TomoSeq data search

Data search

Results for MligTC455_11404

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_11404	132	2.75	Mlig455_068341	Neo: - Age: Down-Up-Down		Mlig455_068341 {REF} {Length: 425} {TRANSSPLICED} {RNA1509_37276} {RNA1310_21851} {RNA815_10072.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_11404

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-5.526	2.267	1.00000	1.00000
RegionR2	1.306	2.267	0.27975	0.66648
RegionR3	2.439	2.267	0.00782	0.12933
RegionR4	1.182	2.267	0.28393	0.59281
RegionR5	1.462	2.267	0.14952	0.40209
RegionR6	1.766	2.267	0.09119	0.55528
RegionR7	2.33	2.267	0.03311	0.34688
RegionR8	-4.959	2.267	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.076	2.267	0.99998	1.00000
RegenerationR2	0.023	2.267	0.96810	1.00000
RegenerationR3	-1.588	2.267	0.01443	0.21989
RegenerationR4	-0.591	2.267	0.40479	0.81636
RegenerationR5	-0.606	2.267	0.32969	0.75178
RegenerationR6	0.046	2.267	0.94150	1.00000
RegenerationBL	1.166	2.267	0.42975	0.79782
RegenerationTP	1.908	2.267	0.34926	0.79074

Genes with expression patterns similar to MligTC455_11404

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_11404	132	2.75	Mlig455_068341	Neo: - Age: Down-Up-Down		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_068341 {REF} {Length: 425} {TRANSSPLICED} {RNA1509_37276} {RNA1310_21851} {RNA815_10072.1}
2.	MligTC455_31368	287	5.99	Mlig455_066670	Neo: - Age: -	VPS16	0.962	-	-	-	-	0.962	-	Mlig455_066670 {REF} {Length: 3991} {Pfam: Vps16, C-terminal region [PF04840.14, score=199.1]; Vps16, N-terminal region [PF04841.15, score=55.4]} {Human: ENSG00000215305, VPS16, VPS16, CORVET/HOPS core subunit, [Score=255, Expect=2e-74]} {Mouse: ENSMUSG00000027411, Vps16, VSP16 CORVET/HOPS core subunit, [Score=261, Expect=1e-76]} {Dmel: FBgn0285911, Vps16A, Vacuolar protein sorting 16A, [Score=224, Expect=2e-63]} {Celegans: WBGene00006516, vps-16, Vacuolar protein sorting-associated protein 16 homolog, [Score=117, Expect=4e-27]} {Smed: dd_Smed_v6_4534_0_1, dd_Smed_v6_4534_0_1, [Score=175, Expect=2e-46]} {RNA1509_15541} {RNA1310_5715} {RNA815_5826}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_11404

132

2.75

Mlig455_068341

Neo: -

Age: Down-Up-Down

1.000

Mlig455_068341 {REF} {Length: 425} {TRANSSPLICED} {RNA1509_37276} {RNA1310_21851} {RNA815_10072.1}

MligTC455_31368

287

5.99

Mlig455_066670

Neo: -

Age: -

VPS16

0.962

Mlig455_066670 {REF} {Length: 3991} {Pfam: Vps16, C-terminal region [PF04840.14, score=199.1]; Vps16, N-terminal region [PF04841.15, score=55.4]} {Human: ENSG00000215305, VPS16, VPS16, CORVET/HOPS core subunit, [Score=255, Expect=2e-74]} {Mouse: ENSMUSG00000027411, Vps16, VSP16 CORVET/HOPS core subunit, [Score=261, Expect=1e-76]} {Dmel: FBgn0285911, Vps16A, Vacuolar protein sorting 16A, [Score=224, Expect=2e-63]} {Celegans: WBGene00006516, vps-16, Vacuolar protein sorting-associated protein 16 homolog, [Score=117, Expect=4e-27]} {Smed: dd_Smed_v6_4534_0_1, dd_Smed_v6_4534_0_1, [Score=175, Expect=2e-46]} {RNA1509_15541} {RNA1310_5715} {RNA815_5826}