Data search
Results for MligTC455_09955
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_09955 | 738 | 15.37 | Mlig455_019610, Mlig455_059084 | Neo: - Age: Down-Up-Up |
C12orf4 | Mlig455_019610 {REF} {Length: 3473} {TRANSSPLICED} {Pfam: Uncharacterised conserved protein (DUF2362) [PF10154.11, score=133.8]} {Human: ENSG00000047621, C12orf4, chromosome 12 open reading frame 4, [Score=85.9, Expect=1e-16]} {Mouse: ENSMUSG00000030347, D6Wsu163e, DNA segment, Chr 6, Wayne State University 163, expressed, [Score=85.1, Expect=1e-16]} {Dmel: FBgn0039589, CG9986, [Score=81.3, Expect=1e-15]} {Smed: dd_Smed_v6_5588_0_1, dd_Smed_v6_5588_0_1, [Score=75.5, Expect=7e-14]} {RNA1509_47186} {RNA1310_10936} {RNA815_5422.1} Mlig455_059084 {REF} {Length: 3628} {Pfam: Uncharacterised conserved protein (DUF2362) [PF10154.11, score=335.0]} {Human: ENSG00000047621, C12orf4, chromosome 12 open reading frame 4, [RH, Score=195, Expect=1e-52]} {Mouse: ENSMUSG00000030347, D6Wsu163e, DNA segment, Chr 6, Wayne State University 163, expressed, [RH, Score=196, Expect=5e-53]} {Dmel: FBgn0039589, CG9986, [RH, Score=194, Expect=9e-53]} {Celegans: WBGene00008339, C55A6.10, [RH, Score=156, Expect=6e-40]} {Smed: dd_Smed_v6_5588_0_1, dd_Smed_v6_5588_0_1, [RH, Score=220, Expect=3e-61]} {RNA1509_13194} {RNA1310_10936} {RNA815_4750} |
Cumulative graph for MligTC455_09955
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.939 | 4.343 | 0.49703 | 1.00000 | |
| RegionR2 | -0.763 | 4.343 | 0.13038 | 0.44809 | |
| RegionR3 | 0.147 | 4.343 | 0.69523 | 1.00000 | |
| RegionR4 | 0.585 | 4.343 | 0.18804 | 0.46212 | |
| RegionR5 | 0.573 | 4.343 | 0.08722 | 0.27787 | |
| RegionR6 | 0.067 | 4.343 | 0.86303 | 1.00000 | |
| RegionR7 | 0.337 | 4.343 | 0.49197 | 1.00000 | |
| RegionR8 | -0.007 | 4.343 | 0.99229 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.642 | 4.343 | 0.76119 | 1.00000 | |
| RegenerationR2 | 0.2 | 4.343 | 0.59554 | 0.91372 | |
| RegenerationR3 | -0.241 | 4.343 | 0.54134 | 0.87846 | |
| RegenerationR4 | -0.254 | 4.343 | 0.52690 | 0.88295 | |
| RegenerationR5 | 0.084 | 4.343 | 0.81921 | 0.99404 | |
| RegenerationR6 | 0.474 | 4.343 | 0.22931 | 0.57500 | |
| RegenerationBL | -0.459 | 4.343 | 0.38148 | 0.74989 | |
| RegenerationTP | -0.512 | 4.343 | 0.36846 | 0.80637 |
Genes with expression patterns similar to MligTC455_09955
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_09955 | 738 | 15.37 | Mlig455_019610, Mlig455_059084 | Neo: - Age: Down-Up-Up |
C12orf4 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_019610 {REF} {Length: 3473} {TRANSSPLICED} {Pfam: Uncharacterised conserved protein (DUF2362) [PF10154.11, score=133.8]} {Human: ENSG00000047621, C12orf4, chromosome 12 open reading frame 4, [Score=85.9, Expect=1e-16]} {Mouse: ENSMUSG00000030347, D6Wsu163e, DNA segment, Chr 6, Wayne State University 163, expressed, [Score=85.1, Expect=1e-16]} {Dmel: FBgn0039589, CG9986, [Score=81.3, Expect=1e-15]} {Smed: dd_Smed_v6_5588_0_1, dd_Smed_v6_5588_0_1, [Score=75.5, Expect=7e-14]} {RNA1509_47186} {RNA1310_10936} {RNA815_5422.1} Mlig455_059084 {REF} {Length: 3628} {Pfam: Uncharacterised conserved protein (DUF2362) [PF10154.11, score=335.0]} {Human: ENSG00000047621, C12orf4, chromosome 12 open reading frame 4, [RH, Score=195, Expect=1e-52]} {Mouse: ENSMUSG00000030347, D6Wsu163e, DNA segment, Chr 6, Wayne State University 163, expressed, [RH, Score=196, Expect=5e-53]} {Dmel: FBgn0039589, CG9986, [RH, Score=194, Expect=9e-53]} {Celegans: WBGene00008339, C55A6.10, [RH, Score=156, Expect=6e-40]} {Smed: dd_Smed_v6_5588_0_1, dd_Smed_v6_5588_0_1, [RH, Score=220, Expect=3e-61]} {RNA1509_13194} {RNA1310_10936} {RNA815_4750} |
| 2. | MligTC455_43966 | 972 | 20.25 | Mlig455_070780 | Neo: Int S/G2/M Age: - |
EMC10 | 1.679 | - | - | - | 0.955 | 0.724 | - | Mlig455_070780 {REF} {Length: 876} {TRANSSPLICED} {Human: ENSG00000161671, EMC10, ER membrane protein complex subunit 10, [RH, Score=75.5, Expect=1e-15]} {Mouse: ENSMUSG00000008140, Emc10, ER membrane protein complex subunit 10, [RH, Score=79.0, Expect=2e-17]} {Dmel: FBgn0052441, CG32441, [RH, Score=64.7, Expect=1e-12]} {Celegans: WBGene00012829, Y43F8C.7, [RH, Score=62.4, Expect=8e-12]} {Smed: dd_Smed_v6_2594_0_1, dd_Smed_v6_2594_0_1, [RH, Score=89.7, Expect=5e-22]} {RNA1509_27493, RNA1509_41782} {RNA1310_9560, RNA1509_41782} {RNA1509_41782, RNA815_13374} |
| 3. | MligTC455_47151 | 250 | 5.21 | Mlig455_049463 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.486/0.01348 |
MFSD9 | 1.67 | - | - | - | 0.709 | 0.961 | - | Mlig455_049463 {REF} {Length: 1654} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=40.5]} {Human: ENSG00000135953, MFSD9, major facilitator superfamily domain containing 9, [Score=73.2, Expect=2e-13]} {Mouse: ENSMUSG00000041945, Mfsd9, major facilitator superfamily domain containing 9, [Score=87.4, Expect=2e-18]} {Smed: dd_Smed_v6_9599_0_1, dd_Smed_v6_9599_0_1, [Score=151, Expect=9e-42]} {RNA1509_53696} {RNA1310_20924} {RNA815_32582} |
| 4. | MligTC455_21819 | 626 | 13.04 | Mlig455_044417 | Neo: - Age: - Region-enriched R5: 1.582/0.00000 |
MAP3K4 | 0.973 | - | - | - | - | 0.973 | - | Mlig455_044417 {REF} {Length: 7591} {TRANSSPLICED} {Pfam: MEKK4 N-terminal [PF19431.1, score=209.6]; Protein kinase domain [PF00069.27, score=175.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=81.6]} {Human: ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [RH, Score=209, Expect=8e-54]} {Mouse: ENSMUSG00000014426, Map3k4, mitogen-activated protein kinase kinase kinase 4, [RH, Score=202, Expect=8e-52]} {Dmel: FBgn0024329, Mekk1, [RH, Score=177, Expect=2e-44]} {Celegans: WBGene00003472, mtk-1, MTK1/MEKK4 homolog, [RH, Score=156, Expect=4e-38]} {Smed: dd_Smed_v6_3368_0_1, dd_Smed_v6_3368_0_1, [RH, Score=149, Expect=5e-36]} {RNA1509_4665, RNA1509_53156} {RNA1310_817, RNA1509_4665, RNA1509_53156} {RNA1509_4665, RNA1509_53156, RNA815_270.1} |
| 5. | MligTC455_40902 | 615 | 12.81 | Mlig455_067443, Mlig455_069598 | Neo: - Age: - |
0.96 | - | - | 0.960 | - | - | - | Mlig455_067443 {REF} {Length: 4375} {TRANSSPLICED} {RNA1509_8113} {RNA1310_2282.1} {RNA815_1659} Mlig455_069598 {REF} {Length: 4081} {TRANSSPLICED} {Smed: dd_Smed_v6_15433_0_1, dd_Smed_v6_15433_0_1, [Score=135, Expect=3e-32]} {RNA1509_8113} {RNA1310_2282.1} {RNA815_1659} |
|
| 6. | MligTC455_42796 | 1039 | 21.65 | Mlig455_007162 | Neo: Int S/G2/M Age: - |
POLR3C | 0.956 | - | - | - | - | 0.956 | - | Mlig455_007162 {REF} {Length: 2368} {Pfam: RNA polymerase III subunit RPC82 [PF05645.15, score=24.4]; RNA polymerase III subunit RPC82 helix-turn-helix domain [PF08221.13, score=19.6]; TFIIE alpha subunit [PF02002.19, score=18.9]} {Human: ENSG00000186141, POLR3C, RNA polymerase III subunit C, [RH, Score=180, Expect=7e-49]} {Mouse: ENSMUSG00000028099, Polr3c, polymerase (RNA) III (DNA directed) polypeptide C, [RH, Score=182, Expect=6e-50]} {Dmel: FBgn0038057, CG12267, [RH, Score=106, Expect=7e-24]} {RNA1509_35650, RNA1509_37338, RNA1509_8125} {RNA1310_9635.1, RNA1509_35650, RNA1509_37338} {RNA1509_35650, RNA1509_37338, RNA815_3590.1} |
| 7. | MligTC455_38247 | 634 | 13.22 | Mlig455_025209, Mlig455_025650 | Neo: Irradiation Age: logFC(26M/2M)=-0.195 |
SLC6A5 | 0.953 | - | - | - | - | 0.953 | - | Mlig455_025209 {REF} {Length: 2439} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=613.8]} {Human: ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=520, Expect=2e-173]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=522, Expect=2e-174]} {Dmel: FBgn0034911, CG5549, [Score=466, Expect=6e-149]} {Celegans: WBGene00004910, snf-11, Transporter, [Score=402, Expect=1e-130]} {Smed: dd_Smed_v6_6616_0_1, dd_Smed_v6_6616_0_1, [RH, Score=644, Expect=0.0]} {RNA1509_1266, RNA1509_19993, RNA1509_8989} {RNA1310_2851, RNA1509_19993, RNA1509_8989} {RNA1509_19993, RNA1509_8989, RNA815_990} Mlig455_025650 {REF} {Length: 4261} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=613.8]} {Human: ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=520, Expect=2e-173]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=522, Expect=2e-174]} {Dmel: FBgn0034911, CG5549, [Score=466, Expect=6e-149]} {Celegans: WBGene00004910, snf-11, Transporter, [Score=402, Expect=1e-130]} {Smed: dd_Smed_v6_6616_0_1, dd_Smed_v6_6616_0_1, [RH, Score=644, Expect=0.0]} {RNA1509_1266, RNA1509_59101} {RNA1310_2851, RNA1509_1266, RNA1509_59101} {RNA1509_1266, RNA1509_59101, RNA815_990} |
| 8. | MligTC455_40717 | 240 | 4.99 | Mlig455_028054 | Neo: - Age: - Region-enriched R5: 1.252/0.02695 |
0.951 | - | - | - | - | 0.951 | - | Mlig455_028054 {REF} {Length: 201} {NoTransDecoderORF} {RNA1509_45107} {RNA1310_16278.1} | |
| 9. | MligTC455_47709 | 1872 | 39.01 | Mlig455_047598 | Neo: - Age: logFC(26M/2M)=-0.374 |
PPP3R1 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_047598 {REF} {Length: 1241} {TRANSSPLICED} {Pfam: EF hand [PF00036.34, score=93.2]; EF-hand domain pair [PF13499.8, score=89.0]; EF-hand domain [PF13405.8, score=74.7]; EF hand [PF13202.8, score=71.4]; EF-hand domain pair [PF13833.8, score=60.0]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=34.0]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=32.3]; EF-hand domain [PF14658.8, score=21.2]} {Human: ENSG00000221823, PPP3R1, protein phosphatase 3 regulatory subunit B, alpha, [RH, Score=282, Expect=2e-98]} {Mouse: ENSMUSG00000033953, Ppp3r1, protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I), [RH, Score=282, Expect=1e-98]} {Dmel: FBgn0015614, CanB2, Calcineurin B2, [RH, Score=274, Expect=1e-95]} {Celegans: WBGene00000554, cnb-1, Protein phosphatase 2B regulatory subunit cnb-1, [RH, Score=273, Expect=2e-95]} {Smed: dd_Smed_v6_4924_0_1, dd_Smed_v6_4924_0_1, [RH, Score=284, Expect=9e-100]} {RNA1509_11959, RNA1509_13463, RNA1509_9349} {RNA1310_27599, RNA1509_11959, RNA1509_13463, RNA1509_9349} {RNA1509_11959, RNA1509_13463, RNA1509_9349, RNA815_11356} |