Data search


search
Exact
Search

Results for MligTC455_10981

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_10981 49 1.02 Mlig455_069775

Neo: -

Age: -

Mlig455_069775 {REF} {Length: 3193} {NoTransDecoderORF} {RNA1509_9634} {RNA1310_61162} {RNA815_10879.1}

Cumulative graph for MligTC455_10981

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.33 1.366 0.99999 1.00000
RegionR2 -0.988 1.366 0.99988 1.00000
RegionR3 0.306 1.366 0.99999 1.00000
RegionR4 0.742 1.366 0.99996 1.00000
RegionR5 0.583 1.366 1.00000 1.00000
RegionR6 -0.235 1.366 0.99998 1.00000
RegionR7 -0.312 1.366 1.00000 1.00000
RegionR8 0.234 1.366 0.99997 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.876 1.366 1.00000 1.00000
RegenerationR2 4.118 1.366 0.00361 0.09247
RegenerationR3 3.43 1.366 0.05173 0.39408
RegenerationR4 3.112 1.366 0.03146 0.28622
RegenerationR5 3.547 1.366 0.01467 0.21073
RegenerationR6 5.049 1.366 0.00506 0.08594
RegenerationBL -1.073 1.366 0.99996 1.00000
RegenerationTP 2.429 1.366 0.40371 0.83179


Genes with expression patterns similar to MligTC455_10981

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_10981 49 1.02 Mlig455_069775

Neo: -

Age: -

3 - - - 1.000 1.000 1.000 Mlig455_069775 {REF} {Length: 3193} {NoTransDecoderORF} {RNA1509_9634} {RNA1310_61162} {RNA815_10879.1}
2. MligTC455_32204 753 15.68 Mlig455_051618

Neo: -

Age: Down-Up-Up

SURF1 0.963 - - - 0.963 - - Mlig455_051618 {REF} {Length: 1070} {TRANSSPLICED} {Pfam: SURF1 family [PF02104.17, score=145.7]} {Human: ENSG00000280627, SURF1, SURF1, cytochrome c oxidase assembly factor, [RH, Score=165, Expect=3e-48]; ENSG00000148290, SURF1, SURF1, cytochrome c oxidase assembly factor, [RH, Score=165, Expect=3e-48]} {Mouse: ENSMUSG00000015790, Surf1, surfeit gene 1, [RH, Score=169, Expect=3e-50]} {Dmel: FBgn0029117, Surf1, Surfeit 1, [RH, Score=164, Expect=3e-48]} {Celegans: WBGene00004787, sft-1, SURF1-like protein, [RH, Score=151, Expect=3e-43]} {Smed: dd_Smed_v6_8214_0_1, dd_Smed_v6_8214_0_1, [RH, Score=139, Expect=3e-39]} {RNA1509_23000, RNA1509_43248} {RNA1310_30329, RNA1509_23000, RNA1509_43248} {RNA1509_23000, RNA1509_43248, RNA815_15368.1}
3. MligTC455_50466 103 2.14 Mlig455_023726

Neo: -

Age: logFC(26M/2M)=0.285

PPTC7 0.953 - - - 0.953 - - Mlig455_023726 {REF} {Length: 4924} {TRANSSPLICED} {Pfam: Stage II sporulation protein E (SpoIIE) [PF07228.14, score=55.9]; Protein phosphatase 2C [PF00481.23, score=22.3]} {Human: ENSG00000196850, PPTC7, PTC7 protein phosphatase homolog, [RH, Score=110, Expect=2e-27]} {Mouse: ENSMUSG00000038582, Pptc7, PTC7 protein phosphatase homolog, [RH, Score=110, Expect=2e-27]} {Dmel: FBgn0035228, CG12091, [RH, Score=118, Expect=2e-30]} {Celegans: WBGene00012362, W09D10.4, [RH, Score=70.1, Expect=2e-13]} {Smed: dd_Smed_v6_8466_0_1, dd_Smed_v6_8466_0_1, [RH, Score=93.6, Expect=1e-21]} {RNA1509_38788} {RNA1310_25907} {RNA815_7571}
4. MligTC455_47002 25 0.53 Mlig455_054968

Neo: -

Age: logFC(26M/2M)=0.489

Region-enriched R4: 7.313/0.01920

RPL4 0.951 - - - 0.951 - - Mlig455_054968 {REF} {Length: 1332} {TRANSSPLICED} {Pfam: Ribosomal protein L4/L1 family [PF00573.24, score=141.4]; 60S ribosomal protein L4 C-terminal domain [PF14374.8, score=78.8]} {Human: ENSG00000174444, RPL4, ribosomal protein L4, [RH, Score=437, Expect=2e-152]} {Mouse: ENSMUSG00000032399, Rpl4, ribosomal protein L4, [RH, Score=437, Expect=7e-153]} {Dmel: FBgn0003279, RpL4, Ribosomal protein L4, [RH, Score=422, Expect=2e-147]} {Celegans: WBGene00004415, rpl-4, 60S ribosomal protein L4, [RH, Score=395, Expect=2e-137]} {Smed: dd_Smed_v6_211_0_1, dd_Smed_v6_211_0_1, [RH, Score=391, Expect=6e-136]} {RNA1509_548, RNA1509_58918} {RNA1310_26790, RNA1509_58918} {RNA1509_58918, RNA815_10660}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA