Data search


search
Exact
Search

Results for MligTC455_11280

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_11280 29 0.61 Mlig455_039332

Neo: -

Age: -

ANK1 Mlig455_039332 {REF} {Length: 3527} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=173.2]; Ankyrin repeats (many copies) [PF13637.8, score=162.3]; Ankyrin repeats (many copies) [PF13857.8, score=139.5]; Ankyrin repeat [PF00023.32, score=134.4]; Ankyrin repeat [PF13606.8, score=116.3]; Mab-21 protein [PF03281.16, score=27.6]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=172, Expect=6e-43]; ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=168, Expect=6e-42]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=172, Expect=2e-43]; ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=165, Expect=4e-41]} {Dmel: FBgn0011747, Ank, Ankyrin, [Score=191, Expect=2e-49]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=162, Expect=2e-40]} {Smed: dd_Smed_v6_2072_0_10, dd_Smed_v6_2072_0_10, [Score=150, Expect=1e-36]}

Cumulative graph for MligTC455_11280

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.29 0.599 1.00000 1.00000
RegionR2 0.918 0.599 0.99996 1.00000
RegionR3 -0.072 0.599 0.99996 1.00000
RegionR4 -1.418 0.599 0.99988 1.00000
RegionR5 -0.767 0.599 0.99994 1.00000
RegionR6 -0.512 0.599 0.99993 1.00000
RegionR7 0.634 0.599 0.99999 1.00000
RegionR8 1.506 0.599 0.99997 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.662 0.599 0.99996 1.00000
RegenerationR2 1.227 0.599 1.00000 1.00000
RegenerationR3 1.988 0.599 1.00000 1.00000
RegenerationR4 -0.197 0.599 0.99997 1.00000
RegenerationR5 1.585 0.599 0.99983 1.00000
RegenerationR6 -0.43 0.599 0.99997 1.00000
RegenerationBL -1.693 0.599 0.99994 1.00000
RegenerationTP -1.03 0.599 0.99996 1.00000


Genes with expression patterns similar to MligTC455_11280

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_11280 29 0.61 Mlig455_039332

Neo: -

Age: -

ANK1 1 - - - - 1.000 - Mlig455_039332 {REF} {Length: 3527} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=173.2]; Ankyrin repeats (many copies) [PF13637.8, score=162.3]; Ankyrin repeats (many copies) [PF13857.8, score=139.5]; Ankyrin repeat [PF00023.32, score=134.4]; Ankyrin repeat [PF13606.8, score=116.3]; Mab-21 protein [PF03281.16, score=27.6]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=172, Expect=6e-43]; ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=168, Expect=6e-42]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=172, Expect=2e-43]; ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=165, Expect=4e-41]} {Dmel: FBgn0011747, Ank, Ankyrin, [Score=191, Expect=2e-49]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=162, Expect=2e-40]} {Smed: dd_Smed_v6_2072_0_10, dd_Smed_v6_2072_0_10, [Score=150, Expect=1e-36]}
2. MligTC455_18880 57 1.19 Mlig455_034555, Mlig455_041488

Neo: -

Age: -

0.982 - - - - 0.982 -

Mlig455_034555 {REF} {Length: 588} {Smed: dd_Smed_v6_512_0_1, dd_Smed_v6_512_0_1, [Score=41.2, Expect=3e-06]} {RNA1509_11091} {RNA1310_4937.1} {RNA815_15376}

Mlig455_041488 {REF} {Length: 714} {Pfam: Stathmin family [PF00836.21, score=25.1]} {Smed: dd_Smed_v6_512_0_2, dd_Smed_v6_512_0_2, [Score=60.1, Expect=4e-13]} {RNA1509_11091} {RNA1310_4937.1} {RNA815_15376}
3. MligTC455_54274 117 2.44 Mlig455_027010

Neo: -

Age: -

0.982 - - - - 0.982 - Mlig455_027010 {REF} {Length: 1490} {Pfam: Cornifin (SPRR) family [PF02389.17, score=31.2]} {Mouse: ENSMUSG00000048455, Sprr1b, small proline-rich protein 1B, [Score=42.7, Expect=1e-05]} {RNA1509_43344, RNA1509_49957} {RNA1310_7447.1, RNA1509_49957} {RNA1509_49957, RNA815_1983}
4. MligTC455_05640 9 0.19 Mlig455_023571

Neo: -

Age: -

0.98 - - - - 0.980 - Mlig455_023571 {REF} {Length: 993} {NoTransDecoderORF}
5. MligTC455_36336 12 0.25 Mlig455_018830

Neo: -

Age: -

0.964 - - - - 0.964 - Mlig455_018830 {REF} {Length: 1212} {NoTransDecoderORF} {RNA1509_31395} {RNA1310_37524.1} {RNA815_26316}
6. MligTC455_27968 139 2.9 Mlig455_006102

Neo: -

Age: -

SYNCRIP 0.953 - - - - 0.953 - Mlig455_006102 {REF} {Length: 3069} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=86.6]; Double-stranded RNA binding motif [PF00035.28, score=67.2]; Occluded RNA-recognition motif [PF16842.7, score=20.3]} {Human: ENSG00000135316, SYNCRIP, synaptotagmin binding cytoplasmic RNA interacting protein, [Score=189, Expect=7e-52]} {Mouse: ENSMUSG00000032423, Syncrip, synaptotagmin binding, cytoplasmic RNA interacting protein, [Score=188, Expect=1e-51]} {Dmel: FBgn0038826, Syp, Syncrip, [Score=223, Expect=4e-63]} {Celegans: WBGene00015943, tiar-1, TIA-1/TIAL RNA binding protein homolog, [Score=63.9, Expect=2e-10]} {Smed: dd_Smed_v6_62256_0_1, dd_Smed_v6_62256_0_1, [Score=144, Expect=4e-37]} {RNA1509_30609} {RNA1310_8624} {RNA815_8285}
7. MligTC455_05844 13 0.28 Mlig455_045537

Neo: -

Age: -

0.952 - - - - 0.952 - Mlig455_045537 {REF} {Length: 635} {Celegans: WBGene00019192, H12I13.3, [Score=85.5, Expect=1e-20]} {Smed: dd_Smed_v6_9974_1_7, dd_Smed_v6_9974_1_7, [Score=49.3, Expect=4e-08]} {RNA1509_51941} {RNA1310_3396.1} {RNA815_1342.1}
8. MligTC455_08519 2 0.04 Mlig455_015863

Neo: -

Age: -

0.952 - - - - 0.952 - Mlig455_015863 {REF} {Length: 391} {NoTransDecoderORF} {RNA1509_55882} {RNA1310_45816.1} {RNA815_34089}
9. MligTC455_41367 7 0.15 Mlig455_011660, Mlig455_049926

Neo: -

Age: -

0.952 - - - - 0.952 -

Mlig455_011660 {REF} {Length: 139} {NoTransDecoderORF} {RNA1509_9095} {RNA1310_45029.2} {RNA815_6607}

Mlig455_049926 {REF} {Length: 139} {NoTransDecoderORF} {RNA1509_9095} {RNA1310_45029.2} {RNA815_6607}
10. MligTC455_43530 8 0.17 Mlig455_060026

Neo: -

Age: -

0.952 - - - - 0.952 - Mlig455_060026 {REF} {Length: 1282} {NoTransDecoderORF} {RNA1310_40016.2}
11. MligTC455_45387 13 0.28 Mlig455_034357

Neo: -

Age: -

0.952 - - - - 0.952 - Mlig455_034357 {REF} {Length: 1028} {NoTransDecoderORF} {RNA1310_140207}
12. MligTC455_07143 7 0.15 Mlig455_051063

Neo: -

Age: -

0.951 - - - - 0.951 - Mlig455_051063 {REF} {Length: 941} {NoTransDecoderORF} {RNA1509_50426} {RNA1310_4534} {RNA815_32846}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA