Data search
Results for MligTC455_11197
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_11197 | 40 | 0.84 | Mlig455_060780 | Neo: - Age: - |
Mlig455_060780 {REF} {Length: 481} {NoTransDecoderORF} {RNA1310_77165} {RNA815_40081} |
Cumulative graph for MligTC455_11197
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.49 | 1.347 | 0.67001 | 1.00000 | |
| RegionR2 | -0.035 | 1.347 | 0.88722 | 1.00000 | |
| RegionR3 | 0.466 | 1.347 | 0.66784 | 1.00000 | |
| RegionR4 | 1.386 | 1.347 | 0.32271 | 0.64002 | |
| RegionR5 | 0.463 | 1.347 | 0.65914 | 1.00000 | |
| RegionR6 | -0.534 | 1.347 | 0.96569 | 1.00000 | |
| RegionR7 | -0.079 | 1.347 | 0.90037 | 1.00000 | |
| RegionR8 | 0.822 | 1.347 | 0.62990 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.873 | 1.347 | 0.99994 | 1.00000 | |
| RegenerationR2 | -1.018 | 1.347 | 0.24360 | 0.69157 | |
| RegenerationR3 | -0.738 | 1.347 | 0.43148 | 0.82188 | |
| RegenerationR4 | -1.416 | 1.347 | 0.19458 | 0.63965 | |
| RegenerationR5 | 0.21 | 1.347 | 0.81434 | 0.99284 | |
| RegenerationR6 | -1.099 | 1.347 | 0.39512 | 0.73406 | |
| RegenerationBL | -3.862 | 1.347 | 0.14631 | 0.45676 | |
| RegenerationTP | -0.585 | 1.347 | 0.69666 | 1.00000 |
Genes with expression patterns similar to MligTC455_11197
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_11197 | 40 | 0.84 | Mlig455_060780 | Neo: - Age: - |
5 | 1.000 | 1.000 | 1.000 | - | 1.000 | 1.000 | Mlig455_060780 {REF} {Length: 481} {NoTransDecoderORF} {RNA1310_77165} {RNA815_40081} | |
| 2. | MligTC455_17095 | 47 | 0.99 | Mlig455_035386 | Neo: - |
1.683 | - | - | 0.952 | - | - | 0.731 | Mlig455_035386 {REF} {Length: 2131} {NoTransDecoderORF} {RNA1509_25834} {RNA1310_12389} {RNA815_4410.1} | |
| 3. | MligTC455_41874 | 41 | 0.85 | Mlig455_052428 | Neo: Int S/G2/M Age: Up-Down-Up |
CBFB | 0.977 | - | - | 0.977 | - | - | - | Mlig455_052428 {REF} {Length: 2121} {Pfam: Core binding factor beta subunit [PF02312.19, score=118.4]} {Human: ENSG00000067955, CBFB, core-binding factor subunit beta, [Score=53.1, Expect=1e-07]} {Mouse: ENSMUSG00000024246, Thumpd2, THUMP domain containing 2, [RH, Score=96.7, Expect=3e-21]} {Dmel: FBgn0013755, Bro, Brother, [Score=60.1, Expect=4e-10]} {Celegans: WBGene00008559, F07H5.8, [Score=50.4, Expect=2e-06]} {Smed: dd_Smed_v6_2875_0_2, dd_Smed_v6_2875_0_2, [Score=57.8, Expect=1e-10]} {RNA1310_39433} {RNA815_32396} |
| 4. | MligTC455_42208 | 38 | 0.79 | Mlig455_066307 | Neo: - Age: - Region-enriched R4: 6.234/0.04726 |
0.974 | - | - | 0.974 | - | - | - | Mlig455_066307 {REF} {Length: 803} | |
| 5. | MligTC455_48422 | 45 | 0.94 | Mlig455_007852 | Neo: - Age: Up-Down-Down |
ANK2 | 0.972 | - | - | - | - | 0.972 | - | Mlig455_007852 {REF} {Length: 5848} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=145.6]; Ankyrin repeats (many copies) [PF13637.8, score=112.3]; Ankyrin repeat [PF13606.8, score=109.3]; Ankyrin repeats (many copies) [PF13857.8, score=108.8]; Ankyrin repeat [PF00023.32, score=105.7]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=147, Expect=2e-38]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=144, Expect=2e-37]; ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=138, Expect=2e-35]} {Dmel: FBgn0031473, CG3104, [Score=146, Expect=1e-40]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=134, Expect=4e-34]} {Smed: dd_Smed_v6_2072_0_28, dd_Smed_v6_2072_0_28, [Score=132, Expect=1e-33]} {RNA1509_23549} {RNA1310_1208} {RNA815_7779} |
| 6. | MligTC455_30712 | 53 | 1.1 | Mlig455_055428 | Neo: - Age: Up-Down-Up |
0.968 | - | - | 0.968 | - | - | - | Mlig455_055428 {REF} {Length: 3663} {TRANSSPLICED} {RNA1509_31175} {RNA1310_7952} {RNA815_1590.1} | |
| 7. | MligTC455_22272 | 6 | 0.13 | Mlig455_050013 | Neo: - Age: - |
0.965 | - | - | - | - | 0.965 | - | Mlig455_050013 {REF} {Length: 1355} {NoTransDecoderORF} {RNA1509_12830} {RNA1310_79708} {RNA815_9685.1} | |
| 8. | MligTC455_20174 | 71 | 1.47 | Mlig455_007389 | Neo: - Age: - |
HMCN2 | 0.963 | - | - | 0.963 | - | - | - | Mlig455_007389 {REF} {Length: 4803} {Pfam: Immunoglobulin domain [PF13927.8, score=197.2]; Immunoglobulin domain [PF13895.8, score=147.3]; Immunoglobulin I-set domain [PF07679.18, score=127.0]; Immunoglobulin domain [PF00047.27, score=110.8]; Immunoglobulin V-set domain [PF07686.19, score=83.9]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=44.3]; Fibronectin type III domain [PF00041.23, score=32.5]; Izumo-like Immunoglobulin domain [PF16706.7, score=29.7]; T-cell surface glycoprotein CD3 delta chain [PF16680.7, score=27.4]; C17orf99 Ig domain [PF17736.3, score=21.7]} {Human: ENSG00000148357, HMCN2, hemicentin 2, [Score=137, Expect=8e-32]; ENSG00000161270, NPHS1, NPHS1, nephrin, [Score=132, Expect=2e-30]} {Mouse: ENSMUSG00000055632, Hmcn2, hemicentin 2, [Score=135, Expect=2e-31]} {Dmel: FBgn0000547, ed, echinoid, [Score=207, Expect=6e-54]} {Celegans: WBGene00001863, him-4, Hemicentin; High Incidence of Males (Increased X chromosome loss), [Score=108, Expect=3e-23]} {Smed: dd_Smed_v6_13275_0_1, dd_Smed_v6_13275_0_1, [Score=218, Expect=6e-58]} {RNA1310_41694} {RNA815_44118} |
| 9. | MligTC455_34045 | 50 | 1.03 | Mlig455_000064 | Neo: - Age: Up-Down-Down |
EIF4G3 | 0.961 | - | - | - | - | 0.961 | - | Mlig455_000064 {REF} {Length: 2033} {Human: ENSG00000075151, EIF4G3, eukaryotic translation initiation factor 4 gamma 3, [Score=50.8, Expect=3e-07]} {Mouse: ENSMUSG00000028760, Eif4g3, eukaryotic translation initiation factor 4 gamma, 3, [Score=52.0, Expect=1e-07]} {RNA1509_47493} {RNA1310_2285} {RNA815_8691.1} |
| 10. | MligTC455_20847 | 282 | 5.88 | Mlig455_005248 | Neo: - Age: logFC(26M/2M)=0.424 |
TRABD | 0.958 | - | - | - | - | 0.958 | - | Mlig455_005248 {REF} {Length: 2784} {Pfam: TraB/PrgY/gumN family [PF01963.19, score=77.4]} {Human: ENSG00000170638, TRABD, TraB domain containing, [RH, Score=188, Expect=3e-52]} {Mouse: ENSMUSG00000015363, Trabd, TraB domain containing, [RH, Score=186, Expect=3e-52]} {Dmel: FBgn0283438, CG46280, [RH, Score=177, Expect=2e-47]} {Celegans: WBGene00018161, F38A5.2, [Score=176, Expect=1e-47]} {Smed: dd_Smed_v6_6212_0_1, dd_Smed_v6_6212_0_1, [RH, Score=224, Expect=2e-66]} {RNA1509_59644} {RNA1310_15473} {RNA815_11173} |
| 11. | MligTC455_21979 | 40 | 0.83 | Mlig455_009131 | Neo: - Age: - |
MYO7A | 0.955 | - | - | 0.955 | - | - | - | Mlig455_009131 {REF} {Length: 3414} {Pfam: Myosin head (motor domain) [PF00063.23, score=170.0]; AAA ATPase domain [PF13191.8, score=27.3]} {Human: ENSG00000137474, MYO7A, myosin VIIA, [Score=142, Expect=6e-34]} {Mouse: ENSMUSG00000030761, Myo7a, myosin VIIA, [Score=142, Expect=6e-34]} {Dmel: FBgn0262029, d, dachs, [RH, Score=313, Expect=4e-91]} {Celegans: WBGene00002035, hum-1, Heavy chain, Unconventional Myosin, [Score=108, Expect=6e-24]} {Smed: dd_Smed_v6_1626_0_1, dd_Smed_v6_1626_0_1, [Score=107, Expect=2e-23]} {RNA1310_35056} {RNA815_23681} |
| 12. | MligTC455_51894 | 30 | 0.62 | Mlig455_038860 | Neo: - Age: - |
0.954 | - | - | - | - | - | 0.954 | Mlig455_038860 {REF} {Length: 2284} {RNA1310_63177} {RNA815_30782} | |
| 13. | MligTC455_35561 | 23 | 0.47 | Mlig455_058398 | Neo: - Age: - |
0.952 | - | - | 0.952 | - | - | - | Mlig455_058398 {REF} {Length: 576} {NoTransDecoderORF} | |
| 14. | MligTC455_06515 | 4 | 0.09 | Mlig455_037562 | Neo: - Age: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_037562 {REF} {Length: 142} {NoTransDecoderORF} {RNA1509_35578} {RNA1310_66779} {RNA815_21289} |
Berezikov Lab - 2020-2021 © ERIBA