TomoSeq data search

Data search

Results for MligTC455_11892

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_11892	72	1.50	Mlig455_019825, Mlig455_051995	Neo: - Age: Down-Down-Up	LRG1	Mlig455_019825 {REF} {Length: 2180} {Pfam: Leucine rich repeat [PF13855.8, score=69.0]; Leucine Rich repeats (2 copies) [PF12799.9, score=38.4]; Leucine Rich Repeat [PF00560.35, score=26.9]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=20.0]} {Human: ENSG00000171236, LRG1, leucine rich alpha-2-glycoprotein 1, [Score=62.8, Expect=4e-10]; ENSG00000133067, LGR6, leucine rich repeat containing G protein-coupled receptor 6, [Score=62.4, Expect=1e-09]} {Mouse: ENSMUSG00000037095, Lrg1, leucine-rich alpha-2-glycoprotein 1, [Score=63.2, Expect=2e-10]} {Dmel: FBgn0085397, Fili, Fish-lips, [Score=55.1, Expect=1e-07]} {Celegans: WBGene00006366, sym-1, SYM-1 protein, [Score=57.4, Expect=1e-08]} {Smed: dd_Smed_v6_3513_0_1, dd_Smed_v6_3513_0_1, [Score=60.5, Expect=9e-10]} {RNA1509_21975} {RNA1310_17389.1} {RNA815_6938} Mlig455_051995 {REF} {Length: 2158} {Pfam: Leucine rich repeat [PF13855.8, score=67.1]; Leucine Rich repeats (2 copies) [PF12799.9, score=39.6]; Leucine Rich Repeat [PF00560.35, score=30.0]; Leucine Rich repeat [PF13516.8, score=20.1]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=19.2]} {Human: ENSG00000171236, LRG1, leucine rich alpha-2-glycoprotein 1, [Score=60.1, Expect=1e-09]} {Mouse: ENSMUSG00000063765, Chadl, chondroadherin-like, [Score=56.2, Expect=4e-08]; ENSMUSG00000044505, Lingo4, leucine rich repeat and Ig domain containing 4, [Score=55.8, Expect=4e-08]; ENSMUSG00000042846, Lrrtm3, leucine rich repeat transmembrane neuronal 3, [Score=54.7, Expect=1e-07]; ENSMUSG00000052316, Lrrc15, leucine rich repeat containing 15, [Score=53.5, Expect=2e-07]; ENSMUSG00000037095, Lrg1, leucine-rich alpha-2-glycoprotein 1, [Score=53.5, Expect=1e-07]} {Dmel: FBgn0085397, Fili, Fish-lips, [Score=53.1, Expect=2e-07]} {Celegans: WBGene00016974, lron-15, ELRR (Extracellular Leucine-Rich Repeat) ONly, [Score=50.4, Expect=1e-06]} {Smed: dd_Smed_v6_3513_0_1, dd_Smed_v6_3513_0_1, [Score=67.0, Expect=4e-12]} {RNA1509_21975} {RNA1310_17389.1} {RNA815_6938}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_11892

1.50

Mlig455_019825, Mlig455_051995

Neo: -

Age: Down-Down-Up

LRG1

Mlig455_019825 {REF} {Length: 2180} {Pfam: Leucine rich repeat [PF13855.8, score=69.0]; Leucine Rich repeats (2 copies) [PF12799.9, score=38.4]; Leucine Rich Repeat [PF00560.35, score=26.9]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=20.0]} {Human: ENSG00000171236, LRG1, leucine rich alpha-2-glycoprotein 1, [Score=62.8, Expect=4e-10]; ENSG00000133067, LGR6, leucine rich repeat containing G protein-coupled receptor 6, [Score=62.4, Expect=1e-09]} {Mouse: ENSMUSG00000037095, Lrg1, leucine-rich alpha-2-glycoprotein 1, [Score=63.2, Expect=2e-10]} {Dmel: FBgn0085397, Fili, Fish-lips, [Score=55.1, Expect=1e-07]} {Celegans: WBGene00006366, sym-1, SYM-1 protein, [Score=57.4, Expect=1e-08]} {Smed: dd_Smed_v6_3513_0_1, dd_Smed_v6_3513_0_1, [Score=60.5, Expect=9e-10]} {RNA1509_21975} {RNA1310_17389.1} {RNA815_6938}

Mlig455_051995 {REF} {Length: 2158} {Pfam: Leucine rich repeat [PF13855.8, score=67.1]; Leucine Rich repeats (2 copies) [PF12799.9, score=39.6]; Leucine Rich Repeat [PF00560.35, score=30.0]; Leucine Rich repeat [PF13516.8, score=20.1]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=19.2]} {Human: ENSG00000171236, LRG1, leucine rich alpha-2-glycoprotein 1, [Score=60.1, Expect=1e-09]} {Mouse: ENSMUSG00000063765, Chadl, chondroadherin-like, [Score=56.2, Expect=4e-08]; ENSMUSG00000044505, Lingo4, leucine rich repeat and Ig domain containing 4, [Score=55.8, Expect=4e-08]; ENSMUSG00000042846, Lrrtm3, leucine rich repeat transmembrane neuronal 3, [Score=54.7, Expect=1e-07]; ENSMUSG00000052316, Lrrc15, leucine rich repeat containing 15, [Score=53.5, Expect=2e-07]; ENSMUSG00000037095, Lrg1, leucine-rich alpha-2-glycoprotein 1, [Score=53.5, Expect=1e-07]} {Dmel: FBgn0085397, Fili, Fish-lips, [Score=53.1, Expect=2e-07]} {Celegans: WBGene00016974, lron-15, ELRR (Extracellular Leucine-Rich Repeat) ONly, [Score=50.4, Expect=1e-06]} {Smed: dd_Smed_v6_3513_0_1, dd_Smed_v6_3513_0_1, [Score=67.0, Expect=4e-12]} {RNA1509_21975} {RNA1310_17389.1} {RNA815_6938}

Cumulative graph for MligTC455_11892

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	7.371	1.258	0.02966	0.44425
RegionR2	-1.72	1.258	1.00000	1.00000
RegionR3	0.84	1.258	0.74984	1.00000
RegionR4	2.718	1.258	0.09222	0.29123
RegionR5	0.026	1.258	0.73217	1.00000
RegionR6	0.846	1.258	0.99711	1.00000
RegionR7	-4.96	1.258	1.00000	1.00000
RegionR8	-5.12	1.258	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-4.049	1.258	0.53231	1.00000
RegenerationR2	3.42	1.258	0.05521	0.38712
RegenerationR3	0.002	1.258	0.82899	0.99040
RegenerationR4	1.057	1.258	0.96150	1.00000
RegenerationR5	-0.141	1.258	0.97875	1.00000
RegenerationR6	-1.764	1.258	0.83061	0.99100
RegenerationBL	6.843	1.258	0.00717	0.08255
RegenerationTP	4.836	1.258	0.26262	0.71058

Genes with expression patterns similar to MligTC455_11892

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_11892	72	1.5	Mlig455_019825, Mlig455_051995	Neo: - Age: Down-Down-Up	LRG1	3	1.000	-	-	1.000	-	1.000	Mlig455_019825 {REF} {Length: 2180} {Pfam: Leucine rich repeat [PF13855.8, score=69.0]; Leucine Rich repeats (2 copies) [PF12799.9, score=38.4]; Leucine Rich Repeat [PF00560.35, score=26.9]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=20.0]} {Human: ENSG00000171236, LRG1, leucine rich alpha-2-glycoprotein 1, [Score=62.8, Expect=4e-10]; ENSG00000133067, LGR6, leucine rich repeat containing G protein-coupled receptor 6, [Score=62.4, Expect=1e-09]} {Mouse: ENSMUSG00000037095, Lrg1, leucine-rich alpha-2-glycoprotein 1, [Score=63.2, Expect=2e-10]} {Dmel: FBgn0085397, Fili, Fish-lips, [Score=55.1, Expect=1e-07]} {Celegans: WBGene00006366, sym-1, SYM-1 protein, [Score=57.4, Expect=1e-08]} {Smed: dd_Smed_v6_3513_0_1, dd_Smed_v6_3513_0_1, [Score=60.5, Expect=9e-10]} {RNA1509_21975} {RNA1310_17389.1} {RNA815_6938} Mlig455_051995 {REF} {Length: 2158} {Pfam: Leucine rich repeat [PF13855.8, score=67.1]; Leucine Rich repeats (2 copies) [PF12799.9, score=39.6]; Leucine Rich Repeat [PF00560.35, score=30.0]; Leucine Rich repeat [PF13516.8, score=20.1]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=19.2]} {Human: ENSG00000171236, LRG1, leucine rich alpha-2-glycoprotein 1, [Score=60.1, Expect=1e-09]} {Mouse: ENSMUSG00000063765, Chadl, chondroadherin-like, [Score=56.2, Expect=4e-08]; ENSMUSG00000044505, Lingo4, leucine rich repeat and Ig domain containing 4, [Score=55.8, Expect=4e-08]; ENSMUSG00000042846, Lrrtm3, leucine rich repeat transmembrane neuronal 3, [Score=54.7, Expect=1e-07]; ENSMUSG00000052316, Lrrc15, leucine rich repeat containing 15, [Score=53.5, Expect=2e-07]; ENSMUSG00000037095, Lrg1, leucine-rich alpha-2-glycoprotein 1, [Score=53.5, Expect=1e-07]} {Dmel: FBgn0085397, Fili, Fish-lips, [Score=53.1, Expect=2e-07]} {Celegans: WBGene00016974, lron-15, ELRR (Extracellular Leucine-Rich Repeat) ONly, [Score=50.4, Expect=1e-06]} {Smed: dd_Smed_v6_3513_0_1, dd_Smed_v6_3513_0_1, [Score=67.0, Expect=4e-12]} {RNA1509_21975} {RNA1310_17389.1} {RNA815_6938}
2.	MligTC455_46585	37	0.76	Mlig455_014468	Neo: - Age: -	FOXL1	0.956	-	-	-	0.956	-	-	Mlig455_014468 {REF} {Length: 1626} {Pfam: Forkhead domain [PF00250.20, score=137.2]} {Human: ENSG00000176678, FOXL1, forkhead box L1, [Score=182, Expect=5e-55]} {Mouse: ENSMUSG00000097084, Foxl1, forkhead box L1, [Score=187, Expect=2e-57]} {Dmel: FBgn0014143, croc, crocodile, [Score=152, Expect=3e-42]} {Celegans: WBGene00004013, pha-4, Defective pharyngeal development protein 4, [Score=145, Expect=2e-40]} {Smed: dd_Smed_v6_19255_0_1, dd_Smed_v6_19255_0_1, [Score=175, Expect=2e-53]} {RNA1310_141907} {RNA815_63830}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts