Data search
Results for MligTC455_12079
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_12079 | 47 | 0.97 | Mlig455_041734 | Neo: - Age: - |
Mlig455_041734 {REF} {Length: 871} {Smed: dd_Smed_v6_9974_1_8, dd_Smed_v6_9974_1_8, [Score=51.2, Expect=2e-07]} {RNA1509_8360} {RNA1310_8325.1} {RNA815_1671.1} |
Cumulative graph for MligTC455_12079
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.628 | 1.136 | 0.99962 | 1.00000 | |
| RegionR2 | 2.31 | 1.136 | 0.38130 | 0.77590 | |
| RegionR3 | -1.088 | 1.136 | 0.97539 | 1.00000 | |
| RegionR4 | 0.018 | 1.136 | 0.61768 | 0.92814 | |
| RegionR5 | -1.426 | 1.136 | 0.96149 | 1.00000 | |
| RegionR6 | -1.073 | 1.136 | 0.91710 | 1.00000 | |
| RegionR7 | -0.266 | 1.136 | 0.99969 | 1.00000 | |
| RegionR8 | 0.895 | 1.136 | 0.99965 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.165 | 1.136 | 0.95091 | 1.00000 | |
| RegenerationR2 | 0.475 | 1.136 | 0.78639 | 0.98526 | |
| RegenerationR3 | 1.666 | 1.136 | 0.44151 | 0.82773 | |
| RegenerationR4 | -0.402 | 1.136 | 0.78647 | 0.98261 | |
| RegenerationR5 | 2.06 | 1.136 | 0.24597 | 0.67904 | |
| RegenerationR6 | 2.467 | 1.136 | 0.26219 | 0.61228 | |
| RegenerationBL | 1.111 | 1.136 | 0.54609 | 0.90327 | |
| RegenerationTP | 0.004 | 1.136 | 0.73837 | 1.00000 |
Genes with expression patterns similar to MligTC455_12079
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_12079 | 47 | 0.97 | Mlig455_041734 | Neo: - Age: - |
1 | - | - | - | - | 1.000 | - | Mlig455_041734 {REF} {Length: 871} {Smed: dd_Smed_v6_9974_1_8, dd_Smed_v6_9974_1_8, [Score=51.2, Expect=2e-07]} {RNA1509_8360} {RNA1310_8325.1} {RNA815_1671.1} | |
| 2. | MligTC455_31804 | 143 | 2.99 | Mlig455_059782 | Neo: - Age: logFC(26M/2M)=-0.656 |
EFCAB6 | 0.972 | - | - | - | - | 0.972 | - | Mlig455_059782 {REF} {Length: 4682} {TRANSSPLICED} {Pfam: EF-hand domain pair [PF13499.8, score=81.1]; EF-hand domain [PF08976.13, score=68.9]; EF-hand domain pair [PF13833.8, score=64.1]; EF-hand domain [PF13405.8, score=57.5]; EF hand [PF00036.34, score=53.3]; EF-hand domain [PF14658.8, score=35.8]; Family of unknown function (DUF5580) [PF17743.3, score=27.6]; EF hand [PF13202.8, score=22.4]} {Human: ENSG00000186976, EFCAB6, EF-hand calcium binding domain 6, [Score=91.3, Expect=7e-18]} {Mouse: ENSMUSG00000022441, Efcab6, EF-hand calcium binding domain 6, [Score=75.9, Expect=2e-13]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=49.7, Expect=1e-06]} {Celegans: WBGene00017394, cal-8, CALmodulin related genes, [Score=50.8, Expect=4e-07]} {Smed: dd_Smed_v6_20435_0_1, dd_Smed_v6_20435_0_1, [Score=157, Expect=1e-40]} {RNA1509_11692} {RNA1310_3239.1} {RNA815_3758} |
| 3. | MligTC455_16196 | 54 | 1.12 | Mlig455_040106 | Neo: - Age: - |
0.961 | - | - | - | - | 0.961 | - | Mlig455_040106 {REF} {Length: 857} {NoTransDecoderORF} {RNA1509_33264} {RNA1310_118043} {RNA815_55800} | |
| 4. | MligTC455_41989 | 272 | 5.66 | Mlig455_042581 | Neo: - |
0.96 | - | - | - | - | 0.960 | - | Mlig455_042581 {REF} {Length: 1911} {RNA1509_14858, RNA1509_2543} {RNA1310_14712, RNA1509_14858} {RNA1509_14858, RNA815_7645.1} | |
| 5. | MligTC455_52566 | 265 | 5.51 | Mlig455_052680 | Neo: - Age: - |
SEH1L | 0.96 | - | - | - | - | 0.960 | - | Mlig455_052680 {REF} {Length: 3191} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=57.7]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=26.7]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=21.8]} {Human: ENSG00000085415, SEH1L, SEH1 like nucleoporin, [RH, Score=301, Expect=4e-99]} {Mouse: ENSMUSG00000079614, Seh1l, SEH1-like (S. cerevisiae, [RH, Score=301, Expect=2e-99]} {Dmel: FBgn0033247, Nup44A, Nucleoporin at 44A, [RH, Score=260, Expect=1e-83]} {Celegans: WBGene00003804, npp-18, Nucleoporin SEH1, [RH, Score=216, Expect=1e-66]} {Smed: dd_Smed_v6_1922_0_1, dd_Smed_v6_1922_0_1, [RH, Score=246, Expect=3e-78]} {RNA1509_11782, RNA1509_33925} {RNA1310_12230.1, RNA1509_33925} {RNA1509_33925, RNA815_5598.1} |
| 6. | MligTC455_16294 | 7986 | 166.37 | Mlig455_035162 | Neo: - Age: - |
SLC6A5 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_035162 {REF} {Length: 3277} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=611.3]} {Human: ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=535, Expect=2e-180]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=534, Expect=4e-180]} {Dmel: FBgn0034911, CG5549, [RH, Score=545, Expect=6e-180]} {Celegans: WBGene00004910, snf-11, Transporter, [Score=408, Expect=6e-134]} {Smed: dd_Smed_v6_10458_0_2, dd_Smed_v6_10458_0_2, [Score=550, Expect=0.0]} {RNA1509_1254, RNA1509_2794} {RNA1310_4868.1, RNA1509_1254, RNA1509_2794} {RNA1509_1254, RNA1509_2794, RNA815_1490.1} |
| 7. | MligTC455_29957 | 233 | 4.86 | Mlig455_044866 | Neo: - Age: logFC(26M/2M)=0.570 |
FBXL13 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_044866 {REF} {Length: 6247} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=46.5]; Leucine Rich repeat [PF13516.8, score=31.3]; F-box domain [PF00646.35, score=27.9]} {Human: ENSG00000161040, FBXL13, F-box and leucine rich repeat protein 13, [Score=58.5, Expect=3e-08]} {Mouse: ENSMUSG00000032507, Fbxl2, F-box and leucine-rich repeat protein 2, [Score=52.8, Expect=1e-06]} {Dmel: FBgn0033639, CG9003, [Score=50.8, Expect=3e-06]} {RNA1509_47948} {RNA1310_19038, RNA1509_47948} {RNA1509_47948, RNA815_23529} |
| 8. | MligTC455_29376 | 74 | 1.54 | Mlig455_005795 | Neo: - Age: Down-Down-Down |
0.957 | - | - | - | - | 0.957 | - | Mlig455_005795 {REF} {Length: 8723} {RNA1509_34218} {RNA1310_18727} {RNA815_16176.1} | |
| 9. | MligTC455_22582 | 361 | 7.53 | Mlig455_003201 | Neo: - Age: - |
0.956 | - | - | - | - | 0.956 | - | Mlig455_003201 {REF} {Length: 2468} {TRANSSPLICED} {Pfam: Universal stress protein family [PF00582.28, score=97.6]} {Smed: dd_Smed_v6_3388_0_1, dd_Smed_v6_3388_0_1, [RH, Score=111, Expect=2e-31]} {RNA1509_26264, RNA1509_38460, RNA1509_39840} {RNA1310_38517.1, RNA1509_26264, RNA1509_38460, RNA1509_39840} {RNA1509_26264, RNA1509_38460, RNA1509_39840, RNA815_12487} | |
| 10. | MligTC455_28438 | 16 | 0.34 | Mlig455_070729 | Neo: - Age: Down-Up-Down |
0.956 | - | - | - | - | 0.956 | - | Mlig455_070729 {REF} {Length: 1690} {NoTransDecoderORF} {RNA1509_25886} {RNA1310_11504.1} {RNA815_17069.1} | |
| 11. | MligTC455_53789 | 8 | 0.17 | Mlig455_046935 | Neo: - Age: - |
MPDZ | 0.952 | - | - | - | - | 0.952 | - | Mlig455_046935 {REF} {Length: 6838} {Pfam: PDZ domain [PF00595.26, score=249.0]; PDZ domain [PF17820.3, score=147.0]; PDZ domain [PF13180.8, score=88.6]} {Human: ENSG00000107186, MPDZ, multiple PDZ domain crumbs cell polarity complex component, [Score=265, Expect=6e-71]} {Mouse: ENSMUSG00000028402, Mpdz, multiple PDZ domain protein, [Score=260, Expect=1e-69]} {Dmel: FBgn0067864, Patj, [RH, Score=235, Expect=1e-63]} {Celegans: WBGene00003404, mpz-1, Multiple PDZ domain protein, [Score=163, Expect=5e-40]} {Smed: dd_Smed_v6_6739_0_1, dd_Smed_v6_6739_0_1, [Score=230, Expect=8e-62]} {RNA1509_27260} {RNA1310_504} {RNA815_9118} |
Berezikov Lab - 2020-2021 © ERIBA