TomoSeq data search

Data search

Results for MligTC455_10118

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_10118	28	0.58	Mlig455_053347	Neo: - Age: -		Mlig455_053347 {REF} {Length: 549} {NoTransDecoderORF} {RNA1310_103933}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_10118

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.973	0.864	1.00000	1.00000
RegionR2	-0.361	0.864	0.86130	1.00000
RegionR3	-0.241	0.864	0.84374	1.00000
RegionR4	1.975	0.864	0.22849	0.52113
RegionR5	1.345	0.864	0.27375	0.59972
RegionR6	-0.266	0.864	0.84614	1.00000
RegionR7	-2.695	0.864	0.99960	1.00000
RegionR8	2.217	0.864	0.31688	0.94967

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-1.005	0.864	0.99996	1.00000
RegenerationR2	-0.788	0.864	0.45117	0.84775
RegenerationR3	-2.776	0.864	0.13186	0.55542
RegenerationR4	-0.724	0.864	0.56217	0.89787
RegenerationR5	-3.25	0.864	0.01476	0.21142
RegenerationR6	-0.17	0.864	0.93489	1.00000
RegenerationBL	2.363	0.864	0.13985	0.44565
RegenerationTP	-2.857	0.864	1.00000	1.00000

Genes with expression patterns similar to MligTC455_10118

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_10118	28	0.58	Mlig455_053347	Neo: - Age: -		2	-	-	1.000	-	1.000	-	Mlig455_053347 {REF} {Length: 549} {NoTransDecoderORF} {RNA1310_103933}
2.	MligTC455_31626	38	0.79	Mlig455_032857	Neo: - Age: -	SLC23A1	1.812	-	-	0.857	-	0.955	-	Mlig455_032857 {REF} {Length: 2462} {Pfam: Permease family [PF00860.22, score=281.6]} {Human: ENSG00000170482, SLC23A1, solute carrier family 23 member 1, [Score=400, Expect=4e-132]; ENSG00000089057, SLC23A2, solute carrier family 23 member 2, [Score=380, Expect=1e-123]} {Mouse: ENSMUSG00000029847, Slc23a4, solute carrier family 23 member 4, [Score=421, Expect=4e-140]} {Dmel: FBgn0037807, CG6293, [Score=355, Expect=2e-115]} {Celegans: WBGene00008252, C51E3.6, [RH, Score=250, Expect=1e-75]} {Smed: dd_Smed_v6_9401_0_1, dd_Smed_v6_9401_0_1, [RH, Score=304, Expect=9e-96]} {RNA1509_16219} {RNA1310_39982} {RNA815_42063}
3.	MligTC455_44483	88	1.84	Mlig455_027611, Mlig455_047700	Neo: - Age: -	WSCD2	1.806	-	-	0.965	-	0.841	-	Mlig455_027611 {REF} {Length: 946} {Pfam: WSC domain [PF01822.21, score=54.5]; PAN domain [PF00024.28, score=23.7]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=56.2, Expect=6e-09]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=58.5, Expect=7e-10]} {Celegans: WBGene00005024, sqv-6, Xylosyltransferase sqv-6, [Score=52.0, Expect=9e-08]} {RNA1509_29094} {RNA1310_36326} {RNA815_27950.1} Mlig455_047700 {REF} {Length: 949} {Pfam: WSC domain [PF01822.21, score=54.2]; PAN domain [PF00024.28, score=23.7]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=55.1, Expect=3e-08]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=57.4, Expect=2e-09]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=58.9, Expect=7e-10]} {Celegans: WBGene00005024, sqv-6, Xylosyltransferase sqv-6, [Score=52.0, Expect=1e-07]} {RNA1509_29094} {RNA1310_36326} {RNA815_27950.1}
4.	MligTC455_20661	23	0.47	Mlig455_057282	Neo: - Age: -		0.986	-	-	-	-	0.986	-	Mlig455_057282 {REF} {Length: 3444} {NoTransDecoderORF} {RNA1509_18723} {RNA1310_2938.1} {RNA815_14343.2}
5.	MligTC455_07771	25	0.53	Mlig455_003398	Neo: - Age: Up-Down-Up Region-enriched R2: 7.012/0.01381		0.981	-	-	0.981	-	-	-	Mlig455_003398 {REF} {Length: 1701} {RNA1509_48780} {RNA1310_65644.1} {RNA815_18118.2}
6.	MligTC455_41995	104	2.17	Mlig455_021586	Neo: Int S/G2/M Age: -	DNAJC5	0.98	-	-	0.980	-	-	-	Mlig455_021586 {REF} {Length: 3123} {Pfam: DnaJ domain [PF00226.33, score=92.6]} {Human: ENSG00000101152, DNAJC5, DnaJ heat shock protein family (Hsp40) member C5, [Score=150, Expect=2e-44]; ENSG00000147570, DNAJC5B, DnaJ heat shock protein family (Hsp40) member C5 beta, [Score=143, Expect=2e-41]} {Mouse: ENSMUSG00000000826, Dnajc5, DnaJ heat shock protein family (Hsp40) member C5, [Score=150, Expect=8e-45]; ENSMUSG00000027606, Dnajc5b, DnaJ heat shock protein family (Hsp40) member C5 beta, [Score=147, Expect=2e-43]} {Dmel: FBgn0004179, Csp, Cysteine string protein, [Score=169, Expect=1e-51]} {Celegans: WBGene00001032, dnj-14, DNaJ domain (Prokaryotic heat shock protein), [RH, Score=130, Expect=9e-37]} {Smed: dd_Smed_v6_5990_0_1, dd_Smed_v6_5990_0_1, [Score=144, Expect=2e-42]} {RNA1509_16006} {RNA1310_27354.1} {RNA815_17167}
7.	MligTC455_10132	10	0.2	Mlig455_067128	Neo: - Age: -		0.979	-	-	-	-	0.979	-	Mlig455_067128 {REF} {Length: 2015}
8.	MligTC455_31174	43	0.89	Mlig455_066686	Neo: - Age: -		0.976	-	-	0.976	-	-	-	Mlig455_066686 {REF} {Length: 1562} {Pfam: Glycosyltransferase family 92 [PF01697.29, score=108.0]; Glycosyl transferase family 2 [PF13704.8, score=25.6]} {Dmel: FBgn0032506, CG9395, [Score=104, Expect=5e-24]} {Celegans: WBGene00012941, Y47D3B.4, [Score=51.6, Expect=5e-07]} {Smed: dd_Smed_v6_5401_0_1, dd_Smed_v6_5401_0_1, [Score=200, Expect=8e-60]} {RNA1310_16379.1} {RNA815_14941.1}
9.	MligTC455_31941	19	0.4	Mlig455_026629	Neo: - Age: -	MTFP1	0.97	-	-	-	-	0.970	-	Mlig455_026629 {REF} {Length: 3879} {TRANSSPLICED} {Pfam: SecA DEAD-like domain [PF07517.16, score=61.6]; Mitochondrial 18 KDa protein (MTP18) [PF10558.11, score=26.7]} {Human: ENSG00000242114, MTFP1, mitochondrial fission process 1, [Score=113, Expect=2e-28]; ENSG00000249590, AC004832.3, novel SEC14-like 2 (S. cerevisiae) (SEC14L2) and mitochondrial protein 18 kDa (MTP18) protein, [Score=111, Expect=7e-26]} {Mouse: ENSMUSG00000004748, Mtfp1, mitochondrial fission process 1, [Score=119, Expect=9e-31]} {Dmel: FBgn0030883, CG7772, [Score=92.4, Expect=2e-21]} {Celegans: WBGene00077690, mtp-18, Mitochondrial fission process protein 1, [Score=124, Expect=1e-32]} {RNA1509_27482} {RNA1310_24566.1} {RNA815_10756.1}
10.	MligTC455_39144	127	2.64	Mlig455_036039, Mlig455_036130, Mlig455_036165, Mlig455_071153	Neo: Irradiation Age: Up-Down-Down		0.969	-	-	-	-	0.969	-	Mlig455_036039 {REF} {Length: 820} {NoTransDecoderORF} {RNA1310_66203.1} {RNA815_34104} Mlig455_036130 {REF} {Length: 2044} {RNA1310_66203.1} {RNA815_34104} Mlig455_036165 {REF} {Length: 820} {NoTransDecoderORF} {RNA1310_66203.1} {RNA815_34104} Mlig455_071153 {REF} {Length: 687} {RNA1310_82360} {RNA815_42640}
11.	MligTC455_48416	135	2.81	Mlig455_059481	Neo: - Age: -	TMEM74B	0.968	-	-	-	-	0.968	-	Mlig455_059481 {REF} {Length: 1441} {Pfam: Neurensin [PF14927.8, score=35.3]; Protein of unknown function (DUF3040) [PF11239.10, score=19.8]} {Human: ENSG00000125895, TMEM74B, transmembrane protein 74B, [Score=47.4, Expect=8e-07]} {Mouse: ENSMUSG00000044364, Tmem74b, transmembrane protein 74B, [Score=47.0, Expect=8e-07]} {RNA1509_33327} {RNA1310_52843} {RNA815_44553}
12.	MligTC455_52292	114	2.37	Mlig455_018142	Neo: - Age: Down-Up-Down		0.963	-	-	0.963	-	-	-	Mlig455_018142 {REF} {Length: 3358} {RNA1509_41463} {RNA1310_26044.1} {RNA815_6737}
13.	MligTC455_23277	53	1.09	Mlig455_019574, Mlig455_059124	Neo: - Age: -	CCDC102B	0.956	-	-	0.956	-	-	-	Mlig455_019574 {REF} {Length: 3576} {TRANSSPLICED} {Human: ENSG00000150636, CCDC102B, coiled-coil domain containing 102B, [Score=97.1, Expect=2e-20]} {Mouse: ENSMUSG00000063605, Ccdc102a, coiled-coil domain containing 102A, [Score=103, Expect=9e-23]} {Dmel: FBgn0051638, CG31638, [RH, Score=120, Expect=7e-28]} {Celegans: WBGene00015646, mlt-10, [Score=145, Expect=6e-36]} {Smed: dd_Smed_v6_13699_0_1, dd_Smed_v6_13699_0_1, [RH, Score=84.0, Expect=3e-17]} {RNA1310_5839.1} {RNA815_37688} Mlig455_059124 {REF} {Length: 1588} {TRANSSPLICED} {Human: ENSG00000150636, CCDC102B, coiled-coil domain containing 102B, [RH, Score=83.2, Expect=6e-17]} {Mouse: ENSMUSG00000063605, Ccdc102a, coiled-coil domain containing 102A, [Score=82.0, Expect=4e-16]} {Dmel: FBgn0051638, CG31638, [Score=100, Expect=6e-22]} {Celegans: WBGene00018763, F53F10.1, [Score=84.7, Expect=2e-18]} {Smed: dd_Smed_v6_13699_0_1, dd_Smed_v6_13699_0_1, [RH, Score=81.3, Expect=1e-16]} {RNA1310_5839.1} {RNA815_37688}
14.	MligTC455_54100	57	1.18	Mlig455_036019, Mlig455_036108	Neo: - Age: -	ANGPTL2	0.955	-	-	-	-	0.955	-	Mlig455_036019 {REF} {Length: 1076} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=137.0]} {Human: ENSG00000136859, ANGPTL2, angiopoietin like 2, [Score=121, Expect=3e-34]; ENSG00000160339, FCN2, ficolin 2, [Score=119, Expect=7e-33]; ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=117, Expect=9e-31]} {Mouse: ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=122, Expect=2e-32]; ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=121, Expect=3e-32]; ENSMUSG00000038742, Angptl6, angiopoietin-like 6, [Score=116, Expect=2e-30]} {Dmel: FBgn0003326, sca, scabrous, [Score=112, Expect=1e-28]} {Celegans: WBGene00017013, ensh-1, [Score=48.9, Expect=5e-07]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=114, Expect=1e-29]} {RNA1509_26827} {RNA1310_31840} {RNA815_17173.1} Mlig455_036108 {REF} {Length: 1344} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=152.2]} {Human: ENSG00000136859, ANGPTL2, angiopoietin like 2, [Score=134, Expect=2e-34]; ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=133, Expect=4e-34]; ENSG00000160339, FCN2, ficolin 2, [Score=132, Expect=9e-35]; ENSG00000130720, FIBCD1, fibrinogen C domain containing 1, [Score=129, Expect=1e-32]} {Mouse: ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=137, Expect=1e-35]; ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=134, Expect=2e-34]} {Dmel: FBgn0003326, sca, scabrous, [RH, Score=124, Expect=1e-30]} {Smed: dd_Smed_v6_74244_0_1, dd_Smed_v6_74244_0_1, [Score=47.4, Expect=8e-07]} {RNA1509_26827} {RNA1310_33619.1} {RNA815_17173.3}
15.	MligTC455_15051	112	2.33	Mlig455_028585, Mlig455_056915	Neo: - Age: -		0.954	-	-	-	-	0.954	-	Mlig455_028585 {REF} {Length: 982} {Smed: dd_Smed_v6_3795_0_2, dd_Smed_v6_3795_0_2, [RH, Score=86.7, Expect=1e-19]} {RNA1509_32017} {RNA1310_2395.2} {RNA815_496.1} Mlig455_056915 {REF} {Length: 1277} {Smed: dd_Smed_v6_3795_0_2, dd_Smed_v6_3795_0_2, [RH, Score=86.7, Expect=1e-19]} {RNA1509_32017} {RNA1310_2395.2} {RNA815_496.1}
16.	MligTC455_46631	123	2.57	Mlig455_047437	Neo: - Age: Down-Up-Down	GFI1	0.954	-	-	0.954	-	-	-	Mlig455_047437 {REF} {Length: 2141} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=92.6]; Zinc-finger double domain [PF13465.8, score=91.3]; C2H2-type zinc finger [PF13894.8, score=70.8]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=40.4]; C2H2-type zinc finger [PF13912.8, score=32.5]; BED zinc finger [PF02892.17, score=21.4]; Zinc-finger of C2H2 type [PF12874.9, score=19.3]} {Human: ENSG00000162676, GFI1, growth factor independent 1 transcriptional repressor, [RH, Score=297, Expect=7e-97]; ENSG00000165702, GFI1B, growth factor independent 1B transcriptional repressor, [RH, Score=294, Expect=7e-97]} {Mouse: ENSMUSG00000029275, Gfi1, growth factor independent 1 transcription repressor, [RH, Score=299, Expect=8e-97]; ENSMUSG00000026815, Gfi1b, growth factor independent 1B, [RH, Score=294, Expect=4e-97]} {Dmel: FBgn0051632, sens-2, senseless-2, [RH, Score=298, Expect=6e-94]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [RH, Score=236, Expect=8e-75]} {Smed: dd_Smed_v6_14824_0_1, dd_Smed_v6_14824_0_1, [RH, Score=273, Expect=5e-89]} {RNA1509_50869} {RNA1310_63181} {RNA815_39346}
17.	MligTC455_01752	25	0.51	Mlig455_000951	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_000951 {REF} {Length: 1210} {NoTransDecoderORF}
18.	MligTC455_13366	19	0.4	Mlig455_052807	Neo: - Age: -		0.953	-	-	0.953	-	-	-	Mlig455_052807 {REF} {Length: 1558} {Smed: dd_Smed_v6_83746_0_1, dd_Smed_v6_83746_0_1, [Score=54.7, Expect=1e-09]} {RNA1509_45595} {RNA1310_105664} {RNA815_48802}
19.	MligTC455_09104	49	1.02	Mlig455_017623	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.812		0.952	-	-	0.952	-	-	-	Mlig455_017623 {REF} {Length: 3447} {Pfam: Innexin [PF00876.20, score=289.7]} {Dmel: FBgn0027108, Inx2, Innexin 2, [Score=70.9, Expect=4e-13]} {Celegans: WBGene00006747, unc-7, Innexin unc-7, [Score=201, Expect=9e-60]} {Smed: dd_Smed_v6_6114_0_3, dd_Smed_v6_6114_0_3, [Score=218, Expect=1e-65]} {RNA1509_23309, RNA1509_51138} {RNA1310_18761, RNA1509_51138} {RNA1509_51138, RNA815_7809.1}
20.	MligTC455_29939	51	1.06	Mlig455_033991	Neo: - Age: Up-Down-Up	ERCC4	0.952	-	-	0.952	-	-	-	Mlig455_033991 {REF} {Length: 6659} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=105.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=97.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=84.9]; ERCC4 domain [PF02732.17, score=62.3]; Integrase zinc binding domain [PF17921.3, score=59.8]; Integrase core domain [PF00665.28, score=54.3]; H2C2 zinc finger [PF09337.12, score=19.6]; Integrase core domain [PF13683.8, score=18.3]} {Human: ENSG00000175595, ERCC4, ERCC excision repair 4, endonuclease catalytic subunit, [Score=390, Expect=4e-116]} {Mouse: ENSMUSG00000022545, Ercc4, excision repair cross-complementing rodent repair deficiency, complementation group 4, [RH, Score=391, Expect=7e-117]} {Dmel: FBgn0002707, mei-9, meiotic 9, [RH, Score=343, Expect=1e-99]} {Celegans: WBGene00008140, xpf-1, (Xeroderma Pigmentosum group F) DNA repair gene homolog, [RH, Score=176, Expect=1e-44]} {Smed: dd_Smed_v6_15639_0_2, dd_Smed_v6_15639_0_2, [Score=347, Expect=3e-102]} {RNA1509_11359} {RNA1310_617} {RNA815_3663}
21.	MligTC455_18893	9	0.19	Mlig455_042669	Neo: - Age: -		0.95	-	-	0.950	-	-	-	Mlig455_042669 {REF} {Length: 552} {NoTransDecoderORF} {RNA1310_147734}