Data search
Results for MligTC455_11707
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_11707 | 15 | 0.30 | Mlig455_022725 | Neo: - Age: - |
Mlig455_022725 {REF} {Length: 929} {NoTransDecoderORF} {RNA1310_21343.1} {RNA815_23927} |
Cumulative graph for MligTC455_11707
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.413 | 0.86 | 1.00000 | 1.00000 | |
| RegionR2 | 0.665 | 0.86 | 0.43962 | 0.82879 | |
| RegionR3 | 0.524 | 0.86 | 0.29671 | 0.83855 | |
| RegionR4 | -0.227 | 0.86 | 0.64414 | 0.94843 | |
| RegionR5 | 4.268 | 0.86 | 0.02477 | 0.11295 | |
| RegionR6 | 1.687 | 0.86 | 0.17670 | 0.73875 | |
| RegionR7 | -2.09 | 0.86 | 0.99966 | 1.00000 | |
| RegionR8 | -2.415 | 0.86 | 1.00000 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.046 | 0.86 | 0.99996 | 1.00000 | |
| RegenerationR2 | 0.884 | 0.86 | 0.70136 | 0.95679 | |
| RegenerationR3 | 1.098 | 0.86 | 0.75132 | 0.96501 | |
| RegenerationR4 | 2.021 | 0.86 | 0.41788 | 0.82476 | |
| RegenerationR5 | -4.231 | 0.86 | 0.09030 | 0.46197 | |
| RegenerationR6 | -0.442 | 0.86 | 0.89271 | 1.00000 | |
| RegenerationBL | -0.265 | 0.86 | 1.00000 | 1.00000 | |
| RegenerationTP | 0.771 | 0.86 | 0.99997 | 1.00000 |
Genes with expression patterns similar to MligTC455_11707
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_11707 | 15 | 0.3 | Mlig455_022725 | Neo: - Age: - |
3 | 1.000 | 1.000 | - | 1.000 | - | - | Mlig455_022725 {REF} {Length: 929} {NoTransDecoderORF} {RNA1310_21343.1} {RNA815_23927} | |
| 2. | MligTC455_03474 | 141 | 2.93 | Mlig455_056887 | Neo: - Age: - Region-enriched R5: 3.267/0.00391 |
1.798 | 0.973 | 0.825 | - | - | - | - | Mlig455_056887 {REF} {Length: 764} {Pfam: Protealysin propeptide [PF16485.7, score=22.9]; Carbohydrate binding domain (family 19) [PF03427.15, score=22.2]; Zinc finger, ZZ type [PF00569.19, score=19.6]} {RNA1509_39801} {RNA1310_107778} {RNA815_62924} | |
| 3. | MligTC455_35981 | 145 | 3.03 | Mlig455_042432 | Neo: - Age: - Region-enriched R2: 7.277/0.00098 Regeneration-upregulated R4: 6.961 Regeneration-enriched R4: 6.961 |
1.772 | 0.975 | 0.797 | - | - | - | - | Mlig455_042432 {REF} {Length: 5878} {Pfam: RNase H [PF00075.26, score=54.9]; Protein of unknown function (DUF2722) [PF10846.10, score=24.5]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=23.0]; Reverse transcriptase-like [PF13456.8, score=21.5]} {RNA1509_17965} {RNA1310_116.2} {RNA815_986} | |
| 4. | MligTC455_35982 | 1405 | 29.27 | Mlig455_009323, Mlig455_022837, Mlig455_022838, Mlig455_037709, Mlig455_042292, Mlig455_044783, Mlig455_052915, Mlig455_054665, Mlig455_055175, Mlig455_061419, Mlig455_063453, Mlig455_070549 | Neo: Germline Age: logFC(26M/2M)=0.698 Region-enriched R5: 4.319/0.01846 |
1.765 | 0.975 | 0.790 | - | - | - | - | Mlig455_009323 {REF} {Length: 486} {RNA1509_17965} {RNA1310_91224.1} {RNA815_48050.1} Mlig455_022837 {REF} {Length: 1215} {Pfam: Endonuclease-reverse transcriptase [PF14529.8, score=67.0]; Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=45.0]} {RNA1509_30354} {RNA1310_91224.1} {RNA815_48050.1} Mlig455_022838 {REF} {Length: 1533} {Pfam: RNase H [PF00075.26, score=49.9]; Reverse transcriptase-like [PF13456.8, score=22.0]} {RNA1509_53488} {RNA1310_43206} {RNA815_37912} Mlig455_037709 {REF} {Length: 1046} {RNA1509_30354} {RNA1310_37492} {RNA815_48050.1} Mlig455_042292 {REF} {Length: 1640} {Pfam: Subunit CCDC53 of WASH complex [PF10152.11, score=19.3]} {RNA1509_17965} {RNA1310_37492} {RNA815_48050.1} Mlig455_044783 {REF} {Length: 488} {RNA1509_17965} {RNA1310_91224.1} {RNA815_48050.1} Mlig455_052915 {REF} {Length: 373} {RNA1509_30354} {RNA1310_91224.1} {RNA815_48050.1} Mlig455_054665 {REF} {Length: 485} {Pfam: RNase H [PF00075.26, score=54.6]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=30.8]; Protein of unknown function (DUF2722) [PF10846.10, score=26.8]; Photosynthesis affected mutant 68 [PF11947.10, score=21.5]; Reverse transcriptase-like [PF13456.8, score=21.2]} {RNA1509_17965} {RNA1310_91224.1} {RNA815_48050.1} Mlig455_055175 {REF} {Length: 491} {Pfam: RNase H [PF00075.26, score=54.6]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=30.8]; Protein of unknown function (DUF2722) [PF10846.10, score=26.8]; Photosynthesis affected mutant 68 [PF11947.10, score=21.5]; Reverse transcriptase-like [PF13456.8, score=21.2]} {RNA1509_17965, RNA1509_18260} {RNA1310_91224.1, RNA1509_18260} {RNA1509_18260, RNA815_48050.1} Mlig455_061419 {REF} {Length: 441} {Pfam: Subunit CCDC53 of WASH complex [PF10152.11, score=19.3]} {RNA1509_17965} {RNA1310_91224.1} {RNA815_48050.1} Mlig455_063453 {REF} {Length: 458} {Pfam: Subunit CCDC53 of WASH complex [PF10152.11, score=19.3]} {RNA1509_17965} {RNA1310_91224.1} {RNA815_48050.1} Mlig455_070549 {REF} {Length: 511} {RNA1509_17965} {RNA1310_91224.1} {RNA815_48050.1} |
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| 5. | MligTC455_30881 | 1063 | 22.16 | Mlig455_030238, Mlig455_056816, Mlig455_061738, Mlig455_064441 | Neo: - Age: Down-Up-Down Region-enriched R5: 3.062/0.00000 |
ANKRD44 | 1.745 | 0.959 | 0.786 | - | - | - | - | Mlig455_030238 {REF} {Length: 1434} {RNA1509_22244} {RNA1310_14527} {RNA815_7836.1} Mlig455_056816 {REF} {Length: 1414} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_22244} {RNA1310_14527} {RNA815_7836.1} Mlig455_061738 {REF} {Length: 1154} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=39.5]; Ankyrin repeats (many copies) [PF13637.8, score=31.9]; Ankyrin repeat [PF13606.8, score=25.0]; Ankyrin repeat [PF00023.32, score=20.7]} {Human: ENSG00000065413, ANKRD44, ankyrin repeat domain 44, [Score=47.8, Expect=1e-05]} {RNA1509_49250} {RNA1310_19601.1} {RNA815_7202.1} Mlig455_064441 {REF} {Length: 700} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=64.7]; Ankyrin repeats (many copies) [PF13637.8, score=41.3]; Ankyrin repeats (many copies) [PF13857.8, score=37.8]; Ankyrin repeat [PF00023.32, score=34.2]; Ankyrin repeat [PF13606.8, score=30.3]} {RNA1509_49250} {RNA1310_13549.1} {RNA815_7202.1} |
| 6. | MligTC455_11648 | 38 | 0.8 | Mlig455_031073 | Neo: Irradiation Age: - Region-enriched R5: 3.267/0.03926 |
0.97 | 0.970 | - | - | - | - | - | Mlig455_031073 {REF} {Length: 1035} {Mouse: ENSMUSG00000070425, Xntrpc, Xndc1-transient receptor potential cation channel, subfamily C, member 2 readthrough, [Score=76.6, Expect=3e-15]; ENSMUSG00000100254, Trpc2, transient receptor potential cation channel, subfamily C, member 2, [Score=74.3, Expect=2e-14]} {RNA1310_35920} {RNA815_60543} |