TomoSeq data search

Data search

Results for MligTC455_11989

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_11989	243	5.06	Mlig455_032056	Neo: - Age: -	ESR1	Mlig455_032056 {REF} {Length: 1429} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=65.9]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=34.1]} {Human: ENSG00000091831, ESR1, estrogen receptor 1, [Score=109, Expect=2e-26]; ENSG00000196482, ESRRG, estrogen related receptor gamma, [Score=108, Expect=2e-25]; ENSG00000123358, NR4A1, nuclear receptor subfamily 4 group A member 1, [Score=107, Expect=2e-24]} {Mouse: ENSMUSG00000023034, Nr4a1, nuclear receptor subfamily 4, group A, member 1, [Score=112, Expect=2e-26]; ENSMUSG00000021255, Esrrb, estrogen related receptor, beta, [Score=111, Expect=5e-27]; ENSMUSG00000026610, Esrrg, estrogen-related receptor gamma, [Score=108, Expect=2e-25]} {Dmel: FBgn0003651, svp, seven up, [Score=102, Expect=2e-23]} {Celegans: WBGene00003628, nhr-35, Nuclear hormone receptor family member nhr-35, [Score=83.6, Expect=3e-17]} {Smed: dd_Smed_v6_12699_0_1, dd_Smed_v6_12699_0_1, [Score=85.1, Expect=9e-18]} {RNA1310_3696.1} {RNA815_21379}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_11989

243

5.06

Mlig455_032056

Neo: -

Age: -

ESR1

Mlig455_032056 {REF} {Length: 1429} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=65.9]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=34.1]} {Human: ENSG00000091831, ESR1, estrogen receptor 1, [Score=109, Expect=2e-26]; ENSG00000196482, ESRRG, estrogen related receptor gamma, [Score=108, Expect=2e-25]; ENSG00000123358, NR4A1, nuclear receptor subfamily 4 group A member 1, [Score=107, Expect=2e-24]} {Mouse: ENSMUSG00000023034, Nr4a1, nuclear receptor subfamily 4, group A, member 1, [Score=112, Expect=2e-26]; ENSMUSG00000021255, Esrrb, estrogen related receptor, beta, [Score=111, Expect=5e-27]; ENSMUSG00000026610, Esrrg, estrogen-related receptor gamma, [Score=108, Expect=2e-25]} {Dmel: FBgn0003651, svp, seven up, [Score=102, Expect=2e-23]} {Celegans: WBGene00003628, nhr-35, Nuclear hormone receptor family member nhr-35, [Score=83.6, Expect=3e-17]} {Smed: dd_Smed_v6_12699_0_1, dd_Smed_v6_12699_0_1, [Score=85.1, Expect=9e-18]} {RNA1310_3696.1} {RNA815_21379}

Cumulative graph for MligTC455_11989

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	2.569	2.759	0.04285	0.50068
RegionR2	0.71	2.759	0.37046	0.76510
RegionR3	0.035	2.759	0.77113	1.00000
RegionR4	0.944	2.759	0.20504	0.48664
RegionR5	1.321	2.759	0.03560	0.14652
RegionR6	-0.566	2.759	0.94458	1.00000
RegionR7	1.036	2.759	0.23525	0.85994
RegionR8	-6.048	2.759	0.02186	0.28849

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-7.9	2.759	0.02926	0.62388
RegenerationR2	-0.225	2.759	0.67214	0.94599
RegenerationR3	0.031	2.759	0.96113	1.00000
RegenerationR4	-0.469	2.759	0.41365	0.82256
RegenerationR5	-0.817	2.759	0.11615	0.51260
RegenerationR6	1.301	2.759	0.05910	0.30517
RegenerationBL	0.841	2.759	0.55505	0.91100
RegenerationTP	2.526	2.759	0.17209	0.60445

Genes with expression patterns similar to MligTC455_11989

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_11989	243	5.06	Mlig455_032056	Neo: - Age: -	ESR1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_032056 {REF} {Length: 1429} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=65.9]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=34.1]} {Human: ENSG00000091831, ESR1, estrogen receptor 1, [Score=109, Expect=2e-26]; ENSG00000196482, ESRRG, estrogen related receptor gamma, [Score=108, Expect=2e-25]; ENSG00000123358, NR4A1, nuclear receptor subfamily 4 group A member 1, [Score=107, Expect=2e-24]} {Mouse: ENSMUSG00000023034, Nr4a1, nuclear receptor subfamily 4, group A, member 1, [Score=112, Expect=2e-26]; ENSMUSG00000021255, Esrrb, estrogen related receptor, beta, [Score=111, Expect=5e-27]; ENSMUSG00000026610, Esrrg, estrogen-related receptor gamma, [Score=108, Expect=2e-25]} {Dmel: FBgn0003651, svp, seven up, [Score=102, Expect=2e-23]} {Celegans: WBGene00003628, nhr-35, Nuclear hormone receptor family member nhr-35, [Score=83.6, Expect=3e-17]} {Smed: dd_Smed_v6_12699_0_1, dd_Smed_v6_12699_0_1, [Score=85.1, Expect=9e-18]} {RNA1310_3696.1} {RNA815_21379}
2.	MligTC455_43053	588	12.24	Mlig455_040895	Neo: - Age: logFC(26M/2M)=-0.777 Region-enriched R4: 1.592/0.03527	PGP	1.703	-	-	-	0.749	-	0.954	Mlig455_040895 {REF} {Length: 1190} {TRANSSPLICED} {Pfam: Haloacid dehalogenase-like hydrolase [PF13344.8, score=96.1]; HAD-hyrolase-like [PF13242.8, score=65.6]; haloacid dehalogenase-like hydrolase [PF00702.28, score=25.9]; Haloacid dehalogenase-like hydrolase [PF13419.8, score=24.0]} {Human: ENSG00000184207, PGP, phosphoglycolate phosphatase, [RH, Score=146, Expect=5e-41]} {Mouse: ENSMUSG00000043445, Pgp, phosphoglycolate phosphatase, [RH, Score=150, Expect=1e-42]} {Dmel: FBgn0036760, CG5567, [RH, Score=130, Expect=3e-35]} {Celegans: WBGene00016892, C53A3.2, [RH, Score=164, Expect=8e-48]} {Smed: dd_Smed_v6_11063_0_1, dd_Smed_v6_11063_0_1, [RH, Score=179, Expect=2e-54]} {RNA1509_23273, RNA1509_46294} {RNA1310_29251, RNA1509_23273, RNA1509_46294} {RNA1509_23273, RNA1509_46294, RNA815_13107.1}
3.	MligTC455_35820	87	1.81	Mlig455_017434	Neo: - Age: -		0.956	-	0.956	-	-	-	-	Mlig455_017434 {REF} {Length: 1476} {TRANSSPLICED} {RNA1310_42117} {RNA815_18951.1}
4.	MligTC455_42802	254	5.28	Mlig455_050145	Neo: - Age: Up-Down-Down	SV2A	0.956	-	-	-	-	-	0.956	Mlig455_050145 {REF} {Length: 6496} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=109.4]; Sugar (and other) transporter [PF00083.26, score=98.5]} {Human: ENSG00000159164, SV2A, synaptic vesicle glycoprotein 2A, [Score=184, Expect=4e-50]; ENSG00000185518, SV2B, synaptic vesicle glycoprotein 2B, [Score=183, Expect=3e-50]} {Mouse: ENSMUSG00000053025, Sv2b, synaptic vesicle glycoprotein 2 b, [Score=215, Expect=6e-62]} {Dmel: FBgn0029896, CG3168, [RH, Score=285, Expect=5e-89]} {Celegans: WBGene00009729, F45E10.2, [Score=73.2, Expect=1e-13]} {Smed: dd_Smed_v6_3645_0_1, dd_Smed_v6_3645_0_1, [Score=150, Expect=9e-40]} {RNA1509_24097} {RNA1310_8651} {RNA815_5833}
5.	MligTC455_22311	74	1.53	Mlig455_001822	Neo: - Age: -		0.951	-	0.951	-	-	-	-	Mlig455_001822 {REF} {Length: 1911} {RNA1310_30832} {RNA815_15518}