Data search
Results for MligTC455_11221
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_11221 | 273 | 5.68 | Mlig455_055355, Mlig455_055412 | Neo: - Age: - |
CCDC22, RECQL | Mlig455_055355 {REF} {Length: 6048} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF812) [PF05667.13, score=293.9]} {Human: ENSG00000101997, CCDC22, coiled-coil domain containing 22, [RH, Score=119, Expect=1e-27]} {Mouse: ENSMUSG00000031143, Ccdc22, coiled-coil domain containing 22, [RH, Score=121, Expect=2e-28]} {Dmel: FBgn0036671, CG9951, [RH, Score=147, Expect=2e-37]} {Smed: dd_Smed_v6_5400_0_1, dd_Smed_v6_5400_0_1, [RH, Score=140, Expect=3e-35]} {RNA1509_30435} {RNA1310_11945, RNA1509_30435} {RNA1509_30435, RNA815_26037} Mlig455_055412 {REF} {Length: 2549} {TRANSSPLICED} {Pfam: Helicase conserved C-terminal domain [PF00271.33, score=48.6]; RecQ zinc-binding [PF16124.7, score=34.5]} {Human: ENSG00000004700, RECQL, RecQ like helicase, [Score=227, Expect=5e-69]} {Mouse: ENSMUSG00000030243, Recql, RecQ protein-like, [Score=233, Expect=1e-71]} {Dmel: FBgn0002906, Blm, Bloom syndrome helicase, [Score=146, Expect=5e-39]} {Celegans: WBGene00019334, K02F3.12, Putative ATP-dependent DNA helicase Q1, [Score=246, Expect=5e-77]} {Smed: dd_Smed_v6_7318_0_1, dd_Smed_v6_7318_0_1, [Score=183, Expect=4e-53]} {RNA1509_30435} {RNA1310_11945} {RNA815_32980} |
Cumulative graph for MligTC455_11221
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.513 | 3.168 | 0.28812 | 0.94035 | |
| RegionR2 | 1.237 | 3.168 | 0.05449 | 0.27957 | |
| RegionR3 | -0.311 | 3.168 | 0.51465 | 1.00000 | |
| RegionR4 | -0.94 | 3.168 | 0.14451 | 0.39008 | |
| RegionR5 | 0.951 | 3.168 | 0.01297 | 0.06992 | |
| RegionR6 | 0.381 | 3.168 | 0.42613 | 0.99167 | |
| RegionR7 | 1.075 | 3.168 | 0.06938 | 0.50565 | |
| RegionR8 | -0.88 | 3.168 | 0.39253 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -2.353 | 3.168 | 0.70149 | 1.00000 | |
| RegenerationR2 | -0.791 | 3.168 | 0.23897 | 0.68654 | |
| RegenerationR3 | 1.527 | 3.168 | 0.00945 | 0.17765 | |
| RegenerationR4 | 0.434 | 3.168 | 0.48364 | 0.86045 | |
| RegenerationR5 | 0.21 | 3.168 | 0.61065 | 0.91466 | |
| RegenerationR6 | 0.888 | 3.168 | 0.14368 | 0.46436 | |
| RegenerationBL | -0.783 | 3.168 | 0.55691 | 0.91249 | |
| RegenerationTP | -0.054 | 3.168 | 0.95786 | 1.00000 |
Genes with expression patterns similar to MligTC455_11221
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_11221 | 273 | 5.68 | Mlig455_055355, Mlig455_055412 | Neo: - Age: - |
CCDC22, RECQL | 5 | 1.000 | 1.000 | - | 1.000 | 1.000 | 1.000 | Mlig455_055355 {REF} {Length: 6048} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF812) [PF05667.13, score=293.9]} {Human: ENSG00000101997, CCDC22, coiled-coil domain containing 22, [RH, Score=119, Expect=1e-27]} {Mouse: ENSMUSG00000031143, Ccdc22, coiled-coil domain containing 22, [RH, Score=121, Expect=2e-28]} {Dmel: FBgn0036671, CG9951, [RH, Score=147, Expect=2e-37]} {Smed: dd_Smed_v6_5400_0_1, dd_Smed_v6_5400_0_1, [RH, Score=140, Expect=3e-35]} {RNA1509_30435} {RNA1310_11945, RNA1509_30435} {RNA1509_30435, RNA815_26037} Mlig455_055412 {REF} {Length: 2549} {TRANSSPLICED} {Pfam: Helicase conserved C-terminal domain [PF00271.33, score=48.6]; RecQ zinc-binding [PF16124.7, score=34.5]} {Human: ENSG00000004700, RECQL, RecQ like helicase, [Score=227, Expect=5e-69]} {Mouse: ENSMUSG00000030243, Recql, RecQ protein-like, [Score=233, Expect=1e-71]} {Dmel: FBgn0002906, Blm, Bloom syndrome helicase, [Score=146, Expect=5e-39]} {Celegans: WBGene00019334, K02F3.12, Putative ATP-dependent DNA helicase Q1, [Score=246, Expect=5e-77]} {Smed: dd_Smed_v6_7318_0_1, dd_Smed_v6_7318_0_1, [Score=183, Expect=4e-53]} {RNA1509_30435} {RNA1310_11945} {RNA815_32980} |
| 2. | MligTC455_41091 | 430 | 8.97 | Mlig455_034010 | Neo: Irradiation |
MFSD2A | 2.552 | 0.763 | - | - | - | 0.831 | 0.958 | Mlig455_034010 {REF} {Length: 4857} {TRANSSPLICED} {Pfam: MFS/sugar transport protein [PF13347.8, score=279.8]; Major Facilitator Superfamily [PF07690.18, score=41.3]; Sugar (and other) transporter [PF00083.26, score=19.9]} {Human: ENSG00000168389, MFSD2A, major facilitator superfamily domain containing 2A, [Score=248, Expect=6e-74]} {Mouse: ENSMUSG00000028655, Mfsd2a, major facilitator superfamily domain containing 2A, [Score=245, Expect=8e-73]} {Smed: dd_Smed_v6_11210_0_1, dd_Smed_v6_11210_0_1, [Score=283, Expect=4e-87]} {RNA1509_14841} {RNA1310_5304} {RNA815_20517} |
| 3. | MligTC455_54081 | 467 | 9.74 | Mlig455_029686 | Neo: Irradiation Age: Down-Up-Down Region-specific R5: 2.785 Region-enriched R5: 2.356/0.00000 |
GFI1 | 1.795 | 0.837 | - | - | - | - | 0.958 | Mlig455_029686 {REF} {Length: 2343} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=33.7]; C2H2-type zinc finger [PF13894.8, score=30.7]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=21.6]} {Human: ENSG00000162676, GFI1, growth factor independent 1 transcriptional repressor, [Score=80.1, Expect=2e-15]; ENSG00000165702, GFI1B, growth factor independent 1B transcriptional repressor, [Score=78.6, Expect=1e-15]} {Mouse: ENSMUSG00000029275, Gfi1, growth factor independent 1 transcription repressor, [Score=81.6, Expect=5e-16]; ENSMUSG00000026815, Gfi1b, growth factor independent 1B, [Score=78.6, Expect=3e-15]} {Dmel: FBgn0051632, sens-2, senseless-2, [Score=86.7, Expect=1e-17]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [Score=81.3, Expect=2e-16]} {Smed: dd_Smed_v6_2946_0_1, dd_Smed_v6_2946_0_1, [RH, Score=183, Expect=1e-51]} {RNA1509_56333} {RNA1310_7337} {RNA815_12480} |
| 4. | MligTC455_54082 | 468 | 9.75 | Mlig455_064909 | Neo: Irradiation Age: - Region-enriched R5: 2.334/0.00000 |
GFI1 | 1.793 | 0.834 | - | - | - | - | 0.959 | Mlig455_064909 {REF} {Length: 2558} {Pfam: C2H2-type zinc finger [PF13894.8, score=27.8]; Zinc finger, C2H2 type [PF00096.28, score=26.2]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=21.7]} {Human: ENSG00000162676, GFI1, growth factor independent 1 transcriptional repressor, [Score=79.3, Expect=4e-15]; ENSG00000165702, GFI1B, growth factor independent 1B transcriptional repressor, [Score=77.8, Expect=3e-15]} {Mouse: ENSMUSG00000029275, Gfi1, growth factor independent 1 transcription repressor, [Score=80.9, Expect=1e-15]; ENSMUSG00000026815, Gfi1b, growth factor independent 1B, [Score=77.8, Expect=6e-15]} {Dmel: FBgn0051632, sens-2, senseless-2, [Score=85.5, Expect=5e-17]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [Score=80.1, Expect=4e-16]} {Smed: dd_Smed_v6_2946_0_1, dd_Smed_v6_2946_0_1, [RH, Score=182, Expect=7e-51]} {RNA1509_4057} {RNA1310_7337} {RNA815_12480} |
| 5. | MligTC455_15941 | 1123 | 23.4 | Mlig455_049917 | Neo: Neoblast, stringent Age: Down-Up-Up Region-enriched R5: 2.129/0.00000 |
1.763 | 0.780 | - | - | - | - | 0.983 | Mlig455_049917 {REF} {Length: 702} {TRANSSPLICED} {Pfam: Replication factor A protein 3 [PF08661.13, score=81.0]} {RNA1509_16541, RNA1509_18258} {RNA1310_40327, RNA1509_16541, RNA1509_18258} {RNA1509_16541, RNA1509_18258, RNA815_26601} | |
| 6. | MligTC455_20667 | 992 | 20.67 | Mlig455_031254, Mlig455_031299, Mlig455_031329 | Neo: Neoblast, stringent Age: logFC(26M/2M)=0.264 Region-enriched R5: 1.345/0.00244 |
XPC | 1.744 | - | - | - | 0.791 | - | 0.953 | Mlig455_031254 {REF} {Length: 234} {NoTransDecoderORF} {RNA1509_41875} {RNA1310_5347} Mlig455_031299 {REF} {Length: 5228} {Pfam: Rad4 beta-hairpin domain 3 [PF10405.11, score=85.1]; Rad4 beta-hairpin domain 2 [PF10404.11, score=58.3]; Rad4 beta-hairpin domain 1 [PF10403.11, score=54.1]; Rad4 transglutaminase-like domain [PF03835.17, score=50.1]} {Human: ENSG00000154767, XPC, XPC complex subunit, DNA damage recognition and repair factor, [RH, Score=292, Expect=5e-84]} {Mouse: ENSMUSG00000030094, Xpc, xeroderma pigmentosum, complementation group C, [RH, Score=302, Expect=6e-88]} {Dmel: FBgn0004698, Xpc, Xeroderma pigmentosum, complementation group C, [RH, Score=296, Expect=3e-84]} {Celegans: WBGene00022296, xpc-1, XPC (Xeroderma Pigmentosum group C) DNA repair gene homolog, [RH, Score=231, Expect=1e-62]} {Smed: dd_Smed_v6_5100_0_1, dd_Smed_v6_5100_0_1, [RH, Score=236, Expect=3e-67]} {RNA1509_22240, RNA1509_37174, RNA1509_43141} {RNA1310_2636, RNA1509_22240, RNA1509_37174, RNA1509_43141} {RNA1509_22240, RNA1509_37174, RNA1509_43141, RNA815_7190.1} Mlig455_031329 {REF} {Length: 3756} {TRANSSPLICED} {Pfam: Rad4 beta-hairpin domain 3 [PF10405.11, score=84.0]; Rad4 beta-hairpin domain 2 [PF10404.11, score=58.3]; Rad4 beta-hairpin domain 1 [PF10403.11, score=52.6]; Rad4 transglutaminase-like domain [PF03835.17, score=50.2]} {Human: ENSG00000154767, XPC, XPC complex subunit, DNA damage recognition and repair factor, [RH, Score=283, Expect=5e-81]} {Mouse: ENSMUSG00000030094, Xpc, xeroderma pigmentosum, complementation group C, [RH, Score=301, Expect=9e-88]} {Dmel: FBgn0004698, Xpc, Xeroderma pigmentosum, complementation group C, [RH, Score=296, Expect=2e-84]} {Celegans: WBGene00022296, xpc-1, XPC (Xeroderma Pigmentosum group C) DNA repair gene homolog, [RH, Score=229, Expect=3e-62]} {Smed: dd_Smed_v6_5100_0_1, dd_Smed_v6_5100_0_1, [RH, Score=237, Expect=2e-67]} {RNA1509_38140} {RNA1310_4273.2} {RNA815_7190.1} |
| 7. | MligTC455_36607 | 751 | 15.64 | Mlig455_016782 | Neo: Irradiation |
1.743 | 0.789 | - | - | - | - | 0.954 | Mlig455_016782 {REF} {Length: 5127} {TRANSSPLICED} {Pfam: Septation ring formation regulator, EzrA [PF06160.14, score=17.7]} {RNA1509_5600} {RNA1310_2454.1} {RNA815_1456} | |
| 8. | MligTC455_36608 | 754 | 15.7 | Mlig455_016801 | Neo: Irradiation Age: - |
1.74 | 0.789 | - | - | - | - | 0.951 | Mlig455_016801 {REF} {Length: 5200} {TRANSSPLICED} {Pfam: Septation ring formation regulator, EzrA [PF06160.14, score=17.7]} {RNA1509_5600} {RNA1310_2454.1} {RNA815_1456} | |
| 9. | MligTC455_20515 | 1058 | 22.04 | Mlig455_008959 | Neo: Irradiation Age: - Region-enriched R5: 1.041/0.01884 |
RPA1 | 1.681 | - | - | - | 0.728 | - | 0.953 | Mlig455_008959 {REF} {Length: 2367} {TRANSSPLICED} {Pfam: Replication factor-A C terminal domain [PF08646.12, score=154.5]; Replication protein A OB domain [PF16900.7, score=113.5]; Replication factor-A protein 1, N-terminal domain [PF04057.14, score=63.1]; OB-fold nucleic acid binding domain [PF01336.27, score=53.2]; Cell division control protein 24, OB domain 3 [PF17244.4, score=28.5]} {Human: ENSG00000132383, RPA1, replication protein A1, [RH, Score=496, Expect=1e-168]} {Mouse: ENSMUSG00000000751, Rpa1, replication protein A1, [RH, Score=496, Expect=2e-168]} {Dmel: FBgn0010173, RpA-70, Replication Protein A 70, [RH, Score=434, Expect=9e-145]} {Celegans: WBGene00017546, rpa-1, Probable replication factor A 73 kDa subunit, [RH, Score=217, Expect=1e-61]} {Smed: dd_Smed_v6_3342_0_1, dd_Smed_v6_3342_0_1, [RH, Score=416, Expect=1e-138]} {RNA1509_35290, RNA1509_4117, RNA1509_54395} {RNA1310_7820.1, RNA1509_35290, RNA1509_4117, RNA1509_54395} {RNA1509_35290, RNA1509_4117, RNA1509_54395, RNA815_2777} |
| 10. | MligTC455_10635 | 35 | 0.74 | Mlig455_004317 | Neo: - Age: Up-Down-Down |
FLOT1 | 0.97 | - | - | - | 0.970 | - | - | Mlig455_004317 {REF} {Length: 1135} {Pfam: SPFH domain / Band 7 family [PF01145.27, score=55.4]} {Human: ENSG00000236271, FLOT1, flotillin 1, [Score=166, Expect=2e-52]; ENSG00000232280, FLOT1, flotillin 1, [Score=166, Expect=2e-52]; ENSG00000206379, FLOT1, flotillin 1, [Score=166, Expect=2e-52]; ENSG00000137312, FLOT1, flotillin 1, [Score=166, Expect=2e-52]; ENSG00000206480, FLOT1, flotillin 1, [Score=166, Expect=2e-52]; ENSG00000230143, FLOT1, flotillin 1, [Score=166, Expect=2e-52]} {Mouse: ENSMUSG00000059714, Flot1, flotillin 1, [Score=166, Expect=2e-52]} {Dmel: FBgn0024754, Flo1, Flotillin 1, [Score=178, Expect=1e-54]} {Smed: dd_Smed_v6_4656_0_2, dd_Smed_v6_4656_0_2, [Score=191, Expect=6e-60]} {RNA1310_37866} {RNA815_26762} |
| 11. | MligTC455_17589 | 718 | 14.96 | Mlig455_059211 | Neo: Irradiation Age: - Region-specific R5: 2.104 Region-enriched R5: 1.511/0.00000 |
0.958 | - | - | - | - | - | 0.958 | Mlig455_059211 {REF} {Length: 2808} {TRANSSPLICED} {RNA1509_6616} {RNA1310_6367, RNA1509_6616} {RNA1509_6616, RNA815_10020} | |
| 12. | MligTC455_27403 | 313 | 6.53 | Mlig455_054509 | Neo: Irradiation Age: - Region-enriched R5: 1.865/0.00001 |
0.958 | - | - | - | - | - | 0.958 | Mlig455_054509 {REF} {Length: 5806} {TRANSSPLICED} {Mouse: ENSMUSG00000027422, Rrbp1, ribosome binding protein 1, [Score=53.9, Expect=2e-06]} {RNA1509_31175} {RNA1310_11529} {RNA815_1590.1} | |
| 13. | MligTC455_45514 | 535 | 11.15 | Mlig455_039382, Mlig455_039389 | Neo: - Age: - Region-enriched R5: 2.510/0.00057 |
EPHX4 | 0.956 | - | - | - | - | - | 0.956 | Mlig455_039382 {REF} {Length: 1895} {Pfam: alpha/beta hydrolase fold [PF00561.22, score=81.6]; Alpha/beta hydrolase family [PF12697.9, score=80.2]; Serine aminopeptidase, S33 [PF12146.10, score=41.0]} {Human: ENSG00000172031, EPHX4, epoxide hydrolase 4, [Score=228, Expect=2e-71]} {Mouse: ENSMUSG00000033805, Ephx4, epoxide hydrolase 4, [RH, Score=238, Expect=1e-75]} {Dmel: FBgn0035951, CG5068, [Score=47.8, Expect=9e-06]} {Celegans: WBGene00010628, ceeh-2, Epoxide hydrolase 2, [RH, Score=216, Expect=1e-67]} {Smed: dd_Smed_v6_2011_0_1, dd_Smed_v6_2011_0_1, [RH, Score=247, Expect=2e-79]} {RNA1509_44576} {RNA1310_24565} {RNA815_17934} Mlig455_039389 {REF} {Length: 2224} {Pfam: alpha/beta hydrolase fold [PF00561.22, score=81.6]; Alpha/beta hydrolase family [PF12697.9, score=80.6]; Serine aminopeptidase, S33 [PF12146.10, score=41.0]} {Human: ENSG00000172031, EPHX4, epoxide hydrolase 4, [Score=227, Expect=3e-71]} {Mouse: ENSMUSG00000033805, Ephx4, epoxide hydrolase 4, [RH, Score=238, Expect=2e-75]} {Dmel: FBgn0035951, CG5068, [Score=47.8, Expect=9e-06]} {Celegans: WBGene00010628, ceeh-2, Epoxide hydrolase 2, [RH, Score=216, Expect=3e-67]} {Smed: dd_Smed_v6_2011_0_1, dd_Smed_v6_2011_0_1, [RH, Score=246, Expect=3e-79]} {RNA1509_44576} {RNA1310_24565} {RNA815_17934} |
| 14. | MligTC455_47753 | 540 | 11.25 | Mlig455_025424 | Neo: Irradiation Age: Down-Up-Up Region-enriched R5: 1.577/0.00074 |
0.954 | - | - | - | - | - | 0.954 | Mlig455_025424 {REF} {Length: 1697} {TRANSSPLICED} {RNA1509_20139, RNA1509_33887} {RNA1310_18333, RNA1509_20139, RNA1509_33887} {RNA1509_20139, RNA1509_33887, RNA815_2604} | |
| 15. | MligTC455_03281 | 557 | 11.61 | Mlig455_031117 | Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R5: 2.391/0.00055 |
NAF1 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_031117 {REF} {Length: 1997} {TRANSSPLICED} {Pfam: Gar1/Naf1 RNA binding region [PF04410.16, score=58.4]} {Human: ENSG00000145414, NAF1, nuclear assembly factor 1 ribonucleoprotein, [RH, Score=114, Expect=2e-26]} {Mouse: ENSMUSG00000014907, Naf1, nuclear assembly factor 1 ribonucleoprotein, [RH, Score=117, Expect=2e-27]} {Dmel: FBgn0032701, CG10341, [RH, Score=80.9, Expect=9e-16]} {RNA1509_15924} {RNA1310_15351} {RNA815_24898} |