TomoSeq data search

Data search

Results for MligTC455_10684

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_10684	5	0.10	Mlig455_000348	Neo: - Age: -		Mlig455_000348 {REF} {Length: 1869} {Pfam: Innexin [PF00876.20, score=261.1]} {Dmel: FBgn0027108, Inx2, Innexin 2, [Score=78.2, Expect=2e-15]} {Celegans: WBGene00006749, unc-9, Innexin unc-9, [Score=170, Expect=2e-47]} {Smed: dd_Smed_v6_11501_0_1, dd_Smed_v6_11501_0_1, [Score=240, Expect=3e-73]} {RNA1509_42287} {RNA1310_9546} {RNA815_23307}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_10684

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_10684

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_08709	35	0.72	Mlig455_057110	Neo: - Age: -	PCDHA13	1	-	1.000	-	-	-	-	Mlig455_057110 {REF} {Length: 4248} {Pfam: Cadherin domain [PF00028.19, score=213.8]; Cadherin-like [PF16184.7, score=23.5]} {Human: ENSG00000239389, PCDHA13, protocadherin alpha 13, [Score=221, Expect=6e-59]; ENSG00000102290, PCDH11X, protocadherin 11 X-linked, [Score=217, Expect=1e-56]; ENSG00000099715, PCDH11Y, protocadherin 11 Y-linked, [Score=216, Expect=1e-56]} {Mouse: ENSMUSG00000034755, Pcdh11x, protocadherin 11 X-linked, [Score=214, Expect=7e-56]; ENSMUSG00000051375, Pcdh1, protocadherin 1, [Score=204, Expect=3e-53]} {Dmel: FBgn0001075, ft, fat, [Score=152, Expect=1e-36]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=107, Expect=3e-23]} {Smed: dd_Smed_v6_13040_0_1, dd_Smed_v6_13040_0_1, [Score=301, Expect=6e-86]} {RNA1509_59255} {RNA1310_30001} {RNA815_31666}
2.	MligTC455_10684	5	0.1	Mlig455_000348	Neo: - Age: -		1	-	1.000	-	-	-	-	Mlig455_000348 {REF} {Length: 1869} {Pfam: Innexin [PF00876.20, score=261.1]} {Dmel: FBgn0027108, Inx2, Innexin 2, [Score=78.2, Expect=2e-15]} {Celegans: WBGene00006749, unc-9, Innexin unc-9, [Score=170, Expect=2e-47]} {Smed: dd_Smed_v6_11501_0_1, dd_Smed_v6_11501_0_1, [Score=240, Expect=3e-73]} {RNA1509_42287} {RNA1310_9546} {RNA815_23307}
3.	MligTC455_34112	65	1.35	Mlig455_013791, Mlig455_013923	Neo: Irradiation Age: logFC(26M/2M)=0.605 Region-enriched R5: 3.535/0.00182	AC243734.1, CHRNA7	0.962	-	0.962	-	-	-	-	Mlig455_013791 {REF} {Length: 2292} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=165.3]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=94.5]} {Human: ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=239, Expect=3e-71]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=239, Expect=3e-71]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=238, Expect=5e-71]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=238, Expect=3e-71]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=218, Expect=5e-63]} {Celegans: WBGene00000058, acr-19, AcetylCholine Receptor; Acetylcholine receptor (63.2 kD) (Acr-19), [Score=237, Expect=3e-70]} {Smed: dd_Smed_v6_8058_0_1, dd_Smed_v6_8058_0_1, [Score=211, Expect=7e-61]} {RNA1310_24918} {RNA815_19482} Mlig455_013923 {REF} {Length: 5041} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=163.0]; Ankyrin repeats (3 copies) [PF12796.9, score=117.3]; Ankyrin repeats (many copies) [PF13637.8, score=95.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=94.4]; Ankyrin repeat [PF13606.8, score=86.8]; Ankyrin repeats (many copies) [PF13857.8, score=84.0]; Ankyrin repeat [PF00023.32, score=79.8]} {Human: ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=240, Expect=2e-68]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=240, Expect=2e-68]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=239, Expect=5e-68]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=240, Expect=2e-68]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=219, Expect=7e-61]} {Celegans: WBGene00000058, acr-19, AcetylCholine Receptor; Acetylcholine receptor (63.2 kD) (Acr-19), [Score=238, Expect=2e-67]} {Smed: dd_Smed_v6_23922_0_1, dd_Smed_v6_23922_0_1, [Score=213, Expect=1e-58]} {RNA1509_8073} {RNA1310_2090.2} {RNA815_994.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_08709

0.72

Mlig455_057110

Neo: -

Age: -

PCDHA13

1.000

Mlig455_057110 {REF} {Length: 4248} {Pfam: Cadherin domain [PF00028.19, score=213.8]; Cadherin-like [PF16184.7, score=23.5]} {Human: ENSG00000239389, PCDHA13, protocadherin alpha 13, [Score=221, Expect=6e-59]; ENSG00000102290, PCDH11X, protocadherin 11 X-linked, [Score=217, Expect=1e-56]; ENSG00000099715, PCDH11Y, protocadherin 11 Y-linked, [Score=216, Expect=1e-56]} {Mouse: ENSMUSG00000034755, Pcdh11x, protocadherin 11 X-linked, [Score=214, Expect=7e-56]; ENSMUSG00000051375, Pcdh1, protocadherin 1, [Score=204, Expect=3e-53]} {Dmel: FBgn0001075, ft, fat, [Score=152, Expect=1e-36]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=107, Expect=3e-23]} {Smed: dd_Smed_v6_13040_0_1, dd_Smed_v6_13040_0_1, [Score=301, Expect=6e-86]} {RNA1509_59255} {RNA1310_30001} {RNA815_31666}

MligTC455_10684

0.1

Mlig455_000348

Neo: -

Age: -

1.000

MligTC455_34112

1.35

Mlig455_013791, Mlig455_013923

Neo: Irradiation

Age: logFC(26M/2M)=0.605

Region-enriched R5: 3.535/0.00182

AC243734.1, CHRNA7

0.962

Mlig455_013791 {REF} {Length: 2292} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=165.3]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=94.5]} {Human: ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=239, Expect=3e-71]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=239, Expect=3e-71]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=238, Expect=5e-71]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=238, Expect=3e-71]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=218, Expect=5e-63]} {Celegans: WBGene00000058, acr-19, AcetylCholine Receptor; Acetylcholine receptor (63.2 kD) (Acr-19), [Score=237, Expect=3e-70]} {Smed: dd_Smed_v6_8058_0_1, dd_Smed_v6_8058_0_1, [Score=211, Expect=7e-61]} {RNA1310_24918} {RNA815_19482}

Mlig455_013923 {REF} {Length: 5041} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=163.0]; Ankyrin repeats (3 copies) [PF12796.9, score=117.3]; Ankyrin repeats (many copies) [PF13637.8, score=95.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=94.4]; Ankyrin repeat [PF13606.8, score=86.8]; Ankyrin repeats (many copies) [PF13857.8, score=84.0]; Ankyrin repeat [PF00023.32, score=79.8]} {Human: ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=240, Expect=2e-68]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=240, Expect=2e-68]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=239, Expect=5e-68]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=240, Expect=2e-68]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=219, Expect=7e-61]} {Celegans: WBGene00000058, acr-19, AcetylCholine Receptor; Acetylcholine receptor (63.2 kD) (Acr-19), [Score=238, Expect=2e-67]} {Smed: dd_Smed_v6_23922_0_1, dd_Smed_v6_23922_0_1, [Score=213, Expect=1e-58]} {RNA1509_8073} {RNA1310_2090.2} {RNA815_994.1}