TomoSeq data search

Data search

Results for MligTC455_11850

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_11850	53	1.11	Mlig455_041164	Neo: Int S/G2/M Age: Up-Down-Down, logFC(26M/2M)=-0.288 Regeneration-upregulated R3: 5.992 Regeneration-enriched R3: 5.992		Mlig455_041164 {REF} {Length: 1041} {RNA1509_12406} {RNA1310_39718.1} {RNA815_28814.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_11850

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	2.663	1.343	0.26903	0.91977
RegionR2	0.327	1.343	0.78573	1.00000
RegionR3	-1.31	1.343	0.99457	1.00000
RegionR4	0.508	1.343	0.66937	0.96644
RegionR5	-0.747	1.343	0.96929	1.00000
RegionR6	0.816	1.343	0.41520	0.98365
RegionR7	1.037	1.343	0.46140	1.00000
RegionR8	-3.294	1.343	0.41791	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-2.198	1.343	0.76973	1.00000
RegenerationR2	3.623	1.343	0.00196	0.06754
RegenerationR3	5.992	1.343	0.00000	0.00032	Specific for R3: 5.992
RegenerationR4	2.256	1.343	0.04923	0.35779
RegenerationR5	2.91	1.343	0.00432	0.11847
RegenerationR6	0.178	1.343	0.98180	1.00000
RegenerationBL	4.478	1.343	0.01398	0.12316
RegenerationTP	2.127	1.343	0.46430	0.87703

Genes with expression patterns similar to MligTC455_11850

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_11850	53	1.11	Mlig455_041164	Neo: Int S/G2/M Age: Up-Down-Down, logFC(26M/2M)=-0.288 Regeneration-upregulated R3: 5.992 Regeneration-enriched R3: 5.992		4	1.000	1.000	-	-	1.000	1.000	Mlig455_041164 {REF} {Length: 1041} {RNA1509_12406} {RNA1310_39718.1} {RNA815_28814.1}
2.	MligTC455_14069	11	0.23	Mlig455_053172	Neo: - Age: -	MTNR1A	0.952	-	-	-	-	0.952	-	Mlig455_053172 {REF} {Length: 5061} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=152.6]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=38.8]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=29.6]; Serpentine type 7TM GPCR chemoreceptor Srv [PF10323.11, score=28.3]} {Human: ENSG00000168412, MTNR1A, melatonin receptor 1A, [RH, Score=142, Expect=3e-38]} {Mouse: ENSMUSG00000050901, Mtnr1b, melatonin receptor 1B, [Score=135, Expect=1e-35]; ENSMUSG00000054764, Mtnr1a, melatonin receptor 1A, [Score=134, Expect=1e-35]} {Dmel: FBgn0046687, Tre1, Trapped in endoderm 1, [Score=94.7, Expect=3e-21]} {Celegans: WBGene00004777, ser-2, Tyramine receptor Ser-2, [Score=90.9, Expect=6e-20]} {Smed: dd_Smed_v6_65999_0_1, dd_Smed_v6_65999_0_1, [Score=228, Expect=4e-72]} {RNA1509_59553} {RNA1310_54686} {RNA815_28134}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_11850

1.11

Mlig455_041164

Neo: Int S/G2/M

Age: Up-Down-Down, logFC(26M/2M)=-0.288

Regeneration-upregulated R3: 5.992

Regeneration-enriched R3: 5.992

1.000

Mlig455_041164 {REF} {Length: 1041} {RNA1509_12406} {RNA1310_39718.1} {RNA815_28814.1}

MligTC455_14069

0.23

Mlig455_053172

Neo: -

Age: -

MTNR1A

0.952

Mlig455_053172 {REF} {Length: 5061} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=152.6]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=38.8]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=29.6]; Serpentine type 7TM GPCR chemoreceptor Srv [PF10323.11, score=28.3]} {Human: ENSG00000168412, MTNR1A, melatonin receptor 1A, [RH, Score=142, Expect=3e-38]} {Mouse: ENSMUSG00000050901, Mtnr1b, melatonin receptor 1B, [Score=135, Expect=1e-35]; ENSMUSG00000054764, Mtnr1a, melatonin receptor 1A, [Score=134, Expect=1e-35]} {Dmel: FBgn0046687, Tre1, Trapped in endoderm 1, [Score=94.7, Expect=3e-21]} {Celegans: WBGene00004777, ser-2, Tyramine receptor Ser-2, [Score=90.9, Expect=6e-20]} {Smed: dd_Smed_v6_65999_0_1, dd_Smed_v6_65999_0_1, [Score=228, Expect=4e-72]} {RNA1509_59553} {RNA1310_54686} {RNA815_28134}