Data search


search
Exact
Search

Results for MligTC455_10131

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_10131 14 0.30 Mlig455_007060

Neo: Irradiation

Age: Up-Down-Down

TNPO1 Mlig455_007060 {REF} {Length: 4595} {Pfam: HEAT-like repeat [PF13513.8, score=87.2]; HEAT repeat [PF02985.24, score=70.6]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=52.8]; HEAT repeats [PF13646.8, score=49.1]; Importin-beta N-terminal domain [PF03810.21, score=48.7]; Vacuolar 14 Fab1-binding region [PF12755.9, score=48.6]; Adaptin N terminal region [PF01602.22, score=37.2]; Armadillo/beta-catenin-like repeat [PF00514.25, score=22.9]; CLASP N terminal [PF12348.10, score=20.7]} {Human: ENSG00000083312, TNPO1, transportin 1, [RH, Score=1064, Expect=0.0]} {Mouse: ENSMUSG00000009470, Tnpo1, transportin 1, [RH, Score=1066, Expect=0.0]; ENSMUSG00000031691, Tnpo2, transportin 2 (importin 3, karyopherin beta 2b), [RH, Score=1039, Expect=0.0]} {Dmel: FBgn0024921, Tnpo, Transportin, [RH, Score=1025, Expect=0.0]} {Celegans: WBGene00002076, imb-2, IMportin Beta family, [RH, Score=812, Expect=0.0]} {Smed: dd_Smed_v6_4883_1_1, dd_Smed_v6_4883_1_1, [RH, Score=1074, Expect=0.0]} {RNA1509_40705, RNA1509_45804, RNA1509_49178, RNA1509_52888, RNA1509_8251} {RNA1310_2726, RNA1509_40705, RNA1509_45804, RNA1509_49178, RNA1509_52888} {RNA1509_40705, RNA1509_45804, RNA1509_49178, RNA1509_52888, RNA815_974.1}

Cumulative graph for MligTC455_10131

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_10131

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_10131 14 0.3 Mlig455_007060

Neo: Irradiation

Age: Up-Down-Down

TNPO1 1 - - - - 1.000 - Mlig455_007060 {REF} {Length: 4595} {Pfam: HEAT-like repeat [PF13513.8, score=87.2]; HEAT repeat [PF02985.24, score=70.6]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=52.8]; HEAT repeats [PF13646.8, score=49.1]; Importin-beta N-terminal domain [PF03810.21, score=48.7]; Vacuolar 14 Fab1-binding region [PF12755.9, score=48.6]; Adaptin N terminal region [PF01602.22, score=37.2]; Armadillo/beta-catenin-like repeat [PF00514.25, score=22.9]; CLASP N terminal [PF12348.10, score=20.7]} {Human: ENSG00000083312, TNPO1, transportin 1, [RH, Score=1064, Expect=0.0]} {Mouse: ENSMUSG00000009470, Tnpo1, transportin 1, [RH, Score=1066, Expect=0.0]; ENSMUSG00000031691, Tnpo2, transportin 2 (importin 3, karyopherin beta 2b), [RH, Score=1039, Expect=0.0]} {Dmel: FBgn0024921, Tnpo, Transportin, [RH, Score=1025, Expect=0.0]} {Celegans: WBGene00002076, imb-2, IMportin Beta family, [RH, Score=812, Expect=0.0]} {Smed: dd_Smed_v6_4883_1_1, dd_Smed_v6_4883_1_1, [RH, Score=1074, Expect=0.0]} {RNA1509_40705, RNA1509_45804, RNA1509_49178, RNA1509_52888, RNA1509_8251} {RNA1310_2726, RNA1509_40705, RNA1509_45804, RNA1509_49178, RNA1509_52888} {RNA1509_40705, RNA1509_45804, RNA1509_49178, RNA1509_52888, RNA815_974.1}
2. MligTC455_41764 28 0.58 Mlig455_067189

Neo: -

Age: -

0.97 - - - - 0.970 - Mlig455_067189 {REF} {Length: 1210} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=53.7]} {Smed: dd_Smed_v6_21509_0_1, dd_Smed_v6_21509_0_1, [Score=51.2, Expect=4e-07]} {RNA1310_24513} {RNA815_25505}
3. MligTC455_00611 10 0.21 Mlig455_003029

Neo: -

Age: -

0.962 - - - - 0.962 - Mlig455_003029 {REF} {Length: 289} {NoTransDecoderORF}
4. MligTC455_15877 17 0.35 Mlig455_049677

Neo: Int S/G2/M

Age: -

0.952 - - - - 0.952 - Mlig455_049677 {REF} {Length: 571} {RNA1310_90109}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA