Score=94.4, Expect=2e-18]} {Dmel: FBgn0026721, fat-spondin, [Score=55.1, Expect=1e-06]} {Celegans: WBGene00006893, spon-1, SPONdin (Extracellular matrix glycoprotein) family, [Score=72.8, Expect=4e-12]} {Smed: dd_Smed_v6_628_0_1, dd_Smed_v6_628_0_1, [RH, Score=419, Expect=8e-124]} {RNA1509_2451} {RNA1310_3554.1} {RNA815_1109}

Mlig455_031058 {REF} {Length: 19314} {Human: ENSG00000169876, MUC17, mucin 17, cell surface associated, [Score=81.3, Expect=4e-14]} {RNA1509_11979, RNA1509_13470, RNA1509_1397, RNA1509_22985, RNA1509_30738, RNA1509_34825, RNA1509_53938, RNA1509_54748, RNA1509_58409, RNA1509_59378, RNA1509_6442, RNA1509_6612} {RNA1310_16813.1, RNA1509_13470, RNA1509_1397, RNA1509_22985, RNA1509_30738, RNA1509_34825, RNA1509_53938, RNA1509_54748, RNA1509_58409, RNA1509_59378, RNA1509_6442, RNA1509_6612} {RNA1509_13470, RNA1509_1397, RNA1509_22985, RNA1509_30738, RNA1509_34825, RNA1509_53938, RNA1509_54748, RNA1509_58409, RNA1509_59378, RNA1509_6442, RNA1509_6612, RNA815_1331}
16. MligTC455_36264 546 11.38 Mlig455_022401

Neo: -

Age: Down-Up-Up

 THG1L 0.968 - - - - 0.968 - Mlig455_022401 {REF} {Length: 2292} {TRANSSPLICED} {Pfam: tRNAHis guanylyltransferase [PF04446.14, score=155.3]; Thg1 C terminal domain [PF14413.8, score=153.0]; Protein kinase domain [PF00069.27, score=126.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=82.0]} {Human: ENSG00000113272, THG1L, tRNA-histidine guanylyltransferase 1 like, [RH, Score=308, Expect=3e-100]} {Mouse: ENSMUSG00000011254, Thg1l, tRNA-histidine guanylyltransferase 1-like (S. cerevisiae), [RH, Score=308, Expect=2e-100]} {Dmel: FBgn0283659, THG, tRNA-histidine guanylyltransferase, [RH, Score=277, Expect=1e-88]} {Celegans: WBGene00008424, D2045.7, [RH, Score=129, Expect=6e-33]} {Smed: dd_Smed_v6_14422_0_2, dd_Smed_v6_14422_0_2, [RH, Score=253, Expect=2e-80]} {RNA1509_22817} {RNA1310_33867.1} {RNA815_2617}
17. MligTC455_15332 44 0.93 Mlig455_062622, Mlig455_067527

Neo: -

Age: -

Region-enriched R2: 7.516/0.00418

 ASIC4 0.967 - - - 0.967 - -

Mlig455_062622 {REF} {Length: 2228} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=73.0]} {Human: ENSG00000072182, ASIC4, acid sensing ion channel subunit family member 4, [Score=47.4, Expect=7e-06]} {Mouse: ENSMUSG00000033007, Asic4, acid-sensing (proton-gated) ion channel family member 4, [Score=51.6, Expect=2e-07]} {Celegans: WBGene00012116, del-4, DEgenerin Like, [Score=55.8, Expect=3e-09]} {Smed: dd_Smed_v6_19727_0_1, dd_Smed_v6_19727_0_1, [Score=53.1, Expect=2e-08]} {RNA1310_17847} {RNA815_27317}

Mlig455_067527 {REF} {Length: 1916} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=147.3]} {Human: ENSG00000072182, ASIC4, acid sensing ion channel subunit family member 4, [Score=50.1, Expect=1e-05]} {Mouse: ENSMUSG00000033007, Asic4, acid-sensing (proton-gated) ion channel family member 4, [Score=50.8, Expect=3e-06]} {Celegans: WBGene00012116, del-4, DEgenerin Like, [Score=54.7, Expect=1e-07]} {Smed: dd_Smed_v6_19727_0_1, dd_Smed_v6_19727_0_1, [Score=53.5, Expect=2e-07]} {RNA1310_17847} {RNA815_27317}
18. MligTC455_22125 178 3.71 Mlig455_028579, Mlig455_028597

Neo: -

Age: -

Region-enriched R2: 5.949/0.00261

 0.966 - - - 0.966 - -

Mlig455_028579 {REF} {Length: 993} {RNA1509_54214} {RNA1310_51652} {RNA815_36975}

Mlig455_028597 {REF} {Length: 962} {RNA1509_54214} {RNA1310_51652} {RNA815_36975}
19. MligTC455_27332 6690 139.38 Mlig455_034839, Mlig455_034841, Mlig455_034842

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=0.609

Region-specific R2: 8.988

Region-enriched R2: 9.169/0.00000

Regeneration-depleted R2: -8.701
Regeneration-depleted R3: -5.339

 0.963 - - - 0.963 - -

Mlig455_034839 {REF} {Length: 551} {RNA1509_2874} {RNA1310_102625.1} {RNA815_20834}

Mlig455_034841 {REF} {Length: 529} {RNA1509_2874} {RNA1310_102625.1, RNA1509_2874} {RNA1509_2874, RNA815_20834}

Mlig455_034842 {REF} {Length: 557} {RNA1509_2874} {RNA1310_102625.1} {RNA815_20834}
20. MligTC455_38584 8 0.17 Mlig455_062200

Neo: -

Age: -

 0.961 - - - - 0.961 - Mlig455_062200 {REF} {Length: 2342} {NoTransDecoderORF} {RNA1509_19235} {RNA1310_101273} {RNA815_16592}
21. MligTC455_46581 31 0.64 Mlig455_042524

Neo: -

Age: -

 0.961 - - - 0.961 - - Mlig455_042524 {REF} {Length: 975} {RNA1509_46101} {RNA1310_32444} {RNA815_42659}
22. MligTC455_01861 30 0.63 Mlig455_046027

Neo: -

Age: -

 0.96 - - - 0.960 - - Mlig455_046027 {REF} {Length: 736} {RNA1310_50531} {RNA815_29422}
23. MligTC455_10840 7 0.15 Mlig455_002922

Neo: -

Age: -

 0.96 - - - 0.960 - - Mlig455_002922 {REF} {Length: 931} {RNA1310_87221} {RNA815_45993}
24. MligTC455_15726 270 5.63 Mlig455_031204

Neo: -

Age: -

Region-enriched R2: 6.820/0.00015

 ADAMTS18 0.96 - - - 0.960 - - Mlig455_031204 {REF} {Length: 2405} {Pfam: Reprolysin (M12B) family zinc metalloprotease [PF01421.21, score=77.6]; Metallo-peptidase family M12 [PF13688.8, score=52.5]; Metallo-peptidase family M12B Reprolysin-like [PF13583.8, score=45.6]; Metallo-peptidase family M12B Reprolysin-like [PF13582.8, score=41.4]; ADAM cysteine-rich domain [PF17771.3, score=40.0]; Metallo-peptidase family M12B Reprolysin-like [PF13574.8, score=30.9]; Astacin (Peptidase family M12A) [PF01400.26, score=19.3]} {Human: ENSG00000140873, ADAMTS18, ADAM metallopeptidase with thrombospondin type 1 motif 18, [Score=90.9, Expect=1e-18]} {Mouse: ENSMUSG00000049538, Adamts16, a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 16, [Score=90.1, Expect=1e-18]; ENSMUSG00000053399, Adamts18, a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18, [Score=89.7, Expect=2e-18]} {Dmel: FBgn0034903, sona, sol narae, [RH, Score=114, Expect=7e-27]} {Celegans: WBGene00003248, mig-17, ADAM family mig-17, [RH, Score=100, Expect=2e-22]} {RNA1509_42775} {RNA1310_19585.1, RNA1509_42775} {RNA1509_42775, RNA815_17997}
25. MligTC455_18583 12 0.24 Mlig455_045246

Neo: -

Age: -

 0.96 - - - 0.960 - - Mlig455_045246 {REF} {Length: 719}
26. MligTC455_19578 23 0.47 Mlig455_018093, Mlig455_059526

Neo: -

Age: -

 0.96 - - - 0.960 - -

Mlig455_018093 {REF} {Length: 2450} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=99.2]} {Smed: dd_Smed_v6_21491_0_1, dd_Smed_v6_21491_0_1, [Score=72.4, Expect=4e-13]} {RNA1310_65251}

Mlig455_059526 {REF} {Length: 2621} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=101.4]} {Smed: dd_Smed_v6_21491_0_1, dd_Smed_v6_21491_0_1, [Score=74.7, Expect=8e-14]} {RNA1310_65251}
27. MligTC455_21415 38 0.78 Mlig455_030394, Mlig455_069019

