Data search
Results for MligTC455_10371
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_10371 | 1704 | 35.51 | Mlig455_005903 | Neo: - Age: logFC(26M/2M)=-0.174 Region-enriched R4: 1.279/0.02326 |
COPE | Mlig455_005903 {REF} {Length: 1490} {Pfam: Coatomer epsilon subunit [PF04733.16, score=356.1]; Tetratricopeptide repeat [PF14559.8, score=28.6]; Tetratricopeptide repeat [PF13428.8, score=26.6]; Tetratricopeptide repeat [PF13424.8, score=24.7]; Tetratricopeptide repeat [PF07719.19, score=23.8]; Tetratricopeptide repeat [PF13432.8, score=21.4]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=20.6]; Tetratricopeptide repeat [PF13176.8, score=19.2]} {Human: ENSG00000105669, COPE, coatomer protein complex subunit epsilon, [RH, Score=340, Expect=4e-117]} {Mouse: ENSMUSG00000055681, Cope, coatomer protein complex, subunit epsilon, [RH, Score=337, Expect=5e-116]} {Dmel: FBgn0027496, epsilonCOP, Coat Protein (coatomer) epsilon, [RH, Score=173, Expect=5e-52]} {Celegans: WBGene00009732, cope-1, Coatomer subunit epsilon, [RH, Score=184, Expect=2e-56]} {Smed: dd_Smed_v6_1956_0_1, dd_Smed_v6_1956_0_1, [RH, Score=275, Expect=6e-92]} {RNA1509_16770, RNA1509_17231, RNA1509_3221} {RNA1310_24235.1, RNA1509_16770, RNA1509_17231} {RNA1509_16770, RNA1509_17231, RNA815_10191.1} |
Cumulative graph for MligTC455_10371
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.906 | 5.286 | 0.28741 | 0.93926 | |
| RegionR2 | -0.719 | 5.286 | 0.10053 | 0.38984 | |
| RegionR3 | -0.247 | 5.286 | 0.50563 | 0.99691 | |
| RegionR4 | 1.279 | 5.286 | 0.00281 | 0.02326 | |
| RegionR5 | 1.015 | 5.286 | 0.00248 | 0.02051 | |
| RegionR6 | 0.298 | 5.286 | 0.41400 | 0.98242 | |
| RegionR7 | -0.14 | 5.286 | 0.75823 | 1.00000 | |
| RegionR8 | -0.58 | 5.286 | 0.32371 | 0.95723 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.477 | 5.286 | 0.69239 | 1.00000 | |
| RegenerationR2 | 0.028 | 5.286 | 0.94624 | 1.00000 | |
| RegenerationR3 | 0.407 | 5.286 | 0.35053 | 0.77133 | |
| RegenerationR4 | 0.209 | 5.286 | 0.63129 | 0.92378 | |
| RegenerationR5 | -0.051 | 5.286 | 0.89867 | 1.00000 | |
| RegenerationR6 | 0.159 | 5.286 | 0.71201 | 0.93086 | |
| RegenerationBL | 0.8 | 5.286 | 0.05177 | 0.26222 | |
| RegenerationTP | 0.329 | 5.286 | 0.50462 | 0.90330 |
Genes with expression patterns similar to MligTC455_10371
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_10371 | 1704 | 35.51 | Mlig455_005903 | Neo: - Age: logFC(26M/2M)=-0.174 Region-enriched R4: 1.279/0.02326 |
COPE | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_005903 {REF} {Length: 1490} {Pfam: Coatomer epsilon subunit [PF04733.16, score=356.1]; Tetratricopeptide repeat [PF14559.8, score=28.6]; Tetratricopeptide repeat [PF13428.8, score=26.6]; Tetratricopeptide repeat [PF13424.8, score=24.7]; Tetratricopeptide repeat [PF07719.19, score=23.8]; Tetratricopeptide repeat [PF13432.8, score=21.4]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=20.6]; Tetratricopeptide repeat [PF13176.8, score=19.2]} {Human: ENSG00000105669, COPE, coatomer protein complex subunit epsilon, [RH, Score=340, Expect=4e-117]} {Mouse: ENSMUSG00000055681, Cope, coatomer protein complex, subunit epsilon, [RH, Score=337, Expect=5e-116]} {Dmel: FBgn0027496, epsilonCOP, Coat Protein (coatomer) epsilon, [RH, Score=173, Expect=5e-52]} {Celegans: WBGene00009732, cope-1, Coatomer subunit epsilon, [RH, Score=184, Expect=2e-56]} {Smed: dd_Smed_v6_1956_0_1, dd_Smed_v6_1956_0_1, [RH, Score=275, Expect=6e-92]} {RNA1509_16770, RNA1509_17231, RNA1509_3221} {RNA1310_24235.1, RNA1509_16770, RNA1509_17231} {RNA1509_16770, RNA1509_17231, RNA815_10191.1} |
| 2. | MligTC455_48912 | 1317 | 27.44 | Mlig455_042981, Mlig455_043015 | Neo: - Age: - |
GOLGA4 | 1.751 | - | - | 0.798 | 0.953 | - | - | Mlig455_042981 {REF} {Length: 3206} {Pfam: GRIP domain [PF01465.22, score=34.3]} {Human: ENSG00000144674, GOLGA4, golgin A4, [RH, Score=70.1, Expect=1e-11]} {Mouse: ENSMUSG00000038708, Golga4, golgi autoantigen, golgin subfamily a, 4, [RH, Score=71.2, Expect=3e-12]} {Celegans: WBGene00010306, golg-4, GOLGi associated coiled-coil protein homolog, [Score=66.2, Expect=7e-11]} {Smed: dd_Smed_v6_10306_0_1, dd_Smed_v6_10306_0_1, [Score=65.1, Expect=1e-10]} {RNA1509_19374} {RNA1310_3750.2} {RNA815_14892.1} Mlig455_043015 {REF} {Length: 2880} {Pfam: GRIP domain [PF01465.22, score=31.9]} {Human: ENSG00000144674, GOLGA4, golgin A4, [RH, Score=69.3, Expect=2e-11]} {Mouse: ENSMUSG00000038708, Golga4, golgi autoantigen, golgin subfamily a, 4, [RH, Score=71.2, Expect=4e-12]} {Celegans: WBGene00010306, golg-4, GOLGi associated coiled-coil protein homolog, [Score=64.7, Expect=2e-10]} {Smed: dd_Smed_v6_10306_0_1, dd_Smed_v6_10306_0_1, [Score=65.1, Expect=1e-10]} {RNA1509_19374} {RNA1310_3750.1} {RNA815_14892.1} |
| 3. | MligTC455_46008 | 1555 | 32.4 | Mlig455_000229, Mlig455_058487 | Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R5: 1.416/0.00550 |
RPRD1B | 0.966 | - | - | 0.966 | - | - | - | Mlig455_000229 {REF} {Length: 1563} {Pfam: Cell-cycle alteration and expression-elevated protein in tumour [PF16566.7, score=127.6]; CID domain [PF04818.15, score=76.4]} {Human: ENSG00000101413, RPRD1B, regulation of nuclear pre-mRNA domain containing 1B, [Score=94.0, Expect=6e-21]} {Mouse: ENSMUSG00000027651, Rprd1b, regulation of nuclear pre-mRNA domain containing 1B, [Score=94.4, Expect=3e-21]} {Dmel: FBgn0035318, CG9018, [Score=105, Expect=6e-25]} {Celegans: WBGene00015347, cids-1, CID domain-containing protein 1, [Score=57.0, Expect=6e-09]} {Smed: dd_Smed_v6_6829_0_1, dd_Smed_v6_6829_0_1, [Score=103, Expect=1e-24]} {RNA1509_11318} {RNA1310_16311} {RNA815_20078} Mlig455_058487 {REF} {Length: 1510} {Pfam: Cell-cycle alteration and expression-elevated protein in tumour [PF16566.7, score=127.7]; CID domain [PF04818.15, score=76.5]} {Human: ENSG00000101413, RPRD1B, regulation of nuclear pre-mRNA domain containing 1B, [Score=93.6, Expect=8e-21]} {Mouse: ENSMUSG00000027651, Rprd1b, regulation of nuclear pre-mRNA domain containing 1B, [Score=94.0, Expect=4e-21]} {Dmel: FBgn0035318, CG9018, [Score=104, Expect=8e-25]} {Celegans: WBGene00015347, cids-1, CID domain-containing protein 1, [Score=55.8, Expect=2e-08]} {Smed: dd_Smed_v6_6829_0_1, dd_Smed_v6_6829_0_1, [Score=103, Expect=2e-24]} {RNA1509_11318} {RNA1310_16311} {RNA815_20078} |
| 4. | MligTC455_44168 | 4379 | 91.23 | Mlig455_059898 | Neo: Int S/G2/M Age: logFC(26M/2M)=-0.461 Regeneration-upregulated BL: 1.022 Regeneration-enriched BL: 1.022 |
SRSF7 | 0.956 | - | - | - | 0.956 | - | - | Mlig455_059898 {REF} {Length: 1013} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=61.7]; RNA recognition motif [PF16367.7, score=24.0]; Zinc knuckle [PF00098.25, score=22.0]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=19.5]; Zinc knuckle [PF13917.8, score=19.5]} {Human: ENSG00000115875, SRSF7, serine and arginine rich splicing factor 7, [RH, Score=147, Expect=2e-45]} {Mouse: ENSMUSG00000024097, Srsf7, serine/arginine-rich splicing factor 7, [RH, Score=147, Expect=1e-45]} {Dmel: FBgn0028554, x16, x16 splicing factor, [RH, Score=106, Expect=3e-28]} {Celegans: WBGene00013293, Y57G11A.5, [Score=76.6, Expect=2e-18]} {Smed: dd_Smed_v6_2424_0_1, dd_Smed_v6_2424_0_1, [RH, Score=129, Expect=1e-38]} {RNA1509_11562, RNA1509_20255, RNA1509_37237} {RNA1310_34684.1, RNA1509_11562, RNA1509_20255, RNA1509_37237} {RNA1509_11562, RNA1509_20255, RNA1509_37237, RNA815_20639} |