TomoSeq data search

Data search

Results for MligTC455_10548

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_10548	73	1.52	Mlig455_033483	Neo: - Age: -	PBX4	Mlig455_033483 {REF} {Length: 2127} {Pfam: Homeodomain [PF00046.31, score=45.3]; Homeobox KN domain [PF05920.13, score=44.9]} {Human: ENSG00000105717, PBX4, PBX homeobox 4, [Score=54.3, Expect=3e-07]; ENSG00000237344, PBX2, PBX homeobox 2, [Score=52.4, Expect=1e-06]; ENSG00000236353, PBX2, PBX homeobox 2, [Score=52.4, Expect=1e-06]; ENSG00000232005, PBX2, PBX homeobox 2, [Score=52.4, Expect=1e-06]; ENSG00000204304, PBX2, PBX homeobox 2, [Score=52.4, Expect=1e-06]; ENSG00000206315, PBX2, PBX homeobox 2, [Score=52.4, Expect=1e-06]; ENSG00000225987, PBX2, PBX homeobox 2, [Score=52.4, Expect=1e-06]; ENSG00000224952, PBX2, PBX homeobox 2, [Score=52.4, Expect=1e-06]; ENSG00000185630, PBX1, PBX homeobox 1, [Score=52.0, Expect=2e-06]} {Mouse: ENSMUSG00000034673, Pbx2, pre B cell leukemia homeobox 2, [Score=52.4, Expect=8e-07]; ENSMUSG00000052534, Pbx1, pre B cell leukemia homeobox 1, [Score=52.0, Expect=1e-06]} {Dmel: FBgn0031232, CG11617, [Score=53.1, Expect=2e-07]} {Celegans: WBGene00000461, ceh-40, Homeobox protein ceh-40, [Score=53.9, Expect=1e-07]} {Smed: dd_Smed_v6_7324_0_1, dd_Smed_v6_7324_0_1, [RH, Score=89.7, Expect=4e-19]} {RNA1509_55011} {RNA1310_35412, RNA1509_55011} {RNA1509_55011, RNA815_20886}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_10548

1.52

Mlig455_033483

Neo: -

Age: -

PBX4

Mlig455_033483 {REF} {Length: 2127} {Pfam: Homeodomain [PF00046.31, score=45.3]; Homeobox KN domain [PF05920.13, score=44.9]} {Human: ENSG00000105717, PBX4, PBX homeobox 4, [Score=54.3, Expect=3e-07]; ENSG00000237344, PBX2, PBX homeobox 2, [Score=52.4, Expect=1e-06]; ENSG00000236353, PBX2, PBX homeobox 2, [Score=52.4, Expect=1e-06]; ENSG00000232005, PBX2, PBX homeobox 2, [Score=52.4, Expect=1e-06]; ENSG00000204304, PBX2, PBX homeobox 2, [Score=52.4, Expect=1e-06]; ENSG00000206315, PBX2, PBX homeobox 2, [Score=52.4, Expect=1e-06]; ENSG00000225987, PBX2, PBX homeobox 2, [Score=52.4, Expect=1e-06]; ENSG00000224952, PBX2, PBX homeobox 2, [Score=52.4, Expect=1e-06]; ENSG00000185630, PBX1, PBX homeobox 1, [Score=52.0, Expect=2e-06]} {Mouse: ENSMUSG00000034673, Pbx2, pre B cell leukemia homeobox 2, [Score=52.4, Expect=8e-07]; ENSMUSG00000052534, Pbx1, pre B cell leukemia homeobox 1, [Score=52.0, Expect=1e-06]} {Dmel: FBgn0031232, CG11617, [Score=53.1, Expect=2e-07]} {Celegans: WBGene00000461, ceh-40, Homeobox protein ceh-40, [Score=53.9, Expect=1e-07]} {Smed: dd_Smed_v6_7324_0_1, dd_Smed_v6_7324_0_1, [RH, Score=89.7, Expect=4e-19]} {RNA1509_55011} {RNA1310_35412, RNA1509_55011} {RNA1509_55011, RNA815_20886}

Cumulative graph for MligTC455_10548

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.35	1.59	0.99955	1.00000
RegionR2	-0.597	1.59	0.80810	1.00000
RegionR3	-2.101	1.59	0.99966	1.00000
RegionR4	1.578	1.59	0.32321	0.64071
RegionR5	1.857	1.59	0.09874	0.30247
RegionR6	0.859	1.59	0.38034	0.95981
RegionR7	1.784	1.59	0.23667	0.86046
RegionR8	-1.03	1.59	0.99963	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.821	1.59	0.99998	1.00000
RegenerationR2	1.127	1.59	0.16719	0.60518
RegenerationR3	3.289	1.59	0.03131	0.31600
RegenerationR4	-0.095	1.59	0.88179	1.00000
RegenerationR5	0.504	1.59	0.66050	0.93644
RegenerationR6	1.284	1.59	0.27412	0.62353
RegenerationBL	2.029	1.59	0.23923	0.59298
RegenerationTP	0.736	1.59	0.71098	1.00000

Genes with expression patterns similar to MligTC455_10548

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_10548	73	1.52	Mlig455_033483	Neo: - Age: -	PBX4	4	-	-	1.000	1.000	1.000	1.000	Mlig455_033483 {REF} {Length: 2127} {Pfam: Homeodomain [PF00046.31, score=45.3]; Homeobox KN domain [PF05920.13, score=44.9]} {Human: ENSG00000105717, PBX4, PBX homeobox 4, [Score=54.3, Expect=3e-07]; ENSG00000237344, PBX2, PBX homeobox 2, [Score=52.4, Expect=1e-06]; ENSG00000236353, PBX2, PBX homeobox 2, [Score=52.4, Expect=1e-06]; ENSG00000232005, PBX2, PBX homeobox 2, [Score=52.4, Expect=1e-06]; ENSG00000204304, PBX2, PBX homeobox 2, [Score=52.4, Expect=1e-06]; ENSG00000206315, PBX2, PBX homeobox 2, [Score=52.4, Expect=1e-06]; ENSG00000225987, PBX2, PBX homeobox 2, [Score=52.4, Expect=1e-06]; ENSG00000224952, PBX2, PBX homeobox 2, [Score=52.4, Expect=1e-06]; ENSG00000185630, PBX1, PBX homeobox 1, [Score=52.0, Expect=2e-06]} {Mouse: ENSMUSG00000034673, Pbx2, pre B cell leukemia homeobox 2, [Score=52.4, Expect=8e-07]; ENSMUSG00000052534, Pbx1, pre B cell leukemia homeobox 1, [Score=52.0, Expect=1e-06]} {Dmel: FBgn0031232, CG11617, [Score=53.1, Expect=2e-07]} {Celegans: WBGene00000461, ceh-40, Homeobox protein ceh-40, [Score=53.9, Expect=1e-07]} {Smed: dd_Smed_v6_7324_0_1, dd_Smed_v6_7324_0_1, [RH, Score=89.7, Expect=4e-19]} {RNA1509_55011} {RNA1310_35412, RNA1509_55011} {RNA1509_55011, RNA815_20886}
2.	MligTC455_05663	15	0.31	Mlig455_047269	Neo: Int S/G2/M Age: -		0.978	-	-	-	-	0.978	-	Mlig455_047269 {REF} {Length: 842} {NoTransDecoderORF} {RNA1310_133680}
3.	MligTC455_31773	27	0.57	Mlig455_026260	Neo: - Age: -		0.95	-	-	0.950	-	-	-	Mlig455_026260 {REF} {Length: 1941} {TRANSSPLICED} {Pfam: Maintenance of mitochondrial structure and function [PF13012.8, score=19.8]} {RNA1509_23300} {RNA1310_14145.1} {RNA815_3900.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts