TomoSeq data search

Data search

Results for MligTC455_09963

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_09963	11	0.22	Mlig455_062967	Neo: - Age: -		Mlig455_062967 {REF} {Length: 3189} {Pfam: gag-polyprotein putative aspartyl protease [PF13975.8, score=28.1]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=25.3]; Aspartyl protease [PF13650.8, score=23.0]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=52.8, Expect=3e-07]} {RNA1509_40740} {RNA1310_2889.1} {RNA815_920.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_09963

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	1.16	0.651	0.99987	1.00000
RegionR2	1.277	0.651	0.99965	1.00000
RegionR3	-0.995	0.651	0.99974	1.00000
RegionR4	-0.78	0.651	0.99959	1.00000
RegionR5	-1.71	0.651	0.99980	1.00000
RegionR6	-0.834	0.651	0.99972	1.00000
RegionR7	0.991	0.651	0.99991	1.00000
RegionR8	0.891	0.651	0.99992	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	3.421	0.651	0.90818	1.00000
RegenerationR2	2.151	0.651	0.02506	0.26126
RegenerationR3	4.12	0.651	0.21198	0.64785
RegenerationR4	3.457	0.651	0.33705	0.76990
RegenerationR5	3.326	0.651	0.13588	0.54554
RegenerationR6	3.606	0.651	0.13153	0.44520
RegenerationBL	1.735	0.651	0.24581	0.60058
RegenerationTP	-0.127	0.651	0.99989	1.00000

Genes with expression patterns similar to MligTC455_09963

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_09963	11	0.22	Mlig455_062967	Neo: - Age: -		1	-	-	-	-	1.000	-	Mlig455_062967 {REF} {Length: 3189} {Pfam: gag-polyprotein putative aspartyl protease [PF13975.8, score=28.1]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=25.3]; Aspartyl protease [PF13650.8, score=23.0]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=52.8, Expect=3e-07]} {RNA1509_40740} {RNA1310_2889.1} {RNA815_920.1}
2.	MligTC455_09962	22	0.45	Mlig455_051186	Neo: - Age: -		0.96	-	-	-	-	0.960	-	Mlig455_051186 {REF} {Length: 3971} {TRANSSPLICED} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=118.5]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=108.5]; Integrase zinc binding domain [PF17921.3, score=59.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=48.8]; gag-polyprotein putative aspartyl protease [PF13975.8, score=25.4]; Aspartyl protease [PF13650.8, score=21.0]; H2C2 zinc finger [PF09337.12, score=19.7]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=189, Expect=7e-49]} {RNA1509_40740} {RNA1310_3586} {RNA815_920.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_09963

0.22

Mlig455_062967

Neo: -

Age: -

1.000

MligTC455_09962

0.45

Mlig455_051186

Neo: -

Age: -

0.96

0.960

Mlig455_051186 {REF} {Length: 3971} {TRANSSPLICED} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=118.5]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=108.5]; Integrase zinc binding domain [PF17921.3, score=59.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=48.8]; gag-polyprotein putative aspartyl protease [PF13975.8, score=25.4]; Aspartyl protease [PF13650.8, score=21.0]; H2C2 zinc finger [PF09337.12, score=19.7]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=189, Expect=7e-49]} {RNA1509_40740} {RNA1310_3586} {RNA815_920.1}