Data search
Results for MligTC455_10475
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_10475 | 218 | 4.53 | Mlig455_031070 | Neo: - Age: Up-Down-Up, logFC(26M/2M)=-0.436 Region-enriched R4: 3.031/0.01874 |
Mlig455_031070 {REF} {Length: 2063} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=31.9]; Family of unknown function (DUF5892) [PF19243.1, score=30.7]; Prokaryotic RING finger family 4 [PF14447.8, score=26.5]} {RNA1509_14834, RNA1509_25883, RNA1509_37209, RNA1509_41308} {RNA1310_50566, RNA1509_14834, RNA1509_25883, RNA1509_37209, RNA1509_41308} {RNA1509_14834, RNA1509_25883, RNA1509_37209, RNA1509_41308, RNA815_20717} |
Cumulative graph for MligTC455_10475
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -4.738 | 3.045 | 0.99966 | 1.00000 | |
| RegionR2 | 1.634 | 3.045 | 0.17560 | 0.52388 | |
| RegionR3 | 2.252 | 3.045 | 0.01752 | 0.21823 | |
| RegionR4 | 3.031 | 3.045 | 0.00213 | 0.01874 | |
| RegionR5 | 0.728 | 3.045 | 0.46464 | 0.82674 | |
| RegionR6 | 1.595 | 3.045 | 0.12863 | 0.64895 | |
| RegionR7 | -0.119 | 3.045 | 0.80549 | 1.00000 | |
| RegionR8 | -4.384 | 3.045 | 1.00000 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.316 | 3.045 | 0.99987 | 1.00000 | |
| RegenerationR2 | 1.069 | 3.045 | 0.09172 | 0.48402 | |
| RegenerationR3 | 0.405 | 3.045 | 0.54019 | 0.87756 | |
| RegenerationR4 | -1.257 | 3.045 | 0.05484 | 0.37644 | |
| RegenerationR5 | 0.933 | 3.045 | 0.13979 | 0.55234 | |
| RegenerationR6 | 0.827 | 3.045 | 0.21486 | 0.55874 | |
| RegenerationBL | 0.945 | 3.045 | 0.55594 | 0.91197 | |
| RegenerationTP | 3.489 | 3.045 | 0.06614 | 0.41496 |
Genes with expression patterns similar to MligTC455_10475
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_10475 | 218 | 4.53 | Mlig455_031070 | Neo: - Age: Up-Down-Up, logFC(26M/2M)=-0.436 Region-enriched R4: 3.031/0.01874 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_031070 {REF} {Length: 2063} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=31.9]; Family of unknown function (DUF5892) [PF19243.1, score=30.7]; Prokaryotic RING finger family 4 [PF14447.8, score=26.5]} {RNA1509_14834, RNA1509_25883, RNA1509_37209, RNA1509_41308} {RNA1310_50566, RNA1509_14834, RNA1509_25883, RNA1509_37209, RNA1509_41308} {RNA1509_14834, RNA1509_25883, RNA1509_37209, RNA1509_41308, RNA815_20717} | |
| 2. | MligTC455_18974 | 229 | 4.78 | Mlig455_019566 | Neo: Germline Age: Down-Down-Up, logFC(26M/2M)=-0.703 Region-specific R4: 3.962 Region-enriched R4: 4.341/0.00000 |
1.744 | - | 0.761 | 0.983 | - | - | - | Mlig455_019566 {REF} {Length: 1633} {RNA1509_35598} {RNA1310_23207.1} {RNA815_10106} | |
| 3. | MligTC455_18975 | 286 | 5.97 | Mlig455_059132 | Neo: Germline Age: - Region-enriched R4: 3.652/0.00001 |
1.709 | 0.749 | - | 0.960 | - | - | - | Mlig455_059132 {REF} {Length: 1515} {RNA1509_35598} {RNA1310_23207.1} {RNA815_10106} | |
| 4. | MligTC455_47859 | 29 | 0.61 | Mlig455_002135 | Neo: - Age: - |
0.958 | - | - | - | - | 0.958 | - | Mlig455_002135 {REF} {Length: 2390} {NoTransDecoderORF} {RNA1509_17003} {RNA1310_75723.1, RNA1509_17003} | |
| 5. | MligTC455_53485 | 300 | 6.24 | Mlig455_052973 | Neo: - Age: Down-Up-Up Region-enriched R4: 3.241/0.00261 |
0.955 | - | - | - | - | 0.955 | - | Mlig455_052973 {REF} {Length: 2470} {RNA1509_54560, RNA1509_56364} {RNA1310_4256, RNA1509_56364} {RNA1509_56364, RNA815_2602} |
Berezikov Lab - 2020-2021 © ERIBA