Neo: -

Age: Up-Down-Down

 SCN5A 0.96 - - - 0.960 - -

Mlig455_030394 {REF} {Length: 6394} {Pfam: Ion transport protein [PF00520.33, score=542.0]; Polycystin cation channel [PF08016.14, score=81.1]; Voltage-dependent L-type calcium channel, IQ-associated [PF16905.7, score=26.0]} {Human: ENSG00000183873, SCN5A, sodium voltage-gated channel alpha subunit 5, [RH, Score=944, Expect=0.0]; ENSG00000185313, SCN10A, sodium voltage-gated channel alpha subunit 10, [RH, Score=910, Expect=0.0]} {Mouse: ENSMUSG00000032511, Scn5a, sodium channel, voltage-gated, type V, alpha, [RH, Score=942, Expect=0.0]; ENSMUSG00000001027, Scn4a, sodium channel, voltage-gated, type IV, alpha, [RH, Score=932, Expect=0.0]; ENSMUSG00000023033, Scn8a, sodium channel, voltage-gated, type VIII, alpha, [RH, Score=924, Expect=0.0]} {Dmel: FBgn0085434, NaCP60E, Na channel protein 60E, [RH, Score=896, Expect=0.0]} {Celegans: WBGene00001187, egl-19, Voltage-dependent L-type calcium channel subunit alpha, [Score=322, Expect=2e-90]} {Smed: dd_Smed_v6_12243_0_1, dd_Smed_v6_12243_0_1, [Score=1238, Expect=0.0]} {RNA1509_26911} {RNA1310_25124} {RNA815_23541}

Mlig455_069019 {REF} {Length: 6623} {Pfam: Ion transport protein [PF00520.33, score=774.7]; Polycystin cation channel [PF08016.14, score=76.9]; Voltage-dependent L-type calcium channel, IQ-associated [PF16905.7, score=25.2]} {Human: ENSG00000183873, SCN5A, sodium voltage-gated channel alpha subunit 5, [RH, Score=1268, Expect=0.0]; ENSG00000185313, SCN10A, sodium voltage-gated channel alpha subunit 10, [RH, Score=1214, Expect=0.0]} {Mouse: ENSMUSG00000032511, Scn5a, sodium channel, voltage-gated, type V, alpha, [RH, Score=1276, Expect=0.0]} {Dmel: FBgn0085434, NaCP60E, Na channel protein 60E, [RH, Score=899, Expect=0.0]} {Celegans: WBGene00001187, egl-19, Voltage-dependent L-type calcium channel subunit alpha, [Score=322, Expect=9e-89]} {Smed: dd_Smed_v6_12243_0_1, dd_Smed_v6_12243_0_1, [Score=1233, Expect=0.0]} {RNA1509_26911} {RNA1310_25124} {RNA815_23541}
28. MligTC455_22323 68 1.42 Mlig455_000713, Mlig455_000766

Neo: -

Age: -

 HCN4 0.96 - - - 0.960 - -

Mlig455_000713 {REF} {Length: 3555} {Pfam: Ion transport protein N-terminal [PF08412.12, score=83.6]; Cyclic nucleotide-binding domain [PF00027.31, score=70.8]; Ion transport protein [PF00520.33, score=62.7]} {Human: ENSG00000138622, HCN4, hyperpolarization activated cyclic nucleotide gated potassium channel 4, [Score=581, Expect=0.0]; ENSG00000099822, HCN2, hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2, [Score=568, Expect=0.0]} {Mouse: ENSMUSG00000032338, Hcn4, hyperpolarization-activated, cyclic nucleotide-gated K+ 4, [Score=579, Expect=0.0]; ENSMUSG00000020331, Hcn2, hyperpolarization-activated, cyclic nucleotide-gated K+ 2, [Score=563, Expect=0.0]} {Dmel: FBgn0263397, Ih, I[[h]] channel, [RH, Score=512, Expect=1e-161]} {Celegans: WBGene00006526, tax-4, Cyclic nucleotide-gated cation channel, [Score=133, Expect=8e-32]} {Smed: dd_Smed_v6_16523_0_1, dd_Smed_v6_16523_0_1, [Score=859, Expect=0.0]} {RNA1509_59211} {RNA1310_33761} {RNA815_15561.1}

Mlig455_000766 {REF} {Length: 4037} {Pfam: Ion transport protein N-terminal [PF08412.12, score=83.5]; Cyclic nucleotide-binding domain [PF00027.31, score=70.7]; Ion transport protein [PF00520.33, score=62.6]} {Human: ENSG00000138622, HCN4, hyperpolarization activated cyclic nucleotide gated potassium channel 4, [Score=566, Expect=0.0]; ENSG00000099822, HCN2, hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2, [Score=553, Expect=0.0]} {Mouse: ENSMUSG00000032338, Hcn4, hyperpolarization-activated, cyclic nucleotide-gated K+ 4, [Score=564, Expect=0.0]; ENSMUSG00000020331, Hcn2, hyperpolarization-activated, cyclic nucleotide-gated K+ 2, [Score=548, Expect=3e-180]} {Dmel: FBgn0263397, Ih, I[[h]] channel, [Score=502, Expect=4e-166]} {Celegans: WBGene00006526, tax-4, Cyclic nucleotide-gated cation channel, [Score=133, Expect=8e-32]} {Smed: dd_Smed_v6_16523_0_1, dd_Smed_v6_16523_0_1, [Score=844, Expect=0.0]} {RNA1509_59211} {RNA1310_33761} {RNA815_15561.1}
29. MligTC455_32432 118 2.46 Mlig455_014378

Neo: -

Age: -

 0.96 - - - 0.960 - - Mlig455_014378 {REF} {Length: 1456} {TRANSSPLICED} {RNA1509_58713} {RNA1310_36304} {RNA815_14805}
30. MligTC455_43085 7 0.14 Mlig455_035380

Neo: -

Age: -

Region-enriched R4: 3.349/0.01204

 0.96 - - - 0.960 - - Mlig455_035380 {REF} {Length: 1093} {Pfam: Lectin C-type domain [PF00059.23, score=30.6]} {RNA1509_45080} {RNA1310_133134}
31. MligTC455_50410 31 0.64 Mlig455_020239

Neo: -

Age: -

 GRIA2 0.96 - - - 0.960 - - Mlig455_020239 {REF} {Length: 2096} {Pfam: Ligand-gated ion channel [PF00060.28, score=192.2]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=127.8]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=91.1]} {Human: ENSG00000120251, GRIA2, glutamate ionotropic receptor AMPA type subunit 2, [Score=513, Expect=7e-173]; ENSG00000152578, GRIA4, glutamate ionotropic receptor AMPA type subunit 4, [Score=496, Expect=3e-166]; ENSG00000155511, GRIA1, glutamate ionotropic receptor AMPA type subunit 1, [Score=494, Expect=8e-167]; ENSG00000125675, GRIA3, glutamate ionotropic receptor AMPA type subunit 3, [Score=491, Expect=1e-164]} {Mouse: ENSMUSG00000033981, Gria2, glutamate receptor, ionotropic, AMPA2 (alpha 2), [Score=507, Expect=4e-171]; ENSMUSG00000025892, Gria4, glutamate receptor, ionotropic, AMPA4 (alpha 4), [Score=497, Expect=4e-167]; ENSMUSG00000020524, Gria1, glutamate receptor, ionotropic, AMPA1 (alpha 1), [Score=494, Expect=1e-165]; ENSMUSG00000001986, Gria3, glutamate receptor, ionotropic, AMPA3 (alpha 3), [Score=491, Expect=1e-164]} {Dmel: FBgn0038837, CG3822, [Score=432, Expect=1e-142]} {Celegans: WBGene00001612, glr-1, Glutamate receptor 1, [Score=459, Expect=5e-152]} {Smed: dd_Smed_v6_7562_0_1, dd_Smed_v6_7562_0_1, [Score=528, Expect=2e-179]} {RNA1509_56139} {RNA1310_38868} {RNA815_32684}
32. MligTC455_51200 66 1.37 Mlig455_057090

Neo: -

Age: -

 0.959 - - - 0.959 - - Mlig455_057090 {REF} {Length: 988} {RNA1310_63663} {RNA815_36272}
33. MligTC455_41721 1545 32.19 Mlig455_000238

Neo: -

Age: logFC(26M/2M)=1.827

Region-enriched R2: 7.263/0.00002

 0.958 - - - 0.958 - - Mlig455_000238 {REF} {Length: 600} {RNA1509_17403} {RNA1310_82552.1} {RNA815_43140.1}
34. MligTC455_50544 36 0.75 Mlig455_060525

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_060525 {REF} {Length: 1067} {NoTransDecoderORF}
35. MligTC455_21668 84 1.74 Mlig455_024837

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=1.324

 PPP3R1 0.955 - - - 0.955 - - Mlig455_024837 {REF} {Length: 1650} {Pfam: EF hand [PF00036.34, score=92.6]; EF-hand domain pair [PF13499.8, score=86.6]; EF-hand domain [PF13405.8, score=74.3]; EF hand [PF13202.8, score=72.6]; EF-hand domain pair [PF13833.8, score=65.7]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=30.2]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=27.0]; EF-hand domain [PF14658.8, score=21.7]} {Human: ENSG00000221823, PPP3R1, protein phosphatase 3 regulatory subunit B, alpha, [RH, Score=289, Expect=5e-101]} {Mouse: ENSMUSG00000033953, Ppp3r1, protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I), [RH, Score=289, Expect=3e-101]} {Dmel: FBgn0010014, CanB, Calcineurin B, [RH, Score=282, Expect=1e-98]} {Celegans: WBGene00000554, cnb-1, Protein phosphatase 2B regulatory subunit cnb-1, [RH, Score=272, Expect=7e-95]} {Smed: dd_Smed_v6_5589_0_1, dd_Smed_v6_5589_0_1, [RH, Score=281, Expect=1e-98]} {RNA1509_14613} {RNA1310_16848.1} {RNA815_6272}
36. MligTC455_38201 15 0.31 Mlig455_049794

Neo: -

Age: -

 0.955 - - - - 0.955 - Mlig455_049794 {REF} {Length: 3027} {RNA1509_39834} {RNA1310_21719} {RNA815_53258}
37. MligTC455_47704 106 2.21 Mlig455_032247

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.432

 WSCD2 0.955 - - - 0.955 - - Mlig455_032247 {REF} {Length: 2305} {Pfam: WSC domain [PF01822.21, score=58.4]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=54.7, Expect=1e-07]; ENSG00000131650, KREMEN2, kringle containing transmembrane protein 2, [Score=52.8, Expect=5e-07]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=56.6, Expect=3e-08]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=63.9, Expect=1e-10]} {RNA1509_59284} {RNA1310_13567} {RNA815_27780}
38. MligTC455_17612 38 0.78 Mlig455_057835

Neo: -

Age: -

 ADRB2 0.95 - - - 0.950 - - Mlig455_057835 {REF} {Length: 2257} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=166.7]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=20.1]} {Human: ENSG00000169252, ADRB2, adrenoceptor beta 2, [Score=118, Expect=1e-28]} {Mouse: ENSMUSG00000045730, Adrb2, adrenergic receptor, beta 2, [Score=118, Expect=6e-29]} {Dmel: FBgn0004841, TkR86C, Tachykinin-like receptor at 86C, [Score=129, Expect=4e-32]} {Celegans: WBGene00022004, npr-22, NeuroPeptide Receptor family, [Score=116, Expect=2e-28]} {Smed: dd_Smed_v6_15854_0_1, dd_Smed_v6_15854_0_1, [RH, Score=229, Expect=1e-70]} {RNA1310_66275} {RNA815_49974}
39. MligTC455_28116 36 0.74 Mlig455_023222, Mlig455_068295

Neo: -

Age: Down-Down-Up

 0.95 - - - 0.950 - -

Mlig455_023222 {REF} {Length: 2305} {NoTransDecoderORF} {RNA1509_25886} {RNA1310_11504.1} {RNA815_17069.1}

Mlig455_068295 {REF} {Length: 1692} {NoTransDecoderORF} {RNA1509_25886} {RNA1310_11504.1} {RNA815_17069.1}
40. MligTC455_31313 381 7.94 Mlig455_001901

Neo: -

Age: -

 ARGLU1 0.95 - - - - 0.950 - Mlig455_001901 {REF} {Length: 2328} {TRANSSPLICED} {Pfam: Arginine and glutamate-rich 1 [PF15346.8, score=111.3]} {Human: ENSG00000134884, ARGLU1, arginine and glutamate rich 1, [RH, Score=79.0, Expect=1e-16]} {Mouse: ENSMUSG00000040459, Arglu1, arginine and glutamate rich 1, [RH, Score=79.3, Expect=9e-17]} {Dmel: FBgn0051712, CG31712, [RH, Score=83.2, Expect=3e-18]} {Smed: dd_Smed_v6_6381_0_1, dd_Smed_v6_6381_0_1, [RH, Score=63.9, Expect=5e-12]} {RNA1509_30130} {RNA1310_34850} {RNA815_5433.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA