Data search


search
Exact
Search

Results for MligTC455_10955

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_10955 36 0.74 Mlig455_015919

Neo: -

Age: -

Mlig455_015919 {REF} {Length: 1748} {RNA1509_28510} {RNA1310_34418} {RNA815_20591}

Cumulative graph for MligTC455_10955

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.999 0.947 0.99967 1.00000
RegionR2 -0.755 0.947 0.99983 1.00000
RegionR3 0.84 0.947 0.99985 1.00000
RegionR4 0.823 0.947 0.99980 1.00000
RegionR5 1.067 0.947 0.99986 1.00000
RegionR6 -0.169 0.947 0.99993 1.00000
RegionR7 -0.499 0.947 1.00000 1.00000
RegionR8 -0.308 0.947 0.99995 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.897 0.947 0.99992 1.00000
RegenerationR2 3.259 0.947 0.26781 0.71371
RegenerationR3 1.7 0.947 0.09520 0.49581
RegenerationR4 1.5 0.947 0.27122 0.71719
RegenerationR5 1.037 0.947 0.34091 0.75837
RegenerationR6 2.508 0.947 0.17093 0.50235
RegenerationBL 4.287 0.947 0.12155 0.41328
RegenerationTP -0.689 0.947 0.99993 1.00000


Genes with expression patterns similar to MligTC455_10955

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_10955 36 0.74 Mlig455_015919

Neo: -

Age: -

2 - - - 1.000 1.000 - Mlig455_015919 {REF} {Length: 1748} {RNA1509_28510} {RNA1310_34418} {RNA815_20591}
2. MligTC455_10957 33 0.69 Mlig455_059679

Neo: -

Age: -

1.98 - - - 1.000 0.980 - Mlig455_059679 {REF} {Length: 995} {NoTransDecoderORF} {RNA1509_36097} {RNA1310_34418} {RNA815_20591}
3. MligTC455_13408 50 1.05 Mlig455_023158, Mlig455_023242

Neo: -

Age: -

LRRC45 0.953 - - - 0.953 - -

Mlig455_023158 {REF} {Length: 4137} {Pfam: Leucine Rich repeat [PF13516.8, score=28.4]; Protein of unknown function (DUF465) [PF04325.15, score=18.7]} {Human: ENSG00000169683, LRRC45, leucine rich repeat containing 45, [Score=259, Expect=3e-77]} {Mouse: ENSMUSG00000025145, Lrrc45, leucine rich repeat containing 45, [Score=256, Expect=3e-76]} {Smed: dd_Smed_v6_9495_0_1, dd_Smed_v6_9495_0_1, [Score=266, Expect=6e-80]} {RNA1509_9663} {RNA1310_9890.1} {RNA815_3417}

Mlig455_023242 {REF} {Length: 1433} {Pfam: Leucine Rich repeat [PF13516.8, score=28.4]; Protein of unknown function (DUF465) [PF04325.15, score=18.7]} {Human: ENSG00000169683, LRRC45, leucine rich repeat containing 45, [Score=259, Expect=3e-77]} {Mouse: ENSMUSG00000025145, Lrrc45, leucine rich repeat containing 45, [Score=256, Expect=3e-76]} {Smed: dd_Smed_v6_9495_0_1, dd_Smed_v6_9495_0_1, [Score=266, Expect=6e-80]} {RNA1509_9663} {RNA1310_9890.1} {RNA815_3417}
4. MligTC455_27054 1268 26.42 Mlig455_010518, Mlig455_061853

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.418

Region-enriched R8: 2.038/0.00265

EML2 0.95 - - - - 0.950 -

Mlig455_010518 {REF} {Length: 3768} {Pfam: Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=41.6]; Doublecortin [PF03607.19, score=40.3]; HELP motif [PF03451.16, score=33.6]; WD domain, G-beta repeat [PF00400.34, score=30.9]; PQQ-like domain [PF13360.8, score=20.8]} {Human: ENSG00000125746, EML2, echinoderm microtubule associated protein like 2, [Score=285, Expect=5e-82]; ENSG00000066629, EML1, echinoderm microtubule associated protein like 1, [Score=276, Expect=7e-79]} {Mouse: ENSMUSG00000040811, Eml2, echinoderm microtubule associated protein like 2, [Score=290, Expect=7e-84]; ENSMUSG00000058070, Eml1, echinoderm microtubule associated protein like 1, [Score=285, Expect=5e-82]} {Dmel: FBgn0259099, DCX-EMAP, Doublecortin-domain-containing echinoderm-microtubule-associated protein, [Score=312, Expect=4e-92]} {Smed: dd_Smed_v6_21299_0_4, dd_Smed_v6_21299_0_4, [Score=253, Expect=7e-73]} {RNA1509_17153} {RNA1310_1430.1} {RNA815_690.1}

Mlig455_061853 {REF} {Length: 4069} {Pfam: Doublecortin [PF03607.19, score=48.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=44.7]; HELP motif [PF03451.16, score=32.3]; WD domain, G-beta repeat [PF00400.34, score=29.2]} {Human: ENSG00000125746, EML2, echinoderm microtubule associated protein like 2, [Score=283, Expect=5e-81]; ENSG00000066629, EML1, echinoderm microtubule associated protein like 1, [Score=276, Expect=1e-78]} {Mouse: ENSMUSG00000040811, Eml2, echinoderm microtubule associated protein like 2, [Score=288, Expect=7e-83]; ENSMUSG00000058070, Eml1, echinoderm microtubule associated protein like 1, [Score=284, Expect=1e-81]} {Dmel: FBgn0259099, DCX-EMAP, Doublecortin-domain-containing echinoderm-microtubule-associated protein, [Score=310, Expect=1e-90]} {Celegans: WBGene00006993, zyg-8, Serine/threonine-protein kinase zyg-8, [Score=60.1, Expect=8e-09]} {Smed: dd_Smed_v6_958_0_1, dd_Smed_v6_958_0_1, [Score=251, Expect=1e-70]} {RNA1509_17153} {RNA1310_1430.1, RNA1509_17153} {RNA1509_17153, RNA815_690.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA