Data search


search
Exact
Search

Results for MligTC455_10693

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_10693 8 0.16 Mlig455_008068

Neo: -

Age: -

Mlig455_008068 {REF} {Length: 394} {NoTransDecoderORF} {RNA1310_76402}

Cumulative graph for MligTC455_10693

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_10693

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_10693 8 0.16 Mlig455_008068

Neo: -

Age: -

1 - - - - 1.000 - Mlig455_008068 {REF} {Length: 394} {NoTransDecoderORF} {RNA1310_76402}
2. MligTC455_56992 8 0.17 Mlig455_009612

Neo: -

Age: -

1 - - - - 1.000 - Mlig455_009612 {REF} {Length: 162} {NoTransDecoderORF}
3. MligTC455_57487 5 0.11 Mlig455_044295

Neo: -

Age: -

1 - - - - 1.000 - Mlig455_044295 {REF} {Length: 145} {NoTransDecoderORF} {RNA1310_71331}
4. MligTC455_03027 14 0.28 Mlig455_026331

Neo: -

Age: -

0.997 - - - - 0.997 - Mlig455_026331 {REF} {Length: 667} {NoTransDecoderORF}
5. MligTC455_11931 892 18.58 Mlig455_023269

Neo: -

Age: -

0.994 - - - - 0.994 - Mlig455_023269 {REF} {Length: 1891} {RNA1509_48039} {RNA1310_25334} {RNA815_22354}
6. MligTC455_36195 47 0.97 Mlig455_020257

Neo: Irradiation

Age: -

Region-enriched R4: 6.754/0.00000

0.991 - - - - 0.991 - Mlig455_020257 {REF} {Length: 1435} {Pfam: Domain of unknown function (DUF4419) [PF14388.8, score=72.6]} {RNA1509_22232} {RNA1310_24935, RNA1509_22232} {RNA1509_22232, RNA815_11803}
7. MligTC455_40298 46 0.95 Mlig455_029177

Neo: Germline

Age: Up-Down-Up

Region-enriched R4: 5.131/0.00086

0.981 - - - - 0.981 - Mlig455_029177 {REF} {Length: 1122} {RNA1509_21847} {RNA1310_36586} {RNA815_19114}
8. MligTC455_26107 18 0.38 Mlig455_009308

Neo: -

Age: -

0.977 - - - - 0.977 - Mlig455_009308 {REF} {Length: 2551} {RNA1509_41127} {RNA1310_28088} {RNA815_5881.1}
9. MligTC455_11065 61 1.27 Mlig455_044644

Neo: -

Age: -

HSD3B2 0.974 - - - - 0.974 - Mlig455_044644 {REF} {Length: 2032} {Pfam: 3-beta hydroxysteroid dehydrogenase/isomerase family [PF01073.21, score=205.0]; NAD dependent epimerase/dehydratase family [PF01370.23, score=80.9]; Male sterility protein [PF07993.14, score=58.4]; Polysaccharide biosynthesis protein [PF02719.17, score=50.3]; GDP-mannose 4,6 dehydratase [PF16363.7, score=46.4]; NAD(P)H-binding [PF13460.8, score=31.7]; RmlD substrate binding domain [PF04321.19, score=30.6]} {Human: ENSG00000203859, HSD3B2, hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2, [RH, Score=160, Expect=5e-45]; ENSG00000203857, HSD3B1, hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1, [RH, Score=158, Expect=2e-44]} {Mouse: ENSMUSG00000063730, Hsd3b2, hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2, [RH, Score=146, Expect=5e-40]; ENSMUSG00000027871, Hsd3b1, hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1, [RH, Score=145, Expect=8e-40]; ENSMUSG00000062410, Hsd3b3, hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 3, [RH, Score=144, Expect=5e-39]; ENSMUSG00000027869, Hsd3b6, hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 6, [RH, Score=140, Expect=6e-38]; ENSMUSG00000042289, Hsd3b7, hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7, [RH, Score=139, Expect=2e-37]} {Dmel: FBgn0036698, CG7724, [RH, Score=136, Expect=3e-36]} {Celegans: WBGene00017429, F13D11.4, [Score=55.5, Expect=2e-08]} {RNA1509_60032} {RNA1310_18816.1} {RNA815_10002}
10. MligTC455_10261 37 0.76 Mlig455_049705

Neo: -

Age: -

0.972 - - - - 0.972 - Mlig455_049705 {REF} {Length: 1356} {RNA1310_32241.1} {RNA815_36072}
11. MligTC455_36666 222 4.63 Mlig455_008425

Neo: -

Age: -

0.972 - - - - 0.972 - Mlig455_008425 {REF} {Length: 1550} {Pfam: Soluble NSF attachment protein, SNAP [PF14938.8, score=111.3]} {Celegans: WBGene00017016, snap-1, SNAP (Soluble NSF Attachment Protein) homolog, [Score=62.0, Expect=1e-10]} {RNA1509_57500} {RNA1310_38108} {RNA815_17993}
12. MligTC455_14395 59 1.23 Mlig455_057259

Neo: -

Age: logFC(26M/2M)=2.782

Region-enriched R4: 5.399/0.02503

TRPM3 0.97 - - - - 0.970 - Mlig455_057259 {REF} {Length: 3226} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=36.3]; Ankyrin repeats (many copies) [PF13637.8, score=27.7]; Ankyrin repeat [PF00023.32, score=19.0]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=78.2, Expect=7e-14]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=77.4, Expect=7e-14]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=98.2, Expect=9e-21]} {RNA1310_13431} {RNA815_14236}
13. MligTC455_22354 65 1.35 Mlig455_009895, Mlig455_057001, Mlig455_057061

Neo: -

Age: logFC(26M/2M)=0.575

EIF2B3, PPM1A 0.968 - - - - 0.968 -

Mlig455_009895 {REF} {Length: 1696} {TRANSSPLICED} {Pfam: MobA-like NTP transferase domain [PF12804.9, score=34.3]; Nucleotidyl transferase [PF00483.25, score=31.3]; Domain of unknown function (DUF4954) [PF16314.7, score=23.8]; Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=20.2]} {Human: ENSG00000070785, EIF2B3, eukaryotic translation initiation factor 2B subunit gamma, [Score=111, Expect=5e-26]} {Mouse: ENSMUSG00000028683, Eif2b3, eukaryotic translation initiation factor 2B, subunit 3, [Score=124, Expect=1e-30]} {Dmel: FBgn0034029, eIF2Bgamma, eukaryotic translation initiation factor 2B subunit gamma, [RH, Score=139, Expect=4e-36]} {Celegans: WBGene00004090, eif-2Bgamma, Probable translation initiation factor eIF-2B subunit gamma, [RH, Score=72.0, Expect=2e-13]} {RNA1509_11665} {RNA1310_17674} {RNA815_11116}

Mlig455_057001 {REF} {Length: 983} {Pfam: Domain of unknown function (DUF4954) [PF16314.7, score=25.6]; Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=23.3]} {Dmel: FBgn0034029, eIF2Bgamma, eukaryotic translation initiation factor 2B subunit gamma, [Score=73.6, Expect=2e-14]} {Celegans: WBGene00004090, eif-2Bgamma, Probable translation initiation factor eIF-2B subunit gamma, [RH, Score=71.2, Expect=8e-14]} {RNA1509_11665} {RNA1310_17674} {RNA815_11116}

Mlig455_057061 {REF} {Length: 1331} {Pfam: Domain of unknown function (DUF4954) [PF16314.7, score=24.3]; Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=21.9]} {Human: ENSG00000100614, PPM1A, protein phosphatase, Mg2+/Mn2+ dependent 1A, [Score=50.1, Expect=4e-07]; ENSG00000138032, PPM1B, protein phosphatase, Mg2+/Mn2+ dependent 1B, [Score=48.9, Expect=1e-05]; ENSG00000285542, AC013717.1, novel protein, PPM1B-SLC3A1 readthrough, [Score=48.5, Expect=1e-05]} {Mouse: ENSMUSG00000021096, Ppm1a, protein phosphatase 1A, magnesium dependent, alpha isoform, [Score=52.0, Expect=7e-07]; ENSMUSG00000061130, Ppm1b, protein phosphatase 1B, magnesium dependent, beta isoform, [Score=49.7, Expect=4e-06]} {Dmel: FBgn0034029, eIF2Bgamma, eukaryotic translation initiation factor 2B subunit gamma, [Score=75.1, Expect=2e-14]} {Celegans: WBGene00004090, eif-2Bgamma, Probable translation initiation factor eIF-2B subunit gamma, [RH, Score=71.2, Expect=2e-13]} {Smed: dd_Smed_v6_2275_0_1, dd_Smed_v6_2275_0_1, [Score=61.6, Expect=2e-10]} {RNA1509_11665} {RNA1310_17674} {RNA815_11116}
14. MligTC455_10990 93 1.93 Mlig455_004652

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.710

Region-enriched R4: 3.936/0.00003

0.964 - - - - 0.964 - Mlig455_004652 {REF} {Length: 835} {RNA1509_31347} {RNA1310_47669} {RNA815_27018}
15. MligTC455_11773 18 0.38 Mlig455_064680

Neo: -

Age: -

0.963 - - - - 0.963 - Mlig455_064680 {REF} {Length: 221} {NoTransDecoderORF}
16. MligTC455_48767 7 0.15 Mlig455_004539

Neo: -

Age: -

SEC24A 0.962 - - - - 0.962 - Mlig455_004539 {REF} {Length: 6876} {TRANSSPLICED} {Pfam: Sec23/Sec24 trunk domain [PF04811.17, score=116.9]; Sec23/Sec24 beta-sandwich domain [PF08033.14, score=52.6]; Sec23/Sec24 helical domain [PF04815.17, score=51.2]; Sec23/Sec24 zinc finger [PF04810.17, score=48.8]} {Human: ENSG00000113615, SEC24A, SEC24 homolog A, COPII coat complex component, [Score=550, Expect=1e-168]; ENSG00000138802, SEC24B, SEC24 homolog B, COPII coat complex component, [Score=543, Expect=1e-164]} {Mouse: ENSMUSG00000036391, Sec24a, Sec24 related gene family, member A (S. cerevisiae), [Score=541, Expect=9e-166]; ENSMUSG00000001052, Sec24b, Sec24 related gene family, member B (S. cerevisiae), [Score=523, Expect=2e-157]} {Dmel: FBgn0033460, Sec24AB, Secretory 24AB, [Score=493, Expect=5e-148]} {Celegans: WBGene00004756, sec-24.2, Yeast SEC homolog, [Score=492, Expect=7e-150]} {Smed: dd_Smed_v6_3760_0_1, dd_Smed_v6_3760_0_1, [Score=488, Expect=3e-149]} {RNA1509_27618, RNA1509_35779} {RNA1310_9489.1, RNA1509_27618} {RNA1509_27618, RNA815_10954}
17. MligTC455_10132 10 0.2 Mlig455_067128

Neo: -

Age: -

0.955 - - - - 0.955 - Mlig455_067128 {REF} {Length: 2015}
18. MligTC455_17501 114 2.37 Mlig455_002481

Neo: -

Age: -

0.953 - - - - 0.953 - Mlig455_002481 {REF} {Length: 2949} {RNA1509_41440} {RNA1310_26404.1, RNA1509_41440} {RNA1509_41440, RNA815_11074.1}
19. MligTC455_51350 51 1.05 Mlig455_040822, Mlig455_049178

Neo: Neoblast

Age: -

Regeneration-upregulated BL: 5.023

Regeneration-enriched BL: 5.023

HIST4H4 0.953 - - - - 0.953 -

Mlig455_040822 {REF} {Length: 1558} {Pfam: Centromere kinetochore component CENP-T histone fold [PF15511.8, score=33.4]; TATA box binding protein associated factor (TAF) [PF02969.19, score=25.4]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=23.3]; CENP-S protein [PF15630.8, score=23.3]; Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=21.2]} {Human: ENSG00000197837, HIST4H4, histone cluster 4 H4, [RH, Score=199, Expect=1e-67]; ENSG00000274618, HIST1H4F, histone cluster 1 H4 family member f, [RH, Score=199, Expect=1e-67]; ENSG00000197238, HIST1H4J, histone cluster 1 H4 family member j, [RH, Score=199, Expect=1e-67]; ENSG00000270882, HIST2H4A, histone cluster 2 H4 family member a, [RH, Score=199, Expect=1e-67]; ENSG00000276180, HIST1H4I, histone cluster 1 H4 family member i, [RH, Score=199, Expect=1e-67]; ENSG00000158406, HIST1H4H, histone cluster 1 H4 family member h, [RH, Score=199, Expect=1e-67]; ENSG00000276966, HIST1H4E, histone cluster 1 H4 family member e, [RH, Score=199, Expect=1e-67]; ENSG00000273542, HIST1H4K, histone cluster 1 H4 family member k, [RH, Score=199, Expect=1e-67]; ENSG00000278637, HIST1H4A, histone cluster 1 H4 family member a, [RH, Score=199, Expect=1e-67]; ENSG00000275126, HIST1H4L, histone cluster 1 H4 family member l, [RH, Score=199, Expect=1e-67]; ENSG00000277157, HIST1H4D, histone cluster 1 H4 family member d, [RH, Score=199, Expect=1e-67]; ENSG00000197061, HIST1H4C, histone cluster 1 H4 family member c, [RH, Score=199, Expect=1e-67]; ENSG00000278705, HIST1H4B, histone cluster 1 H4 family member b, [RH, Score=199, Expect=1e-67]; ENSG00000270276, HIST2H4B, histone cluster 2 H4 family member b, [RH, Score=199, Expect=1e-67]} {Mouse: ENSMUSG00000061482, Hist1h4d, histone cluster 1, H4d, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060639, Hist1h4i, histone cluster 1, H4i, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069266, Hist1h4b, histone cluster 1, H4b, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060981, Hist1h4h, histone cluster 1, H4h, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069306, Hist1h4m, histone cluster 1, H4m, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060678, Hist1h4c, histone cluster 1, H4c, [RH, Score=199, Expect=1e-67]; ENSMUSG00000091405, Hist2h4, histone cluster 2, H4, [RH, Score=199, Expect=1e-67]; ENSMUSG00000096010, Hist4h4, histone cluster 4, H4, [RH, Score=199, Expect=1e-67]; ENSMUSG00000064288, Hist1h4k, histone cluster 1, H4k, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069274, Hist1h4f, histone cluster 1, H4f, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060093, Hist1h4a, histone cluster 1, H4a, [RH, Score=199, Expect=1e-67]; ENSMUSG00000067455, Hist1h4j, histone cluster 1, H4j, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069305, Hist1h4n, histone cluster 1, H4n, [RH, Score=199, Expect=1e-67]} {Dmel: FBgn0013981, His4r, Histone H4 replacement, [RH, Score=197, Expect=2e-67]} {Celegans: WBGene00001920, his-46, Histone H4, [RH, Score=197, Expect=3e-67]} {Smed: dd_Smed_v6_5700_0_1, dd_Smed_v6_5700_0_1, [RH, Score=199, Expect=4e-68]} {RNA1509_3331} {RNA1310_47788.1} {RNA815_23950.2}

Mlig455_049178 {REF} {Length: 775} {Pfam: Centromere kinetochore component CENP-T histone fold [PF15511.8, score=33.4]; TATA box binding protein associated factor (TAF) [PF02969.19, score=25.4]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=23.3]; CENP-S protein [PF15630.8, score=23.3]; Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=21.2]} {Human: ENSG00000197837, HIST4H4, histone cluster 4 H4, [RH, Score=199, Expect=1e-67]; ENSG00000274618, HIST1H4F, histone cluster 1 H4 family member f, [RH, Score=199, Expect=1e-67]; ENSG00000197238, HIST1H4J, histone cluster 1 H4 family member j, [RH, Score=199, Expect=1e-67]; ENSG00000270882, HIST2H4A, histone cluster 2 H4 family member a, [RH, Score=199, Expect=1e-67]; ENSG00000276180, HIST1H4I, histone cluster 1 H4 family member i, [RH, Score=199, Expect=1e-67]; ENSG00000158406, HIST1H4H, histone cluster 1 H4 family member h, [RH, Score=199, Expect=1e-67]; ENSG00000276966, HIST1H4E, histone cluster 1 H4 family member e, [RH, Score=199, Expect=1e-67]; ENSG00000273542, HIST1H4K, histone cluster 1 H4 family member k, [RH, Score=199, Expect=1e-67]; ENSG00000278637, HIST1H4A, histone cluster 1 H4 family member a, [RH, Score=199, Expect=1e-67]; ENSG00000275126, HIST1H4L, histone cluster 1 H4 family member l, [RH, Score=199, Expect=1e-67]; ENSG00000277157, HIST1H4D, histone cluster 1 H4 family member d, [RH, Score=199, Expect=1e-67]; ENSG00000197061, HIST1H4C, histone cluster 1 H4 family member c, [RH, Score=199, Expect=1e-67]; ENSG00000278705, HIST1H4B, histone cluster 1 H4 family member b, [RH, Score=199, Expect=1e-67]; ENSG00000270276, HIST2H4B, histone cluster 2 H4 family member b, [RH, Score=199, Expect=1e-67]} {Mouse: ENSMUSG00000061482, Hist1h4d, histone cluster 1, H4d, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060639, Hist1h4i, histone cluster 1, H4i, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069266, Hist1h4b, histone cluster 1, H4b, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060981, Hist1h4h, histone cluster 1, H4h, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069306, Hist1h4m, histone cluster 1, H4m, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060678, Hist1h4c, histone cluster 1, H4c, [RH, Score=199, Expect=1e-67]; ENSMUSG00000091405, Hist2h4, histone cluster 2, H4, [RH, Score=199, Expect=1e-67]; ENSMUSG00000096010, Hist4h4, histone cluster 4, H4, [RH, Score=199, Expect=1e-67]; ENSMUSG00000064288, Hist1h4k, histone cluster 1, H4k, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069274, Hist1h4f, histone cluster 1, H4f, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060093, Hist1h4a, histone cluster 1, H4a, [RH, Score=199, Expect=1e-67]; ENSMUSG00000067455, Hist1h4j, histone cluster 1, H4j, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069305, Hist1h4n, histone cluster 1, H4n, [RH, Score=199, Expect=1e-67]} {Dmel: FBgn0013981, His4r, Histone H4 replacement, [RH, Score=197, Expect=2e-67]} {Celegans: WBGene00001920, his-46, Histone H4, [RH, Score=197, Expect=3e-67]} {Smed: dd_Smed_v6_5700_0_1, dd_Smed_v6_5700_0_1, [RH, Score=199, Expect=4e-68]} {RNA1509_21430} {RNA1310_47788.1} {RNA815_23950.2}
20. MligTC455_05000 16 0.33 Mlig455_028316

Neo: -

Age: -

0.952 - - - - 0.952 - Mlig455_028316 {REF} {Length: 823} {NoTransDecoderORF}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA